RNA–Protein interactions for RNA: ENST00000381527.7

CDK8-201, Transcript of cyclin dependent kinase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK8, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK8-201ENST00000381527 NISCHQ9Y2I1 1504 aa35.8■■■■□ 3.32
CDK8-201ENST00000381527 SHROOM4Q9ULL8 1493 aa30.84■■■□□ 2.53
CDK8-201ENST00000381527 DCAF8L2P0C7V8 631 aa30.36■■■□□ 2.45
CDK8-201ENST00000381527 CCDC180Q9P1Z9 1646 aa30.35■■■□□ 2.45
CDK8-201ENST00000381527 ZCCHC6Q5VYS8 1495 aaKnown RBP30.18■■■□□ 2.42
CDK8-201ENST00000381527 SUPT5HO00267 1087 aaKnown RBP30.13■■■□□ 2.41
CDK8-201ENST00000381527 DCAF1Q9Y4B6 1507 aa29.14■■■□□ 2.26
CDK8-201ENST00000381527 CHIC1Q5VXU3 224 aa28.94■■■□□ 2.22
CDK8-201ENST00000381527 ABCC9O60706 1549 aa28.79■■■□□ 2.2
CDK8-201ENST00000381527 SCRIBQ14160 1630 aa28.77■■■□□ 2.2
CDK8-201ENST00000381527 MYO15BQ96JP2 1530 aa28.76■■■□□ 2.19
CDK8-201ENST00000381527 RSF1Q96T23 1441 aaPredicted RBP28.32■■■□□ 2.12
CDK8-201ENST00000381527 LOC105371045A0A1W2PR82 267 aa28.27■■■□□ 2.12
CDK8-201ENST00000381527 NACADO15069 1562 aa28.21■■■□□ 2.11
CDK8-201ENST00000381527 CECR2Q9BXF3 1484 aa28.11■■■□□ 2.09
CDK8-201ENST00000381527 RB1CC1Q8TDY2 1594 aa28.02■■■□□ 2.08
CDK8-201ENST00000381527 PCGF6Q9BYE7 350 aa27.98■■■□□ 2.07
CDK8-201ENST00000381527 HRCP23327 699 aa27.95■■■□□ 2.07
CDK8-201ENST00000381527 FAM9AQ8IZU1 332 aaPredicted RBP27.93■■■□□ 2.06
CDK8-201ENST00000381527 TRIM41Q8WV44 630 aa27.93■■■□□ 2.06
CDK8-201ENST00000381527 MROH2BQ7Z745 1585 aa27.92■■■□□ 2.06
CDK8-201ENST00000381527 EHMT2Q96KQ7 1210 aa27.9■■■□□ 2.06
CDK8-201ENST00000381527 WIZO95785 1651 aa27.77■■■□□ 2.04
CDK8-201ENST00000381527 PABPN1Q86U42 306 aaKnown RBP eCLIP27.63■■■□□ 2.01
CDK8-201ENST00000381527 PPARGC1BQ86YN6 1023 aaKnown RBP27.51■■□□□ 1.99
CDK8-201ENST00000381527 BAZ1AQ9NRL2 1556 aaPredicted RBP27.49■■□□□ 1.99
CDK8-201ENST00000381527 UNC13AQ9UPW8 1703 aa27.45■■□□□ 1.98
CDK8-201ENST00000381527 SMARCA4P51532 1647 aa27.31■■□□□ 1.96
CDK8-201ENST00000381527 TRIM26Q12899 539 aaPredicted RBP27.28■■□□□ 1.96
CDK8-201ENST00000381527 CCDC88BA6NC98 1476 aa27.2■■□□□ 1.94
CDK8-201ENST00000381527 TOP2AP11388 1531 aaKnown RBP27.19■■□□□ 1.94
CDK8-201ENST00000381527 ABCC8Q09428 1581 aa27.15■■□□□ 1.94
CDK8-201ENST00000381527 BICRAQ9NZM4 1560 aa27.14■■□□□ 1.93
CDK8-201ENST00000381527 SMARCA2P51531 1590 aa27.08■■□□□ 1.93
CDK8-201ENST00000381527 EIF4G1Q04637 1599 aaKnown RBP27.06■■□□□ 1.92
CDK8-201ENST00000381527 TTBK1Q5TCY1 1321 aaPredicted RBP26.88■■□□□ 1.89
CDK8-201ENST00000381527 SOGA1O94964 1423 aa26.86■■□□□ 1.89
CDK8-201ENST00000381527 RUSC2Q8N2Y8 1516 aa26.76■■□□□ 1.87
CDK8-201ENST00000381527 UBTFP17480 764 aaKnown RBP26.73■■□□□ 1.87
CDK8-201ENST00000381527 ATAD2BQ9ULI0 1458 aa26.72■■□□□ 1.87
CDK8-201ENST00000381527 BAZ1BQ9UIG0 1483 aaKnown RBP26.68■■□□□ 1.86
CDK8-201ENST00000381527 CSRNP3Q8WYN3 585 aa26.67■■□□□ 1.86
CDK8-201ENST00000381527 WRNQ14191 1432 aaPredicted RBP eCLIP26.64■■□□□ 1.86
CDK8-201ENST00000381527 PEG3Q9GZU2 1588 aa26.62■■□□□ 1.85
CDK8-201ENST00000381527 CEP162Q5TB80 1403 aa26.56■■□□□ 1.84
CDK8-201ENST00000381527 ZEB1P37275 1124 aaPredicted RBP26.53■■□□□ 1.84
CDK8-201ENST00000381527 RANGAP1P46060 587 aaPredicted RBP26.52■■□□□ 1.84
CDK8-201ENST00000381527 SYNJ1O43426 1573 aa26.49■■□□□ 1.83
CDK8-201ENST00000381527 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.48■■□□□ 1.83
CDK8-201ENST00000381527 TNIKQ9UKE5 1360 aa26.44■■□□□ 1.82
CDK8-201ENST00000381527 EEA1Q15075 1411 aa26.41■■□□□ 1.82
CDK8-201ENST00000381527 GOLGA3Q08378 1498 aa26.35■■□□□ 1.81
CDK8-201ENST00000381527 CCER1Q8TC90 406 aaPredicted RBP26.33■■□□□ 1.81
CDK8-201ENST00000381527 CEP164Q9UPV0 1460 aa26.21■■□□□ 1.79
CDK8-201ENST00000381527 RAPGEF2Q9Y4G8 1499 aa26.17■■□□□ 1.78
CDK8-201ENST00000381527 NCAPD3P42695 1498 aa26.16■■□□□ 1.78
CDK8-201ENST00000381527 CLIP1P30622 1438 aa26.14■■□□□ 1.77
CDK8-201ENST00000381527 TOP2BQ02880 1626 aa26.08■■□□□ 1.76
CDK8-201ENST00000381527 HMGXB3Q12766 1538 aa26.07■■□□□ 1.76
CDK8-201ENST00000381527 KIF21BO75037 1637 aa26.06■■□□□ 1.76
CDK8-201ENST00000381527 HNRNPUL2Q1KMD3 747 aaKnown RBP26.04■■□□□ 1.76
CDK8-201ENST00000381527 SCAF1Q9H7N4 1312 aaKnown RBP26.03■■□□□ 1.76
CDK8-201ENST00000381527 APLP2Q06481 763 aa26.01■■□□□ 1.75
CDK8-201ENST00000381527 CUX1P39880 1505 aa25.98■■□□□ 1.75
CDK8-201ENST00000381527 BIVM-ERCC5R4GMW8 1640 aa25.92■■□□□ 1.74
CDK8-201ENST00000381527 CFTRP13569 1480 aa25.92■■□□□ 1.74
CDK8-201ENST00000381527 VPS8Q8N3P4 1428 aa25.9■■□□□ 1.74
CDK8-201ENST00000381527 KIF27Q86VH2 1401 aa25.82■■□□□ 1.72
CDK8-201ENST00000381527 PRXQ9BXM0 1461 aa25.79■■□□□ 1.72
CDK8-201ENST00000381527 CADPSQ9ULU8 1353 aa25.76■■□□□ 1.71
CDK8-201ENST00000381527 CC2D2AQ9P2K1 1620 aa25.74■■□□□ 1.71
CDK8-201ENST00000381527 CUX2O14529 1486 aa25.71■■□□□ 1.71
CDK8-201ENST00000381527 KANK4Q5T7N3 995 aaPredicted RBP25.7■■□□□ 1.71
CDK8-201ENST00000381527 ERICH3Q5RHP9 1530 aa25.67■■□□□ 1.7
CDK8-201ENST00000381527 ARAP1Q96P48 1450 aa25.67■■□□□ 1.7
CDK8-201ENST00000381527 DIEXFQ68CQ4 756 aaKnown RBP25.62■■□□□ 1.69
CDK8-201ENST00000381527 NEUROD1Q13562 356 aa25.62■■□□□ 1.69
CDK8-201ENST00000381527 PELP1Q8IZL8 1130 aaKnown RBP25.61■■□□□ 1.69
CDK8-201ENST00000381527 ACIN1Q9UKV3 1341 aaKnown RBP25.61■■□□□ 1.69
CDK8-201ENST00000381527 FGD5Q6ZNL6 1462 aa25.6■■□□□ 1.69
CDK8-201ENST00000381527 IGF1RP08069 1367 aa25.59■■□□□ 1.69
CDK8-201ENST00000381527 NESP48681 1621 aa25.56■■□□□ 1.68
CDK8-201ENST00000381527 P3H3Q8IVL6 736 aa25.56■■□□□ 1.68
CDK8-201ENST00000381527 ITGAEP38570 1179 aa25.55■■□□□ 1.68
CDK8-201ENST00000381527 FANCD2Q9BXW9 1451 aa25.54■■□□□ 1.68
CDK8-201ENST00000381527 CARMIL1Q5VZK9 1371 aa25.51■■□□□ 1.67
CDK8-201ENST00000381527 PRDM2Q13029 1718 aa25.51■■□□□ 1.67
CDK8-201ENST00000381527 DNAJC5BQ9UF47 199 aa25.51■■□□□ 1.67
CDK8-201ENST00000381527 ARHGAP35Q9NRY4 1499 aa25.5■■□□□ 1.67
CDK8-201ENST00000381527 ATP1B4Q9UN42 357 aaPredicted RBP25.5■■□□□ 1.67
CDK8-201ENST00000381527 RAD54L2Q9Y4B4 1467 aa25.47■■□□□ 1.67
CDK8-201ENST00000381527 ZNF316A6NFI3 1004 aaPredicted RBP25.41■■□□□ 1.66
CDK8-201ENST00000381527 GTF3C3Q9Y5Q9 886 aa25.38■■□□□ 1.65
CDK8-201ENST00000381527 CENPBP07199 599 aaPredicted RBP25.35■■□□□ 1.65
CDK8-201ENST00000381527 POLA1P09884 1462 aaPredicted RBP25.31■■□□□ 1.64
CDK8-201ENST00000381527 TOPBP1Q92547 1522 aa25.31■■□□□ 1.64
CDK8-201ENST00000381527 DNMBPQ6XZF7 1577 aa25.25■■□□□ 1.63
CDK8-201ENST00000381527 CCNB3Q8WWL7 1395 aa25.24■■□□□ 1.63
CDK8-201ENST00000381527 TDRD9Q8NDG6 1382 aaKnown RBP25.24■■□□□ 1.63
CDK8-201ENST00000381527 YTHDC1Q96MU7 727 aaKnown RBP25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms