RNA–Protein interactions for RNA: ENST00000425424.3

SAPCD1-209, Transcript of suppressor APC domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SAPCD1, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-209ENST00000425424 NISCHQ9Y2I1 1504 aa39.19■■■■□ 3.86
SAPCD1-209ENST00000425424 CCDC180Q9P1Z9 1646 aa34.7■■■■□ 3.15
SAPCD1-209ENST00000425424 ABCC9O60706 1549 aa33.19■■■□□ 2.9
SAPCD1-209ENST00000425424 ZCCHC6Q5VYS8 1495 aaKnown RBP32.8■■■□□ 2.84
SAPCD1-209ENST00000425424 DCAF1Q9Y4B6 1507 aa32.57■■■□□ 2.8
SAPCD1-209ENST00000425424 MYO15BQ96JP2 1530 aa32.53■■■□□ 2.8
SAPCD1-209ENST00000425424 NACADO15069 1562 aa32.45■■■□□ 2.79
SAPCD1-209ENST00000425424 RB1CC1Q8TDY2 1594 aa32.32■■■□□ 2.77
SAPCD1-209ENST00000425424 DCAF8L2P0C7V8 631 aa32.21■■■□□ 2.75
SAPCD1-209ENST00000425424 UNC13AQ9UPW8 1703 aa31.56■■■□□ 2.64
SAPCD1-209ENST00000425424 SCRIBQ14160 1630 aa31.54■■■□□ 2.64
SAPCD1-209ENST00000425424 BICRAQ9NZM4 1560 aa31.3■■■□□ 2.6
SAPCD1-209ENST00000425424 SHROOM4Q9ULL8 1493 aa31.19■■■□□ 2.58
SAPCD1-209ENST00000425424 PABPN1Q86U42 306 aaKnown RBP eCLIP31.01■■■□□ 2.55
SAPCD1-209ENST00000425424 EIF4G1Q04637 1599 aaKnown RBP30.43■■■□□ 2.46
SAPCD1-209ENST00000425424 CECR2Q9BXF3 1484 aa30.38■■■□□ 2.45
SAPCD1-209ENST00000425424 BAZ1AQ9NRL2 1556 aaPredicted RBP30.37■■■□□ 2.45
SAPCD1-209ENST00000425424 SMARCA4P51532 1647 aa30.3■■■□□ 2.44
SAPCD1-209ENST00000425424 MROH2BQ7Z745 1585 aa30.15■■■□□ 2.42
SAPCD1-209ENST00000425424 CC2D2AQ9P2K1 1620 aa30.13■■■□□ 2.41
SAPCD1-209ENST00000425424 PEG3Q9GZU2 1588 aa30.08■■■□□ 2.41
SAPCD1-209ENST00000425424 RSF1Q96T23 1441 aaPredicted RBP30.03■■■□□ 2.4
SAPCD1-209ENST00000425424 SMARCA2P51531 1590 aa30.02■■■□□ 2.4
SAPCD1-209ENST00000425424 ATAD2BQ9ULI0 1458 aa29.97■■■□□ 2.39
SAPCD1-209ENST00000425424 NCAPD3P42695 1498 aa29.91■■■□□ 2.38
SAPCD1-209ENST00000425424 DNAJC5BQ9UF47 199 aa29.88■■■□□ 2.37
SAPCD1-209ENST00000425424 HMGXB3Q12766 1538 aa29.86■■■□□ 2.37
SAPCD1-209ENST00000425424 WIZO95785 1651 aa29.85■■■□□ 2.37
SAPCD1-209ENST00000425424 BAZ1BQ9UIG0 1483 aaKnown RBP29.74■■■□□ 2.35
SAPCD1-209ENST00000425424 TOP2AP11388 1531 aaKnown RBP29.66■■■□□ 2.34
SAPCD1-209ENST00000425424 SUPT5HO00267 1087 aaKnown RBP29.48■■■□□ 2.31
SAPCD1-209ENST00000425424 CCDC88BA6NC98 1476 aa29.23■■■□□ 2.27
SAPCD1-209ENST00000425424 LAMC3Q9Y6N6 1575 aa29.05■■■□□ 2.24
SAPCD1-209ENST00000425424 CADPSQ9ULU8 1353 aa29.01■■■□□ 2.24
SAPCD1-209ENST00000425424 CFTRP13569 1480 aa29■■■□□ 2.23
SAPCD1-209ENST00000425424 PRDM2Q13029 1718 aa28.89■■■□□ 2.22
SAPCD1-209ENST00000425424 NESP48681 1621 aa28.89■■■□□ 2.22
SAPCD1-209ENST00000425424 PDS5BQ9NTI5 1447 aa28.78■■■□□ 2.2
SAPCD1-209ENST00000425424 FANCD2Q9BXW9 1451 aa28.67■■■□□ 2.18
SAPCD1-209ENST00000425424 KIF21AQ7Z4S6 1674 aa28.64■■■□□ 2.17
SAPCD1-209ENST00000425424 CEP164Q9UPV0 1460 aa28.61■■■□□ 2.17
SAPCD1-209ENST00000425424 ERCC6Q03468 1493 aa28.59■■■□□ 2.17
SAPCD1-209ENST00000425424 THOC2Q8NI27 1593 aaKnown RBP28.47■■■□□ 2.15
SAPCD1-209ENST00000425424 MRC2Q9UBG0 1479 aa28.46■■■□□ 2.15
SAPCD1-209ENST00000425424 ABCC8Q09428 1581 aa28.4■■■□□ 2.14
SAPCD1-209ENST00000425424 WDR62O43379 1518 aa28.39■■■□□ 2.14
SAPCD1-209ENST00000425424 URB2Q14146 1524 aaKnown RBP28.35■■■□□ 2.13
SAPCD1-209ENST00000425424 DNMBPQ6XZF7 1577 aa28.35■■■□□ 2.13
SAPCD1-209ENST00000425424 WRNQ14191 1432 aaPredicted RBP eCLIP28.3■■■□□ 2.12
SAPCD1-209ENST00000425424 TOPBP1Q92547 1522 aa28.29■■■□□ 2.12
SAPCD1-209ENST00000425424 CUX1P39880 1505 aa28.28■■■□□ 2.12
SAPCD1-209ENST00000425424 BIVM-ERCC5R4GMW8 1640 aa28.25■■■□□ 2.11
SAPCD1-209ENST00000425424 TOP2BQ02880 1626 aa28.24■■■□□ 2.11
SAPCD1-209ENST00000425424 CUX2O14529 1486 aa28.21■■■□□ 2.11
SAPCD1-209ENST00000425424 SYNJ1O43426 1573 aa28.2■■■□□ 2.11
SAPCD1-209ENST00000425424 POLA1P09884 1462 aaPredicted RBP28.09■■■□□ 2.09
SAPCD1-209ENST00000425424 FGD5Q6ZNL6 1462 aa28.08■■■□□ 2.09
SAPCD1-209ENST00000425424 IFT140Q96RY7 1462 aa28.01■■■□□ 2.07
SAPCD1-209ENST00000425424 TARBP1Q13395 1621 aaKnown RBP27.98■■■□□ 2.07
SAPCD1-209ENST00000425424 SOGA1O94964 1423 aa27.93■■■□□ 2.06
SAPCD1-209ENST00000425424 WDR97A6NE52 1622 aa27.92■■■□□ 2.06
SAPCD1-209ENST00000425424 CHIC1Q5VXU3 224 aa27.92■■■□□ 2.06
SAPCD1-209ENST00000425424 TRIM41Q8WV44 630 aa27.9■■■□□ 2.06
SAPCD1-209ENST00000425424 ABCA10Q8WWZ4 1543 aa27.9■■■□□ 2.06
SAPCD1-209ENST00000425424 RAD54L2Q9Y4B4 1467 aa27.88■■■□□ 2.05
SAPCD1-209ENST00000425424 ABCA5Q8WWZ7 1642 aa27.76■■■□□ 2.03
SAPCD1-209ENST00000425424 EIF4G3O43432 1585 aaKnown RBP27.74■■■□□ 2.03
SAPCD1-209ENST00000425424 ZNF608Q9ULD9 1512 aaPredicted RBP27.74■■■□□ 2.03
SAPCD1-209ENST00000425424 KIF27Q86VH2 1401 aa27.67■■■□□ 2.02
SAPCD1-209ENST00000425424 GAPVD1Q14C86 1478 aa27.65■■■□□ 2.02
SAPCD1-209ENST00000425424 TDRD9Q8NDG6 1382 aaKnown RBP27.65■■■□□ 2.02
SAPCD1-209ENST00000425424 AQRO60306 1485 aaKnown RBP eCLIP27.64■■■□□ 2.01
SAPCD1-209ENST00000425424 PBRM1Q86U86 1689 aa27.61■■■□□ 2.01
SAPCD1-209ENST00000425424 GRIN2BQ13224 1484 aa27.6■■■□□ 2.01
SAPCD1-209ENST00000425424 ERICH3Q5RHP9 1530 aa27.6■■■□□ 2.01
SAPCD1-209ENST00000425424 EEA1Q15075 1411 aa27.58■■■□□ 2.01
SAPCD1-209ENST00000425424 MAGI1Q96QZ7 1491 aaPredicted RBP27.51■■■□□ 2
SAPCD1-209ENST00000425424 RUSC2Q8N2Y8 1516 aa27.49■■□□□ 1.99
SAPCD1-209ENST00000425424 CUL7Q14999 1698 aa27.46■■□□□ 1.99
SAPCD1-209ENST00000425424 IGF1RP08069 1367 aa27.46■■□□□ 1.99
SAPCD1-209ENST00000425424 SNAPC4Q5SXM2 1469 aa27.45■■□□□ 1.99
SAPCD1-209ENST00000425424 ADAMTS12P58397 1594 aa27.43■■□□□ 1.98
SAPCD1-209ENST00000425424 FHAD1B1AJZ9 1412 aa27.38■■□□□ 1.97
SAPCD1-209ENST00000425424 SYNJ2O15056 1496 aa27.37■■□□□ 1.97
SAPCD1-209ENST00000425424 PRXQ9BXM0 1461 aa27.32■■□□□ 1.96
SAPCD1-209ENST00000425424 CSRNP3Q8WYN3 585 aa27.31■■□□□ 1.96
SAPCD1-209ENST00000425424 CARMIL1Q5VZK9 1371 aa27.3■■□□□ 1.96
SAPCD1-209ENST00000425424 GRIN2AQ12879 1464 aa27.25■■□□□ 1.95
SAPCD1-209ENST00000425424 CHD1O14646 1710 aa27.25■■□□□ 1.95
SAPCD1-209ENST00000425424 KIF21BO75037 1637 aa27.25■■□□□ 1.95
SAPCD1-209ENST00000425424 RAPGEF2Q9Y4G8 1499 aa27.25■■□□□ 1.95
SAPCD1-209ENST00000425424 FAM9AQ8IZU1 332 aaPredicted RBP27.18■■□□□ 1.94
SAPCD1-209ENST00000425424 CHMP7Q8WUX9 453 aaPredicted RBP27.18■■□□□ 1.94
SAPCD1-209ENST00000425424 NUP160Q12769 1436 aa27.13■■□□□ 1.93
SAPCD1-209ENST00000425424 CEP170Q5SW79 1584 aa27.09■■□□□ 1.93
SAPCD1-209ENST00000425424 GOLGA3Q08378 1498 aa27.08■■□□□ 1.93
SAPCD1-209ENST00000425424 FBLN2P98095 1184 aa27.08■■□□□ 1.93
SAPCD1-209ENST00000425424 CLASP1Q7Z460 1538 aa27.03■■□□□ 1.92
SAPCD1-209ENST00000425424 OSCARQ8IYS5 282 aa27■■□□□ 1.91
SAPCD1-209ENST00000425424 CTTNBP2Q8WZ74 1663 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms