RNA–Protein interactions for RNA: ENST00000447966.6

ASIC1-202, Transcript of acid sensing ion channel subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ASIC1, Length 3,778 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1-202ENST00000447966 NISCHQ9Y2I1 1504 aa29.24■■■□□ 2.27
ASIC1-202ENST00000447966 SHROOM4Q9ULL8 1493 aa27.53■■■□□ 2
ASIC1-202ENST00000447966 SUPT5HO00267 1087 aaKnown RBP27.45■■□□□ 1.99
ASIC1-202ENST00000447966 DCAF8L2P0C7V8 631 aa27.24■■□□□ 1.95
ASIC1-202ENST00000447966 PCGF6Q9BYE7 350 aa26.41■■□□□ 1.82
ASIC1-202ENST00000447966 EHMT2Q96KQ7 1210 aa26.23■■□□□ 1.79
ASIC1-202ENST00000447966 PPARGC1BQ86YN6 1023 aaKnown RBP26.02■■□□□ 1.76
ASIC1-202ENST00000447966 HRCP23327 699 aa25.82■■□□□ 1.72
ASIC1-202ENST00000447966 LOC105371045A0A1W2PR82 267 aa25.76■■□□□ 1.71
ASIC1-202ENST00000447966 CHIC1Q5VXU3 224 aa25.75■■□□□ 1.71
ASIC1-202ENST00000447966 FAM9AQ8IZU1 332 aaPredicted RBP25.72■■□□□ 1.71
ASIC1-202ENST00000447966 TTBK1Q5TCY1 1321 aaPredicted RBP25.36■■□□□ 1.65
ASIC1-202ENST00000447966 MYO15BQ96JP2 1530 aa25.26■■□□□ 1.63
ASIC1-202ENST00000447966 TRIM41Q8WV44 630 aa25.04■■□□□ 1.6
ASIC1-202ENST00000447966 TRIM26Q12899 539 aaPredicted RBP25■■□□□ 1.59
ASIC1-202ENST00000447966 CCER1Q8TC90 406 aaPredicted RBP24.71■■□□□ 1.55
ASIC1-202ENST00000447966 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.64■■□□□ 1.53
ASIC1-202ENST00000447966 ZCCHC6Q5VYS8 1495 aaKnown RBP24.56■■□□□ 1.52
ASIC1-202ENST00000447966 ZEB1P37275 1124 aaPredicted RBP24.56■■□□□ 1.52
ASIC1-202ENST00000447966 YTHDC1Q96MU7 727 aaKnown RBP24.53■■□□□ 1.52
ASIC1-202ENST00000447966 RANGAP1P46060 587 aaPredicted RBP24.51■■□□□ 1.51
ASIC1-202ENST00000447966 SCAF1Q9H7N4 1312 aaKnown RBP24.31■■□□□ 1.48
ASIC1-202ENST00000447966 DCAF1Q9Y4B6 1507 aa24.24■■□□□ 1.47
ASIC1-202ENST00000447966 UBTFP17480 764 aaKnown RBP24.19■■□□□ 1.46
ASIC1-202ENST00000447966 CENPBP07199 599 aaPredicted RBP24.14■■□□□ 1.46
ASIC1-202ENST00000447966 PELP1Q8IZL8 1130 aaKnown RBP24.14■■□□□ 1.45
ASIC1-202ENST00000447966 GTF3C3Q9Y5Q9 886 aa24.1■■□□□ 1.45
ASIC1-202ENST00000447966 DIEXFQ68CQ4 756 aaKnown RBP24.1■■□□□ 1.45
ASIC1-202ENST00000447966 HNRNPUL2Q1KMD3 747 aaKnown RBP24.05■■□□□ 1.44
ASIC1-202ENST00000447966 NEUROD1Q13562 356 aa24.02■■□□□ 1.44
ASIC1-202ENST00000447966 ACIN1Q9UKV3 1341 aaKnown RBP23.9■■□□□ 1.42
ASIC1-202ENST00000447966 APLP2Q06481 763 aa23.87■■□□□ 1.41
ASIC1-202ENST00000447966 SCRIBQ14160 1630 aa23.79■■□□□ 1.4
ASIC1-202ENST00000447966 ABCC9O60706 1549 aa23.72■■□□□ 1.39
ASIC1-202ENST00000447966 RSF1Q96T23 1441 aaPredicted RBP23.71■■□□□ 1.39
ASIC1-202ENST00000447966 ITGAEP38570 1179 aa23.65■■□□□ 1.38
ASIC1-202ENST00000447966 CCDC180Q9P1Z9 1646 aa23.65■■□□□ 1.38
ASIC1-202ENST00000447966 ZNF316A6NFI3 1004 aaPredicted RBP23.5■■□□□ 1.35
ASIC1-202ENST00000447966 PABPN1Q86U42 306 aaKnown RBP eCLIP23.5■■□□□ 1.35
ASIC1-202ENST00000447966 RB1CC1Q8TDY2 1594 aa23.45■■□□□ 1.34
ASIC1-202ENST00000447966 MIER1Q8N108 512 aa23.44■■□□□ 1.34
ASIC1-202ENST00000447966 ATP1B4Q9UN42 357 aaPredicted RBP23.42■■□□□ 1.34
ASIC1-202ENST00000447966 CECR2Q9BXF3 1484 aa23.4■■□□□ 1.34
ASIC1-202ENST00000447966 BCANQ96GW7 911 aa23.34■■□□□ 1.33
ASIC1-202ENST00000447966 CSRNP3Q8WYN3 585 aa23.33■■□□□ 1.33
ASIC1-202ENST00000447966 CEP162Q5TB80 1403 aa23.12■■□□□ 1.29
ASIC1-202ENST00000447966 SOGA1O94964 1423 aa23.09■■□□□ 1.29
ASIC1-202ENST00000447966 MROH2BQ7Z745 1585 aa23.07■■□□□ 1.28
ASIC1-202ENST00000447966 ABCC8Q09428 1581 aa23.02■■□□□ 1.28
ASIC1-202ENST00000447966 CNGB1Q14028 1251 aaPredicted RBP22.99■■□□□ 1.27
ASIC1-202ENST00000447966 CCDC88BA6NC98 1476 aa22.98■■□□□ 1.27
ASIC1-202ENST00000447966 HIRIP3Q9BW71 556 aaPredicted RBP22.96■■□□□ 1.27
ASIC1-202ENST00000447966 MYT1Q01538 1121 aa22.95■■□□□ 1.27
ASIC1-202ENST00000447966 WIZO95785 1651 aa22.88■■□□□ 1.25
ASIC1-202ENST00000447966 FAM50AQ14320 339 aaKnown RBP22.87■■□□□ 1.25
ASIC1-202ENST00000447966 RUSC2Q8N2Y8 1516 aa22.86■■□□□ 1.25
ASIC1-202ENST00000447966 NEFLP07196 543 aa22.85■■□□□ 1.25
ASIC1-202ENST00000447966 P3H3Q8IVL6 736 aa22.85■■□□□ 1.25
ASIC1-202ENST00000447966 DDX10Q13206 875 aaKnown RBP22.79■■□□□ 1.24
ASIC1-202ENST00000447966 CLIP1P30622 1438 aa22.76■■□□□ 1.23
ASIC1-202ENST00000447966 TNIKQ9UKE5 1360 aa22.75■■□□□ 1.23
ASIC1-202ENST00000447966 TRIM52Q96A61 297 aa22.74■■□□□ 1.23
ASIC1-202ENST00000447966 FKBP8Q14318 412 aa22.74■■□□□ 1.23
ASIC1-202ENST00000447966 KCNH8Q96L42 1107 aa22.7■■□□□ 1.22
ASIC1-202ENST00000447966 ERICH6Q7L0X2 663 aa22.67■■□□□ 1.22
ASIC1-202ENST00000447966 SUPT16HQ9Y5B9 1047 aaKnown RBP22.67■■□□□ 1.22
ASIC1-202ENST00000447966 KANK4Q5T7N3 995 aaPredicted RBP22.61■■□□□ 1.21
ASIC1-202ENST00000447966 GOLGA3Q08378 1498 aa22.6■■□□□ 1.21
ASIC1-202ENST00000447966 IRX6P78412 446 aaPredicted RBP22.6■■□□□ 1.21
ASIC1-202ENST00000447966 POLR3GLQ9BT43 218 aa22.6■■□□□ 1.21
ASIC1-202ENST00000447966 WRNQ14191 1432 aaPredicted RBP eCLIP22.57■■□□□ 1.2
ASIC1-202ENST00000447966 SIN3AQ96ST3 1273 aa22.54■■□□□ 1.2
ASIC1-202ENST00000447966 ARID3CA6NKF2 412 aa22.49■■□□□ 1.19
ASIC1-202ENST00000447966 SENP3-EIF4A1A0A087X0R7 540 aa22.48■■□□□ 1.19
ASIC1-202ENST00000447966 ANP32CO43423 234 aa22.43■■□□□ 1.18
ASIC1-202ENST00000447966 BAZ1AQ9NRL2 1556 aaPredicted RBP22.43■■□□□ 1.18
ASIC1-202ENST00000447966 TSHZ2Q9NRE2 1034 aa22.38■■□□□ 1.17
ASIC1-202ENST00000447966 NACADO15069 1562 aa22.37■■□□□ 1.17
ASIC1-202ENST00000447966 CEP164Q9UPV0 1460 aa22.34■■□□□ 1.17
ASIC1-202ENST00000447966 EEA1Q15075 1411 aa22.34■■□□□ 1.17
ASIC1-202ENST00000447966 RAPGEF2Q9Y4G8 1499 aa22.32■■□□□ 1.16
ASIC1-202ENST00000447966 HNRNPUQ00839 825 aaKnown RBP eCLIP22.32■■□□□ 1.16
ASIC1-202ENST00000447966 VPS8Q8N3P4 1428 aa22.31■■□□□ 1.16
ASIC1-202ENST00000447966 ANP32EQ9BTT0 268 aa22.24■■□□□ 1.15
ASIC1-202ENST00000447966 CHIC2Q9UKJ5 165 aa22.23■■□□□ 1.15
ASIC1-202ENST00000447966 DHX57Q6P158 1386 aaKnown RBP22.23■■□□□ 1.15
ASIC1-202ENST00000447966 ZNF326Q5BKZ1 582 aaKnown RBP22.21■■□□□ 1.15
ASIC1-202ENST00000447966 FAM9BQ8IZU0 186 aa22.2■■□□□ 1.14
ASIC1-202ENST00000447966 TOP2AP11388 1531 aaKnown RBP22.18■■□□□ 1.14
ASIC1-202ENST00000447966 CDK11AQ9UQ88 783 aaPredicted RBP22.13■■□□□ 1.13
ASIC1-202ENST00000447966 SMARCA2P51531 1590 aa22.12■■□□□ 1.13
ASIC1-202ENST00000447966 CCNB3Q8WWL7 1395 aa22.12■■□□□ 1.13
ASIC1-202ENST00000447966 TONSLQ96HA7 1378 aa22.11■■□□□ 1.13
ASIC1-202ENST00000447966 RBM19Q9Y4C8 960 aaKnown RBP22.09■■□□□ 1.13
ASIC1-202ENST00000447966 RAB3GAP2Q9H2M9 1393 aa22.08■■□□□ 1.13
ASIC1-202ENST00000447966 RRP7BPQ9NSQ0 103 aa22.06■■□□□ 1.12
ASIC1-202ENST00000447966 BAZ1BQ9UIG0 1483 aaKnown RBP22.05■■□□□ 1.12
ASIC1-202ENST00000447966 CLSPNQ9HAW4 1339 aa22.05■■□□□ 1.12
ASIC1-202ENST00000447966 SMARCA4P51532 1647 aa22.03■■□□□ 1.12
ASIC1-202ENST00000447966 NBR1Q14596 966 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 166.3 ms