RNA–Protein interactions for RNA: ENST00000279281.7

VPS51-201, Transcript of VPS51, GARP complex subunit, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS51, Length 2,714 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-201ENST00000279281 NISCHQ9Y2I1 1504 aa36.46■■■■□ 3.43
VPS51-201ENST00000279281 CCDC180Q9P1Z9 1646 aa31.3■■■□□ 2.6
VPS51-201ENST00000279281 SHROOM4Q9ULL8 1493 aa30.8■■■□□ 2.52
VPS51-201ENST00000279281 ZCCHC6Q5VYS8 1495 aaKnown RBP30.76■■■□□ 2.51
VPS51-201ENST00000279281 SUPT5HO00267 1087 aaKnown RBP30.3■■■□□ 2.44
VPS51-201ENST00000279281 DCAF8L2P0C7V8 631 aa30.18■■■□□ 2.42
VPS51-201ENST00000279281 DCAF1Q9Y4B6 1507 aa29.97■■■□□ 2.39
VPS51-201ENST00000279281 CHIC1Q5VXU3 224 aa29.33■■■□□ 2.29
VPS51-201ENST00000279281 MYO15BQ96JP2 1530 aa29.33■■■□□ 2.29
VPS51-201ENST00000279281 ABCC9O60706 1549 aa29.32■■■□□ 2.28
VPS51-201ENST00000279281 SCRIBQ14160 1630 aa29.16■■■□□ 2.26
VPS51-201ENST00000279281 NACADO15069 1562 aa29.02■■■□□ 2.24
VPS51-201ENST00000279281 PCGF6Q9BYE7 350 aa28.87■■■□□ 2.21
VPS51-201ENST00000279281 HRCP23327 699 aa28.79■■■□□ 2.2
VPS51-201ENST00000279281 LOC105371045A0A1W2PR82 267 aa28.71■■■□□ 2.19
VPS51-201ENST00000279281 RB1CC1Q8TDY2 1594 aa28.65■■■□□ 2.18
VPS51-201ENST00000279281 RSF1Q96T23 1441 aaPredicted RBP28.63■■■□□ 2.17
VPS51-201ENST00000279281 PPARGC1BQ86YN6 1023 aaKnown RBP28.49■■■□□ 2.15
VPS51-201ENST00000279281 CECR2Q9BXF3 1484 aa28.45■■■□□ 2.15
VPS51-201ENST00000279281 MROH2BQ7Z745 1585 aa28.31■■■□□ 2.12
VPS51-201ENST00000279281 UNC13AQ9UPW8 1703 aa28.26■■■□□ 2.12
VPS51-201ENST00000279281 WIZO95785 1651 aa28.14■■■□□ 2.09
VPS51-201ENST00000279281 FAM9AQ8IZU1 332 aaPredicted RBP28.08■■■□□ 2.09
VPS51-201ENST00000279281 EHMT2Q96KQ7 1210 aa28.06■■■□□ 2.08
VPS51-201ENST00000279281 BAZ1AQ9NRL2 1556 aaPredicted RBP28.04■■■□□ 2.08
VPS51-201ENST00000279281 TRIM41Q8WV44 630 aa28.03■■■□□ 2.08
VPS51-201ENST00000279281 TRIM26Q12899 539 aaPredicted RBP28■■■□□ 2.07
VPS51-201ENST00000279281 BICRAQ9NZM4 1560 aa27.92■■■□□ 2.06
VPS51-201ENST00000279281 SMARCA4P51532 1647 aa27.89■■■□□ 2.06
VPS51-201ENST00000279281 PABPN1Q86U42 306 aaKnown RBP eCLIP27.89■■■□□ 2.05
VPS51-201ENST00000279281 TOP2AP11388 1531 aaKnown RBP27.7■■■□□ 2.02
VPS51-201ENST00000279281 EIF4G1Q04637 1599 aaKnown RBP27.59■■■□□ 2.01
VPS51-201ENST00000279281 CCDC88BA6NC98 1476 aa27.55■■■□□ 2
VPS51-201ENST00000279281 SMARCA2P51531 1590 aa27.54■■■□□ 2
VPS51-201ENST00000279281 PEG3Q9GZU2 1588 aa27.42■■□□□ 1.98
VPS51-201ENST00000279281 ZEB1P37275 1124 aaPredicted RBP27.32■■□□□ 1.96
VPS51-201ENST00000279281 ABCC8Q09428 1581 aa27.29■■□□□ 1.96
VPS51-201ENST00000279281 ATAD2BQ9ULI0 1458 aa27.28■■□□□ 1.96
VPS51-201ENST00000279281 TTBK1Q5TCY1 1321 aaPredicted RBP27.17■■□□□ 1.94
VPS51-201ENST00000279281 BAZ1BQ9UIG0 1483 aaKnown RBP27.15■■□□□ 1.94
VPS51-201ENST00000279281 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.1■■□□□ 1.93
VPS51-201ENST00000279281 CCER1Q8TC90 406 aaPredicted RBP26.96■■□□□ 1.91
VPS51-201ENST00000279281 SOGA1O94964 1423 aa26.92■■□□□ 1.9
VPS51-201ENST00000279281 WRNQ14191 1432 aaPredicted RBP eCLIP26.89■■□□□ 1.9
VPS51-201ENST00000279281 NCAPD3P42695 1498 aa26.85■■□□□ 1.89
VPS51-201ENST00000279281 RUSC2Q8N2Y8 1516 aa26.83■■□□□ 1.89
VPS51-201ENST00000279281 HMGXB3Q12766 1538 aa26.82■■□□□ 1.88
VPS51-201ENST00000279281 SYNJ1O43426 1573 aa26.82■■□□□ 1.88
VPS51-201ENST00000279281 SCAF1Q9H7N4 1312 aaKnown RBP26.8■■□□□ 1.88
VPS51-201ENST00000279281 UBTFP17480 764 aaKnown RBP26.74■■□□□ 1.87
VPS51-201ENST00000279281 CEP162Q5TB80 1403 aa26.73■■□□□ 1.87
VPS51-201ENST00000279281 EEA1Q15075 1411 aa26.7■■□□□ 1.86
VPS51-201ENST00000279281 PELP1Q8IZL8 1130 aaKnown RBP26.68■■□□□ 1.86
VPS51-201ENST00000279281 CSRNP3Q8WYN3 585 aa26.68■■□□□ 1.86
VPS51-201ENST00000279281 TNIKQ9UKE5 1360 aa26.55■■□□□ 1.84
VPS51-201ENST00000279281 TOP2BQ02880 1626 aa26.54■■□□□ 1.84
VPS51-201ENST00000279281 DIEXFQ68CQ4 756 aaKnown RBP26.5■■□□□ 1.83
VPS51-201ENST00000279281 GOLGA3Q08378 1498 aa26.49■■□□□ 1.83
VPS51-201ENST00000279281 CFTRP13569 1480 aa26.48■■□□□ 1.83
VPS51-201ENST00000279281 BIVM-ERCC5R4GMW8 1640 aa26.48■■□□□ 1.83
VPS51-201ENST00000279281 CC2D2AQ9P2K1 1620 aa26.45■■□□□ 1.83
VPS51-201ENST00000279281 RANGAP1P46060 587 aaPredicted RBP26.45■■□□□ 1.82
VPS51-201ENST00000279281 NEUROD1Q13562 356 aa26.44■■□□□ 1.82
VPS51-201ENST00000279281 KIF21BO75037 1637 aa26.4■■□□□ 1.82
VPS51-201ENST00000279281 CEP164Q9UPV0 1460 aa26.39■■□□□ 1.82
VPS51-201ENST00000279281 CUX1P39880 1505 aa26.39■■□□□ 1.82
VPS51-201ENST00000279281 HNRNPUL2Q1KMD3 747 aaKnown RBP26.37■■□□□ 1.81
VPS51-201ENST00000279281 ACIN1Q9UKV3 1341 aaKnown RBP26.36■■□□□ 1.81
VPS51-201ENST00000279281 PRDM2Q13029 1718 aa26.3■■□□□ 1.8
VPS51-201ENST00000279281 RAPGEF2Q9Y4G8 1499 aa26.3■■□□□ 1.8
VPS51-201ENST00000279281 CADPSQ9ULU8 1353 aa26.27■■□□□ 1.8
VPS51-201ENST00000279281 GTF3C3Q9Y5Q9 886 aa26.2■■□□□ 1.79
VPS51-201ENST00000279281 CLIP1P30622 1438 aa26.18■■□□□ 1.78
VPS51-201ENST00000279281 ZNF316A6NFI3 1004 aaPredicted RBP26.15■■□□□ 1.78
VPS51-201ENST00000279281 YTHDC1Q96MU7 727 aaKnown RBP26.14■■□□□ 1.77
VPS51-201ENST00000279281 PRXQ9BXM0 1461 aa26.13■■□□□ 1.77
VPS51-201ENST00000279281 CENPBP07199 599 aaPredicted RBP26.13■■□□□ 1.77
VPS51-201ENST00000279281 APLP2Q06481 763 aa26.09■■□□□ 1.77
VPS51-201ENST00000279281 KIF27Q86VH2 1401 aa26.09■■□□□ 1.77
VPS51-201ENST00000279281 ERICH3Q5RHP9 1530 aa26.07■■□□□ 1.76
VPS51-201ENST00000279281 VPS8Q8N3P4 1428 aa26.02■■□□□ 1.76
VPS51-201ENST00000279281 FANCD2Q9BXW9 1451 aa26.01■■□□□ 1.75
VPS51-201ENST00000279281 NESP48681 1621 aa26■■□□□ 1.75
VPS51-201ENST00000279281 FGD5Q6ZNL6 1462 aa25.99■■□□□ 1.75
VPS51-201ENST00000279281 MIER1Q8N108 512 aa25.96■■□□□ 1.75
VPS51-201ENST00000279281 CUX2O14529 1486 aa25.96■■□□□ 1.75
VPS51-201ENST00000279281 DNAJC5BQ9UF47 199 aa25.9■■□□□ 1.74
VPS51-201ENST00000279281 IGF1RP08069 1367 aa25.88■■□□□ 1.73
VPS51-201ENST00000279281 ARAP1Q96P48 1450 aa25.84■■□□□ 1.73
VPS51-201ENST00000279281 DNMBPQ6XZF7 1577 aa25.83■■□□□ 1.73
VPS51-201ENST00000279281 KANK4Q5T7N3 995 aaPredicted RBP25.8■■□□□ 1.72
VPS51-201ENST00000279281 TOPBP1Q92547 1522 aa25.8■■□□□ 1.72
VPS51-201ENST00000279281 LAMC3Q9Y6N6 1575 aa25.79■■□□□ 1.72
VPS51-201ENST00000279281 RAD54L2Q9Y4B4 1467 aa25.78■■□□□ 1.72
VPS51-201ENST00000279281 POLA1P09884 1462 aaPredicted RBP25.76■■□□□ 1.71
VPS51-201ENST00000279281 CARMIL1Q5VZK9 1371 aa25.74■■□□□ 1.71
VPS51-201ENST00000279281 ARHGAP35Q9NRY4 1499 aa25.7■■□□□ 1.71
VPS51-201ENST00000279281 MYT1Q01538 1121 aa25.7■■□□□ 1.7
VPS51-201ENST00000279281 URB2Q14146 1524 aaKnown RBP25.69■■□□□ 1.7
VPS51-201ENST00000279281 ABCA10Q8WWZ4 1543 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms