RNA–Protein interactions for RNA: ENST00000359074.8

SNHG11-201, Transcript of small nucleolar RNA host gene 11, humanhuman

TSL 1 (best) BASIC

Gene SNHG11, Length 1,031 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG11-201ENST00000359074 NISCHQ9Y2I1 1504 aa40.51■■■■■ 4.08
SNHG11-201ENST00000359074 ABCC9O60706 1549 aa36.18■■■■□ 3.38
SNHG11-201ENST00000359074 CCDC180Q9P1Z9 1646 aa36.17■■■■□ 3.38
SNHG11-201ENST00000359074 RB1CC1Q8TDY2 1594 aa34.43■■■■□ 3.1
SNHG11-201ENST00000359074 DCAF8L2P0C7V8 631 aa34.29■■■■□ 3.08
SNHG11-201ENST00000359074 NACADO15069 1562 aa34.23■■■■□ 3.07
SNHG11-201ENST00000359074 DNAJC5BQ9UF47 199 aa33.89■■■■□ 3.02
SNHG11-201ENST00000359074 MYO15BQ96JP2 1530 aa33.8■■■■□ 3
SNHG11-201ENST00000359074 PABPN1Q86U42 306 aaKnown RBP eCLIP33.79■■■■□ 3
SNHG11-201ENST00000359074 ZCCHC6Q5VYS8 1495 aaKnown RBP33.58■■■□□ 2.97
SNHG11-201ENST00000359074 UNC13AQ9UPW8 1703 aa33.57■■■□□ 2.96
SNHG11-201ENST00000359074 BICRAQ9NZM4 1560 aa33.43■■■□□ 2.94
SNHG11-201ENST00000359074 DCAF1Q9Y4B6 1507 aa33.43■■■□□ 2.94
SNHG11-201ENST00000359074 SCRIBQ14160 1630 aa33.06■■■□□ 2.88
SNHG11-201ENST00000359074 SHROOM4Q9ULL8 1493 aa32.95■■■□□ 2.87
SNHG11-201ENST00000359074 CC2D2AQ9P2K1 1620 aa32.63■■■□□ 2.81
SNHG11-201ENST00000359074 EIF4G1Q04637 1599 aaKnown RBP32.6■■■□□ 2.81
SNHG11-201ENST00000359074 CECR2Q9BXF3 1484 aa32.56■■■□□ 2.8
SNHG11-201ENST00000359074 NCAPD3P42695 1498 aa31.65■■■□□ 2.66
SNHG11-201ENST00000359074 ATAD2BQ9ULI0 1458 aa31.59■■■□□ 2.65
SNHG11-201ENST00000359074 SMARCA4P51532 1647 aa31.53■■■□□ 2.64
SNHG11-201ENST00000359074 SMARCA2P51531 1590 aa31.46■■■□□ 2.63
SNHG11-201ENST00000359074 BAZ1AQ9NRL2 1556 aaPredicted RBP31.41■■■□□ 2.62
SNHG11-201ENST00000359074 HMGXB3Q12766 1538 aa31.37■■■□□ 2.61
SNHG11-201ENST00000359074 BAZ1BQ9UIG0 1483 aaKnown RBP31.27■■■□□ 2.6
SNHG11-201ENST00000359074 MROH2BQ7Z745 1585 aa31.24■■■□□ 2.59
SNHG11-201ENST00000359074 ERCC6Q03468 1493 aa31.21■■■□□ 2.59
SNHG11-201ENST00000359074 PEG3Q9GZU2 1588 aa31.21■■■□□ 2.59
SNHG11-201ENST00000359074 NESP48681 1621 aa31.13■■■□□ 2.57
SNHG11-201ENST00000359074 CUX2O14529 1486 aa31.07■■■□□ 2.56
SNHG11-201ENST00000359074 DNAJC5Q9H3Z4 198 aa30.97■■■□□ 2.55
SNHG11-201ENST00000359074 LAMC3Q9Y6N6 1575 aa30.86■■■□□ 2.53
SNHG11-201ENST00000359074 WIZO95785 1651 aa30.83■■■□□ 2.53
SNHG11-201ENST00000359074 PDS5BQ9NTI5 1447 aa30.73■■■□□ 2.51
SNHG11-201ENST00000359074 CADPSQ9ULU8 1353 aa30.72■■■□□ 2.51
SNHG11-201ENST00000359074 THOC2Q8NI27 1593 aaKnown RBP30.68■■■□□ 2.5
SNHG11-201ENST00000359074 RSF1Q96T23 1441 aaPredicted RBP30.67■■■□□ 2.5
SNHG11-201ENST00000359074 KIF21AQ7Z4S6 1674 aa30.63■■■□□ 2.49
SNHG11-201ENST00000359074 TOP2AP11388 1531 aaKnown RBP30.45■■■□□ 2.47
SNHG11-201ENST00000359074 MRC2Q9UBG0 1479 aa30.44■■■□□ 2.46
SNHG11-201ENST00000359074 CFTRP13569 1480 aa30.38■■■□□ 2.45
SNHG11-201ENST00000359074 FANCD2Q9BXW9 1451 aa30.35■■■□□ 2.45
SNHG11-201ENST00000359074 CEP164Q9UPV0 1460 aa30.35■■■□□ 2.45
SNHG11-201ENST00000359074 WDR62O43379 1518 aa30.33■■■□□ 2.45
SNHG11-201ENST00000359074 CCDC88BA6NC98 1476 aa30.16■■■□□ 2.42
SNHG11-201ENST00000359074 URB2Q14146 1524 aaKnown RBP30.09■■■□□ 2.41
SNHG11-201ENST00000359074 PRDM2Q13029 1718 aa29.92■■■□□ 2.38
SNHG11-201ENST00000359074 TOPBP1Q92547 1522 aa29.78■■■□□ 2.36
SNHG11-201ENST00000359074 OSCARQ8IYS5 282 aa29.78■■■□□ 2.36
SNHG11-201ENST00000359074 IFT140Q96RY7 1462 aa29.74■■■□□ 2.35
SNHG11-201ENST00000359074 ZNF608Q9ULD9 1512 aaPredicted RBP29.71■■■□□ 2.35
SNHG11-201ENST00000359074 TRIM41Q8WV44 630 aa29.71■■■□□ 2.35
SNHG11-201ENST00000359074 ABCC8Q09428 1581 aa29.71■■■□□ 2.35
SNHG11-201ENST00000359074 DNMBPQ6XZF7 1577 aa29.65■■■□□ 2.34
SNHG11-201ENST00000359074 SUPT5HO00267 1087 aaKnown RBP29.52■■■□□ 2.32
SNHG11-201ENST00000359074 AQRO60306 1485 aaKnown RBP eCLIP29.49■■■□□ 2.311e-6■■■■■ 33.8
SNHG11-201ENST00000359074 POLA1P09884 1462 aaPredicted RBP29.49■■■□□ 2.31
SNHG11-201ENST00000359074 EIF4G3O43432 1585 aaKnown RBP29.47■■■□□ 2.31
SNHG11-201ENST00000359074 TARBP1Q13395 1621 aaKnown RBP29.47■■■□□ 2.31
SNHG11-201ENST00000359074 RAD54L2Q9Y4B4 1467 aa29.42■■■□□ 2.3
SNHG11-201ENST00000359074 SOGA1O94964 1423 aa29.41■■■□□ 2.3
SNHG11-201ENST00000359074 TDRD9Q8NDG6 1382 aaKnown RBP29.36■■■□□ 2.29
SNHG11-201ENST00000359074 FGD5Q6ZNL6 1462 aa29.34■■■□□ 2.29
SNHG11-201ENST00000359074 CUX1P39880 1505 aa29.32■■■□□ 2.28
SNHG11-201ENST00000359074 FBLN2P98095 1184 aa29.32■■■□□ 2.28
SNHG11-201ENST00000359074 RIMBP3CA6NJZ7 1639 aa29.26■■■□□ 2.27
SNHG11-201ENST00000359074 RIMBP3BA6NNM3 1639 aa29.26■■■□□ 2.27
SNHG11-201ENST00000359074 RIMBP3Q9UFD9 1639 aa29.26■■■□□ 2.27
SNHG11-201ENST00000359074 ARHGEF11O15085 1522 aa29.21■■■□□ 2.27
SNHG11-201ENST00000359074 CHD1O14646 1710 aa29.2■■■□□ 2.27
SNHG11-201ENST00000359074 SNAPC4Q5SXM2 1469 aa29.15■■■□□ 2.26
SNHG11-201ENST00000359074 WDR97A6NE52 1622 aa29.12■■■□□ 2.25
SNHG11-201ENST00000359074 CHMP7Q8WUX9 453 aaPredicted RBP29.11■■■□□ 2.25
SNHG11-201ENST00000359074 CYB5RLQ6IPT4 315 aa29.1■■■□□ 2.25
SNHG11-201ENST00000359074 GRIN2BQ13224 1484 aa29.1■■■□□ 2.25
SNHG11-201ENST00000359074 MAGI1Q96QZ7 1491 aaPredicted RBP29.05■■■□□ 2.24
SNHG11-201ENST00000359074 GAPVD1Q14C86 1478 aa29.02■■■□□ 2.24
SNHG11-201ENST00000359074 ABCA10Q8WWZ4 1543 aa28.99■■■□□ 2.23
SNHG11-201ENST00000359074 SYNJ2O15056 1496 aa28.97■■■□□ 2.23
SNHG11-201ENST00000359074 ARAP1Q96P48 1450 aa28.95■■■□□ 2.22
SNHG11-201ENST00000359074 WRNQ14191 1432 aaPredicted RBP eCLIP28.94■■■□□ 2.22
SNHG11-201ENST00000359074 CLASP1Q7Z460 1538 aa28.91■■■□□ 2.22
SNHG11-201ENST00000359074 SYNJ1O43426 1573 aa28.91■■■□□ 2.22
SNHG11-201ENST00000359074 ABCA5Q8WWZ7 1642 aa28.89■■■□□ 2.22
SNHG11-201ENST00000359074 PBRM1Q86U86 1689 aa28.89■■■□□ 2.21
SNHG11-201ENST00000359074 TOP2BQ02880 1626 aa28.86■■■□□ 2.21
SNHG11-201ENST00000359074 BIVM-ERCC5R4GMW8 1640 aa28.83■■■□□ 2.21
SNHG11-201ENST00000359074 TRHP20396 242 aaPredicted RBP28.72■■■□□ 2.19
SNHG11-201ENST00000359074 GRIN2AQ12879 1464 aa28.72■■■□□ 2.19
SNHG11-201ENST00000359074 ADAMTS12P58397 1594 aa28.67■■■□□ 2.18
SNHG11-201ENST00000359074 FHAD1B1AJZ9 1412 aa28.66■■■□□ 2.18
SNHG11-201ENST00000359074 NUP160Q12769 1436 aa28.61■■■□□ 2.17
SNHG11-201ENST00000359074 ERICH3Q5RHP9 1530 aa28.61■■■□□ 2.17
SNHG11-201ENST00000359074 CEP170Q5SW79 1584 aa28.58■■■□□ 2.17
SNHG11-201ENST00000359074 ERCC6L2Q5T890 1561 aa28.52■■■□□ 2.16
SNHG11-201ENST00000359074 SHROOM2Q13796 1616 aa28.4■■■□□ 2.14
SNHG11-201ENST00000359074 JPH4Q96JJ6 628 aa28.4■■■□□ 2.14
SNHG11-201ENST00000359074 IGF1RP08069 1367 aa28.37■■■□□ 2.13
SNHG11-201ENST00000359074 KIF27Q86VH2 1401 aa28.37■■■□□ 2.13
SNHG11-201ENST00000359074 PRG4Q92954 1404 aaPredicted RBP28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms