RNA–Protein interactions for RNA: ENST00000338372.6

VSTM1-201, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSTM1, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-201ENST00000338372 NISCHQ9Y2I1 1504 aa42.89■■■■■ 4.46
VSTM1-201ENST00000338372 CCDC180Q9P1Z9 1646 aa38.4■■■■□ 3.74
VSTM1-201ENST00000338372 ABCC9O60706 1549 aa38.13■■■■□ 3.69
VSTM1-201ENST00000338372 RB1CC1Q8TDY2 1594 aa36.39■■■■□ 3.42
VSTM1-201ENST00000338372 NACADO15069 1562 aa36.23■■■■□ 3.39
VSTM1-201ENST00000338372 DCAF8L2P0C7V8 631 aa35.88■■■■□ 3.33
VSTM1-201ENST00000338372 MYO15BQ96JP2 1530 aa35.86■■■■□ 3.33
VSTM1-201ENST00000338372 DNAJC5BQ9UF47 199 aa35.76■■■■□ 3.32
VSTM1-201ENST00000338372 UNC13AQ9UPW8 1703 aa35.74■■■■□ 3.31
VSTM1-201ENST00000338372 ZCCHC6Q5VYS8 1495 aaKnown RBP35.59■■■■□ 3.29
VSTM1-201ENST00000338372 PABPN1Q86U42 306 aaKnown RBP eCLIP35.52■■■■□ 3.28
VSTM1-201ENST00000338372 BICRAQ9NZM4 1560 aa35.48■■■■□ 3.27
VSTM1-201ENST00000338372 DCAF1Q9Y4B6 1507 aa35.47■■■■□ 3.27
VSTM1-201ENST00000338372 SCRIBQ14160 1630 aa34.92■■■■□ 3.18
VSTM1-201ENST00000338372 SHROOM4Q9ULL8 1493 aa34.9■■■■□ 3.18
VSTM1-201ENST00000338372 CC2D2AQ9P2K1 1620 aa34.52■■■■□ 3.12
VSTM1-201ENST00000338372 EIF4G1Q04637 1599 aaKnown RBP34.49■■■■□ 3.11
VSTM1-201ENST00000338372 CECR2Q9BXF3 1484 aa34.33■■■■□ 3.09
VSTM1-201ENST00000338372 NCAPD3P42695 1498 aa33.49■■■□□ 2.95
VSTM1-201ENST00000338372 SMARCA4P51532 1647 aa33.41■■■□□ 2.94
VSTM1-201ENST00000338372 ATAD2BQ9ULI0 1458 aa33.39■■■□□ 2.94
VSTM1-201ENST00000338372 SMARCA2P51531 1590 aa33.25■■■□□ 2.91
VSTM1-201ENST00000338372 HMGXB3Q12766 1538 aa33.23■■■□□ 2.91
VSTM1-201ENST00000338372 BAZ1AQ9NRL2 1556 aaPredicted RBP33.21■■■□□ 2.91
VSTM1-201ENST00000338372 PEG3Q9GZU2 1588 aa33.14■■■□□ 2.9
VSTM1-201ENST00000338372 MROH2BQ7Z745 1585 aa33.07■■■□□ 2.88
VSTM1-201ENST00000338372 BAZ1BQ9UIG0 1483 aaKnown RBP32.99■■■□□ 2.87
VSTM1-201ENST00000338372 NESP48681 1621 aa32.88■■■□□ 2.85
VSTM1-201ENST00000338372 CUX2O14529 1486 aa32.8■■■□□ 2.84
VSTM1-201ENST00000338372 ERCC6Q03468 1493 aa32.8■■■□□ 2.84
VSTM1-201ENST00000338372 WIZO95785 1651 aa32.67■■■□□ 2.82
VSTM1-201ENST00000338372 LAMC3Q9Y6N6 1575 aa32.65■■■□□ 2.82
VSTM1-201ENST00000338372 DNAJC5Q9H3Z4 198 aa32.61■■■□□ 2.81
VSTM1-201ENST00000338372 THOC2Q8NI27 1593 aaKnown RBP32.53■■■□□ 2.8
VSTM1-201ENST00000338372 KIF21AQ7Z4S6 1674 aa32.48■■■□□ 2.79
VSTM1-201ENST00000338372 RSF1Q96T23 1441 aaPredicted RBP32.44■■■□□ 2.78
VSTM1-201ENST00000338372 CADPSQ9ULU8 1353 aa32.43■■■□□ 2.78
VSTM1-201ENST00000338372 PDS5BQ9NTI5 1447 aa32.38■■■□□ 2.77
VSTM1-201ENST00000338372 TOP2AP11388 1531 aaKnown RBP32.22■■■□□ 2.75
VSTM1-201ENST00000338372 CFTRP13569 1480 aa32.14■■■□□ 2.74
VSTM1-201ENST00000338372 MRC2Q9UBG0 1479 aa32.13■■■□□ 2.73
VSTM1-201ENST00000338372 WDR62O43379 1518 aa32.1■■■□□ 2.73
VSTM1-201ENST00000338372 FANCD2Q9BXW9 1451 aa32.03■■■□□ 2.72
VSTM1-201ENST00000338372 CEP164Q9UPV0 1460 aa32.01■■■□□ 2.71
VSTM1-201ENST00000338372 CCDC88BA6NC98 1476 aa31.89■■■□□ 2.7
VSTM1-201ENST00000338372 PRDM2Q13029 1718 aa31.85■■■□□ 2.69
VSTM1-201ENST00000338372 URB2Q14146 1524 aaKnown RBP31.83■■■□□ 2.69
VSTM1-201ENST00000338372 TOPBP1Q92547 1522 aa31.49■■■□□ 2.63
VSTM1-201ENST00000338372 ZNF608Q9ULD9 1512 aaPredicted RBP31.39■■■□□ 2.62
VSTM1-201ENST00000338372 IFT140Q96RY7 1462 aa31.39■■■□□ 2.62
VSTM1-201ENST00000338372 ABCC8Q09428 1581 aa31.37■■■□□ 2.61
VSTM1-201ENST00000338372 DNMBPQ6XZF7 1577 aa31.37■■■□□ 2.61
VSTM1-201ENST00000338372 OSCARQ8IYS5 282 aa31.29■■■□□ 2.6
VSTM1-201ENST00000338372 TARBP1Q13395 1621 aaKnown RBP31.26■■■□□ 2.59
VSTM1-201ENST00000338372 EIF4G3O43432 1585 aaKnown RBP31.19■■■□□ 2.58
VSTM1-201ENST00000338372 POLA1P09884 1462 aaPredicted RBP31.18■■■□□ 2.58
VSTM1-201ENST00000338372 AQRO60306 1485 aaKnown RBP eCLIP31.1■■■□□ 2.57
VSTM1-201ENST00000338372 TRIM41Q8WV44 630 aa31.09■■■□□ 2.57
VSTM1-201ENST00000338372 RAD54L2Q9Y4B4 1467 aa31.06■■■□□ 2.56
VSTM1-201ENST00000338372 CUX1P39880 1505 aa31.04■■■□□ 2.56
VSTM1-201ENST00000338372 SOGA1O94964 1423 aa30.98■■■□□ 2.55
VSTM1-201ENST00000338372 FGD5Q6ZNL6 1462 aa30.98■■■□□ 2.55
VSTM1-201ENST00000338372 SUPT5HO00267 1087 aaKnown RBP30.97■■■□□ 2.55
VSTM1-201ENST00000338372 CHD1O14646 1710 aa30.95■■■□□ 2.55
VSTM1-201ENST00000338372 RIMBP3CA6NJZ7 1639 aa30.95■■■□□ 2.54
VSTM1-201ENST00000338372 RIMBP3BA6NNM3 1639 aa30.95■■■□□ 2.54
VSTM1-201ENST00000338372 RIMBP3Q9UFD9 1639 aa30.95■■■□□ 2.54
VSTM1-201ENST00000338372 TDRD9Q8NDG6 1382 aaKnown RBP30.92■■■□□ 2.54
VSTM1-201ENST00000338372 WDR97A6NE52 1622 aa30.87■■■□□ 2.53
VSTM1-201ENST00000338372 ARHGEF11O15085 1522 aa30.84■■■□□ 2.53
VSTM1-201ENST00000338372 SNAPC4Q5SXM2 1469 aa30.75■■■□□ 2.51
VSTM1-201ENST00000338372 GRIN2BQ13224 1484 aa30.7■■■□□ 2.5
VSTM1-201ENST00000338372 FBLN2P98095 1184 aa30.69■■■□□ 2.5
VSTM1-201ENST00000338372 MAGI1Q96QZ7 1491 aaPredicted RBP30.69■■■□□ 2.5
VSTM1-201ENST00000338372 ABCA10Q8WWZ4 1543 aa30.68■■■□□ 2.5
VSTM1-201ENST00000338372 ABCA5Q8WWZ7 1642 aa30.64■■■□□ 2.5
VSTM1-201ENST00000338372 PBRM1Q86U86 1689 aa30.64■■■□□ 2.5
VSTM1-201ENST00000338372 GAPVD1Q14C86 1478 aa30.63■■■□□ 2.49
VSTM1-201ENST00000338372 CLASP1Q7Z460 1538 aa30.63■■■□□ 2.49
VSTM1-201ENST00000338372 BIVM-ERCC5R4GMW8 1640 aa30.61■■■□□ 2.49
VSTM1-201ENST00000338372 SYNJ2O15056 1496 aa30.58■■■□□ 2.49
VSTM1-201ENST00000338372 ARAP1Q96P48 1450 aa30.58■■■□□ 2.49
VSTM1-201ENST00000338372 TOP2BQ02880 1626 aa30.58■■■□□ 2.49
VSTM1-201ENST00000338372 SYNJ1O43426 1573 aa30.56■■■□□ 2.48
VSTM1-201ENST00000338372 CHMP7Q8WUX9 453 aaPredicted RBP30.54■■■□□ 2.48
VSTM1-201ENST00000338372 CYB5RLQ6IPT4 315 aa30.53■■■□□ 2.48
VSTM1-201ENST00000338372 WRNQ14191 1432 aaPredicted RBP eCLIP30.51■■■□□ 2.47
VSTM1-201ENST00000338372 ADAMTS12P58397 1594 aa30.35■■■□□ 2.45
VSTM1-201ENST00000338372 GRIN2AQ12879 1464 aa30.32■■■□□ 2.44
VSTM1-201ENST00000338372 ERICH3Q5RHP9 1530 aa30.27■■■□□ 2.44
VSTM1-201ENST00000338372 NUP160Q12769 1436 aa30.27■■■□□ 2.44
VSTM1-201ENST00000338372 CEP170Q5SW79 1584 aa30.25■■■□□ 2.43
VSTM1-201ENST00000338372 FHAD1B1AJZ9 1412 aa30.23■■■□□ 2.43
VSTM1-201ENST00000338372 ERCC6L2Q5T890 1561 aa30.19■■■□□ 2.42
VSTM1-201ENST00000338372 SHROOM2Q13796 1616 aa30.14■■■□□ 2.42
VSTM1-201ENST00000338372 TRHP20396 242 aaPredicted RBP30.02■■■□□ 2.4
VSTM1-201ENST00000338372 IGF1RP08069 1367 aa29.97■■■□□ 2.39
VSTM1-201ENST00000338372 RUSC2Q8N2Y8 1516 aa29.92■■■□□ 2.38
VSTM1-201ENST00000338372 JPH4Q96JJ6 628 aa29.89■■■□□ 2.38
VSTM1-201ENST00000338372 KIF27Q86VH2 1401 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms