Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC31.2■■■□□ 2.59
GDF1P27539 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
GDF1P27539 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.43
GDF1P27539 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC30.25■■■□□ 2.43
GDF1P27539 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
GDF1P27539 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
GDF1P27539 AL356512.1-201ENST00000607453 1739 ntBASIC30.19■■■□□ 2.42
GDF1P27539 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC29.7■■■□□ 2.35
GDF1P27539 HES6-203ENST00000409160 1600 ntTSL 2 BASIC29.53■■■□□ 2.32
GDF1P27539 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC29.43■■■□□ 2.3
GDF1P27539 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC29.25■■■□□ 2.27
GDF1P27539 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC29.2■■■□□ 2.26
GDF1P27539 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC29.09■■■□□ 2.25
GDF1P27539 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC29.08■■■□□ 2.25
GDF1P27539 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC29.04■■■□□ 2.24
GDF1P27539 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC28.95■■■□□ 2.22
GDF1P27539 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC28.93■■■□□ 2.22
GDF1P27539 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
GDF1P27539 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
GDF1P27539 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC28.78■■■□□ 2.2
GDF1P27539 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
GDF1P27539 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
GDF1P27539 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
GDF1P27539 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
GDF1P27539 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
GDF1P27539 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
GDF1P27539 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
GDF1P27539 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
GDF1P27539 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
GDF1P27539 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
GDF1P27539 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC28.07■■■□□ 2.08
GDF1P27539 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
GDF1P27539 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
GDF1P27539 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC27.97■■■□□ 2.07
GDF1P27539 INO80B-203ENST00000409917 796 ntTSL 2 BASIC27.9■■■□□ 2.06
GDF1P27539 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC27.85■■■□□ 2.05
GDF1P27539 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
GDF1P27539 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC27.73■■■□□ 2.03
GDF1P27539 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC27.68■■■□□ 2.02
GDF1P27539 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
GDF1P27539 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
GDF1P27539 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
GDF1P27539 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
GDF1P27539 AC015813.7-201ENST00000623294 581 ntBASIC27.55■■■□□ 2
GDF1P27539 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC27.53■■■□□ 2
GDF1P27539 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
GDF1P27539 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC27.46■■□□□ 1.99
GDF1P27539 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
GDF1P27539 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC27.44■■□□□ 1.98
GDF1P27539 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
GDF1P27539 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC27.4■■□□□ 1.98
GDF1P27539 AC006077.2-201ENST00000623591 457 ntBASIC27.32■■□□□ 1.96
GDF1P27539 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
GDF1P27539 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC27.25■■□□□ 1.95
GDF1P27539 ZNRF2P1-201ENST00000441407 443 ntBASIC27.23■■□□□ 1.95
GDF1P27539 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
GDF1P27539 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
GDF1P27539 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
GDF1P27539 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
GDF1P27539 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC27.11■■□□□ 1.93
GDF1P27539 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
GDF1P27539 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
GDF1P27539 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
GDF1P27539 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
GDF1P27539 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
GDF1P27539 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
GDF1P27539 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
GDF1P27539 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
GDF1P27539 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
GDF1P27539 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
GDF1P27539 ILK-212ENST00000532063 1617 ntTSL 2 BASIC26.79■■□□□ 1.88
GDF1P27539 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
GDF1P27539 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC26.67■■□□□ 1.86
GDF1P27539 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
GDF1P27539 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
GDF1P27539 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
GDF1P27539 AP002365.1-201ENST00000603448 772 ntBASIC26.59■■□□□ 1.85
GDF1P27539 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC26.57■■□□□ 1.84
GDF1P27539 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
GDF1P27539 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
GDF1P27539 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
GDF1P27539 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
GDF1P27539 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.52■■□□□ 1.84
GDF1P27539 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC26.52■■□□□ 1.84
GDF1P27539 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
GDF1P27539 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
GDF1P27539 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
GDF1P27539 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
GDF1P27539 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC26.44■■□□□ 1.82
GDF1P27539 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC26.44■■□□□ 1.82
GDF1P27539 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC26.43■■□□□ 1.82
GDF1P27539 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
GDF1P27539 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
GDF1P27539 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
GDF1P27539 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.36■■□□□ 1.81
GDF1P27539 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
GDF1P27539 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
GDF1P27539 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
GDF1P27539 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.33■■□□□ 1.81
GDF1P27539 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms