Protein–RNA interactions for Protein: P08559

PDHA1, Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDHA1P08559 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDHA1P08559 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PDHA1P08559 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.08■□□□□ 0.32
PDHA1P08559 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.08■□□□□ 0.32
PDHA1P08559 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
PDHA1P08559 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDHA1P08559 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDHA1P08559 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDHA1P08559 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDHA1P08559 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PDHA1P08559 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDHA1P08559 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.07■□□□□ 0.32
PDHA1P08559 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDHA1P08559 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDHA1P08559 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDHA1P08559 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDHA1P08559 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDHA1P08559 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDHA1P08559 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDHA1P08559 KRT8P49-201ENST00000604166 1432 ntBASIC17.07■□□□□ 0.32
PDHA1P08559 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDHA1P08559 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDHA1P08559 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDHA1P08559 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDHA1P08559 AC129492.6-201ENST00000611383 1305 ntBASIC17.07■□□□□ 0.32
PDHA1P08559 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDHA1P08559 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDHA1P08559 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDHA1P08559 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDHA1P08559 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.07■□□□□ 0.32
PDHA1P08559 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PDHA1P08559 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.07■□□□□ 0.32
PDHA1P08559 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.07■□□□□ 0.32
PDHA1P08559 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.07■□□□□ 0.32
PDHA1P08559 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PDHA1P08559 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.07■□□□□ 0.32
PDHA1P08559 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.07■□□□□ 0.32
PDHA1P08559 AC140113.2-201ENST00000604370 208 ntBASIC17.07■□□□□ 0.32
PDHA1P08559 AC064836.3-201ENST00000607928 673 ntBASIC17.07■□□□□ 0.32
PDHA1P08559 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDHA1P08559 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
PDHA1P08559 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDHA1P08559 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDHA1P08559 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDHA1P08559 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDHA1P08559 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDHA1P08559 RNF216P1-203ENST00000404404 2427 ntBASIC17.07■□□□□ 0.32
PDHA1P08559 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDHA1P08559 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDHA1P08559 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDHA1P08559 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
PDHA1P08559 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDHA1P08559 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDHA1P08559 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDHA1P08559 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDHA1P08559 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PDHA1P08559 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDHA1P08559 AC105917.1-201ENST00000506637 2539 ntBASIC17.06■□□□□ 0.32
PDHA1P08559 TOP3BP1-201ENST00000420768 1380 ntBASIC17.06■□□□□ 0.32
PDHA1P08559 AL021920.2-201ENST00000624828 1351 ntBASIC17.06■□□□□ 0.32
PDHA1P08559 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDHA1P08559 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.06■□□□□ 0.32
PDHA1P08559 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDHA1P08559 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDHA1P08559 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDHA1P08559 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDHA1P08559 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDHA1P08559 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDHA1P08559 FAM185BP-201ENST00000443595 716 ntBASIC17.06■□□□□ 0.32
PDHA1P08559 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.06■□□□□ 0.32
PDHA1P08559 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.06■□□□□ 0.32
PDHA1P08559 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.06■□□□□ 0.32
PDHA1P08559 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.06■□□□□ 0.32
PDHA1P08559 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDHA1P08559 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.06■□□□□ 0.32
PDHA1P08559 ACTL9-202ENST00000612068 1252 ntBASIC17.06■□□□□ 0.32
PDHA1P08559 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDHA1P08559 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDHA1P08559 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.06■□□□□ 0.32
PDHA1P08559 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.06■□□□□ 0.32
PDHA1P08559 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDHA1P08559 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDHA1P08559 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDHA1P08559 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDHA1P08559 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.06■□□□□ 0.32
PDHA1P08559 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PDHA1P08559 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDHA1P08559 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDHA1P08559 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PDHA1P08559 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.05■□□□□ 0.32
PDHA1P08559 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.05■□□□□ 0.32
PDHA1P08559 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDHA1P08559 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDHA1P08559 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
PDHA1P08559 LINC02228-204ENST00000642115 2962 ntBASIC17.05■□□□□ 0.32
PDHA1P08559 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDHA1P08559 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.05■□□□□ 0.32
PDHA1P08559 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDHA1P08559 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.05■□□□□ 0.32
PDHA1P08559 AL645728.1-201ENST00000366221 2101 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms