RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 NISCHQ9Y2I1 1504 aa34.27■■■■□ 3.08
CDK11B-204ENST00000407249 CCDC180Q9P1Z9 1646 aa29.73■■■□□ 2.35
CDK11B-204ENST00000407249 ZCCHC6Q5VYS8 1495 aaKnown RBP28.91■■■□□ 2.22
CDK11B-204ENST00000407249 DCAF1Q9Y4B6 1507 aa28.42■■■□□ 2.14
CDK11B-204ENST00000407249 PELP1Q8IZL8 1130 aaKnown RBP28.2■■■□□ 2.11
CDK11B-204ENST00000407249 SHROOM4Q9ULL8 1493 aa28.16■■■□□ 2.1
CDK11B-204ENST00000407249 DCAF8L2P0C7V8 631 aa27.97■■■□□ 2.07
CDK11B-204ENST00000407249 MYO15BQ96JP2 1530 aa27.91■■■□□ 2.06
CDK11B-204ENST00000407249 MYT1Q01538 1121 aa27.8■■■□□ 2.04
CDK11B-204ENST00000407249 NACADO15069 1562 aa27.54■■■□□ 2
CDK11B-204ENST00000407249 SUPT5HO00267 1087 aaKnown RBP27.54■■■□□ 2
CDK11B-204ENST00000407249 ABCC9O60706 1549 aa27.49■■□□□ 1.99
CDK11B-204ENST00000407249 SCRIBQ14160 1630 aa27.3■■□□□ 1.96
CDK11B-204ENST00000407249 RB1CC1Q8TDY2 1594 aa27.17■■□□□ 1.94
CDK11B-204ENST00000407249 CHIC1Q5VXU3 224 aa27.03■■□□□ 1.92
CDK11B-204ENST00000407249 HRCP23327 699 aa26.99■■□□□ 1.91
CDK11B-204ENST00000407249 TTBK1Q5TCY1 1321 aaPredicted RBP26.79■■□□□ 1.88
CDK11B-204ENST00000407249 RSF1Q96T23 1441 aaPredicted RBP26.75■■□□□ 1.87
CDK11B-204ENST00000407249 PCGF6Q9BYE7 350 aa26.64■■□□□ 1.86
CDK11B-204ENST00000407249 UNC13AQ9UPW8 1703 aa26.59■■□□□ 1.85
CDK11B-204ENST00000407249 CECR2Q9BXF3 1484 aa26.51■■□□□ 1.83
CDK11B-204ENST00000407249 BAZ1AQ9NRL2 1556 aaPredicted RBP26.46■■□□□ 1.83
CDK11B-204ENST00000407249 MROH2BQ7Z745 1585 aa26.45■■□□□ 1.83
CDK11B-204ENST00000407249 PPARGC1BQ86YN6 1023 aaKnown RBP26.32■■□□□ 1.8
CDK11B-204ENST00000407249 BICRAQ9NZM4 1560 aa26.29■■□□□ 1.8
CDK11B-204ENST00000407249 WIZO95785 1651 aa26.26■■□□□ 1.79
CDK11B-204ENST00000407249 SMARCA4P51532 1647 aa26.25■■□□□ 1.79
CDK11B-204ENST00000407249 LOC105371045A0A1W2PR82 267 aa26.24■■□□□ 1.79
CDK11B-204ENST00000407249 TOP2AP11388 1531 aaKnown RBP26.08■■□□□ 1.77
CDK11B-204ENST00000407249 PRKCSHP14314 528 aaPredicted RBP26.06■■□□□ 1.76
CDK11B-204ENST00000407249 TRIM26Q12899 539 aaPredicted RBP26.04■■□□□ 1.76
CDK11B-204ENST00000407249 PABPN1Q86U42 306 aaKnown RBP eCLIP25.97■■□□□ 1.75
CDK11B-204ENST00000407249 PEG3Q9GZU2 1588 aa25.95■■□□□ 1.74
CDK11B-204ENST00000407249 EIF4G1Q04637 1599 aaKnown RBP25.85■■□□□ 1.73
CDK11B-204ENST00000407249 SMARCA2P51531 1590 aa25.82■■□□□ 1.72
CDK11B-204ENST00000407249 TRIM41Q8WV44 630 aa25.76■■□□□ 1.71
CDK11B-204ENST00000407249 CCDC88BA6NC98 1476 aa25.76■■□□□ 1.71
CDK11B-204ENST00000407249 ZEB1P37275 1124 aaPredicted RBP25.68■■□□□ 1.7
CDK11B-204ENST00000407249 ATAD2BQ9ULI0 1458 aa25.66■■□□□ 1.7
CDK11B-204ENST00000407249 ERICH6Q7L0X2 663 aa25.59■■□□□ 1.69
CDK11B-204ENST00000407249 SCAF1Q9H7N4 1312 aaKnown RBP25.57■■□□□ 1.68
CDK11B-204ENST00000407249 BAZ1BQ9UIG0 1483 aaKnown RBP25.57■■□□□ 1.68
CDK11B-204ENST00000407249 APLP2Q06481 763 aa25.53■■□□□ 1.68
CDK11B-204ENST00000407249 HMGXB3Q12766 1538 aa25.43■■□□□ 1.66
CDK11B-204ENST00000407249 BCL11AQ9H165 835 aa25.43■■□□□ 1.66
CDK11B-204ENST00000407249 FAM9AQ8IZU1 332 aaPredicted RBP25.42■■□□□ 1.66
CDK11B-204ENST00000407249 NCAPD3P42695 1498 aa25.38■■□□□ 1.65
CDK11B-204ENST00000407249 ABCC8Q09428 1581 aa25.35■■□□□ 1.65
CDK11B-204ENST00000407249 SLC24A1O60721 1099 aa25.33■■□□□ 1.65
CDK11B-204ENST00000407249 EEA1Q15075 1411 aa25.19■■□□□ 1.62
CDK11B-204ENST00000407249 WRNQ14191 1432 aaPredicted RBP eCLIP25.19■■□□□ 1.62
CDK11B-204ENST00000407249 EHMT2Q96KQ7 1210 aa25.18■■□□□ 1.62
CDK11B-204ENST00000407249 SYNJ1O43426 1573 aa25.05■■□□□ 1.6
CDK11B-204ENST00000407249 SOGA1O94964 1423 aa24.97■■□□□ 1.59
CDK11B-204ENST00000407249 TOP2BQ02880 1626 aa24.96■■□□□ 1.59
CDK11B-204ENST00000407249 CFTRP13569 1480 aa24.96■■□□□ 1.59
CDK11B-204ENST00000407249 CC2D2AQ9P2K1 1620 aa24.94■■□□□ 1.58
CDK11B-204ENST00000407249 BIVM-ERCC5R4GMW8 1640 aa24.94■■□□□ 1.58
CDK11B-204ENST00000407249 PRDM2Q13029 1718 aa24.92■■□□□ 1.58
CDK11B-204ENST00000407249 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.9■■□□□ 1.58
CDK11B-204ENST00000407249 CSRNP3Q8WYN3 585 aa24.88■■□□□ 1.57
CDK11B-204ENST00000407249 CCER1Q8TC90 406 aaPredicted RBP24.86■■□□□ 1.57
CDK11B-204ENST00000407249 RUSC2Q8N2Y8 1516 aa24.82■■□□□ 1.56
CDK11B-204ENST00000407249 TNIKQ9UKE5 1360 aa24.82■■□□□ 1.56
CDK11B-204ENST00000407249 GOLGA3Q08378 1498 aa24.82■■□□□ 1.56
CDK11B-204ENST00000407249 KIF21BO75037 1637 aa24.81■■□□□ 1.56
CDK11B-204ENST00000407249 CEP164Q9UPV0 1460 aa24.77■■□□□ 1.56
CDK11B-204ENST00000407249 ACIN1Q9UKV3 1341 aaKnown RBP24.76■■□□□ 1.55
CDK11B-204ENST00000407249 CADPSQ9ULU8 1353 aa24.74■■□□□ 1.55
CDK11B-204ENST00000407249 CUX1P39880 1505 aa24.72■■□□□ 1.55
CDK11B-204ENST00000407249 CEP162Q5TB80 1403 aa24.69■■□□□ 1.54
CDK11B-204ENST00000407249 CENPBP07199 599 aaPredicted RBP24.69■■□□□ 1.54
CDK11B-204ENST00000407249 NEUROD1Q13562 356 aa24.68■■□□□ 1.54
CDK11B-204ENST00000407249 DIEXFQ68CQ4 756 aaKnown RBP24.64■■□□□ 1.54
CDK11B-204ENST00000407249 UBTFP17480 764 aaKnown RBP24.57■■□□□ 1.52
CDK11B-204ENST00000407249 ERICH3Q5RHP9 1530 aa24.56■■□□□ 1.52
CDK11B-204ENST00000407249 KIF27Q86VH2 1401 aa24.53■■□□□ 1.52
CDK11B-204ENST00000407249 PRXQ9BXM0 1461 aa24.48■■□□□ 1.51
CDK11B-204ENST00000407249 GTF3C3Q9Y5Q9 886 aa24.48■■□□□ 1.51
CDK11B-204ENST00000407249 FANCD2Q9BXW9 1451 aa24.47■■□□□ 1.51
CDK11B-204ENST00000407249 RAPGEF2Q9Y4G8 1499 aa24.47■■□□□ 1.51
CDK11B-204ENST00000407249 LAMC3Q9Y6N6 1575 aa24.46■■□□□ 1.51
CDK11B-204ENST00000407249 CLIP1P30622 1438 aa24.39■■□□□ 1.5
CDK11B-204ENST00000407249 DNMBPQ6XZF7 1577 aa24.39■■□□□ 1.5
CDK11B-204ENST00000407249 FGD5Q6ZNL6 1462 aa24.37■■□□□ 1.49
CDK11B-204ENST00000407249 DAXXQ9UER7 740 aaPredicted RBP24.37■■□□□ 1.49
CDK11B-204ENST00000407249 ZNF316A6NFI3 1004 aaPredicted RBP24.34■■□□□ 1.49
CDK11B-204ENST00000407249 CUX2O14529 1486 aa24.31■■□□□ 1.48
CDK11B-204ENST00000407249 NESP48681 1621 aa24.29■■□□□ 1.48
CDK11B-204ENST00000407249 VPS8Q8N3P4 1428 aa24.28■■□□□ 1.48
CDK11B-204ENST00000407249 TOPBP1Q92547 1522 aa24.27■■□□□ 1.48
CDK11B-204ENST00000407249 PDS5BQ9NTI5 1447 aa24.24■■□□□ 1.47
CDK11B-204ENST00000407249 ABCA10Q8WWZ4 1543 aa24.21■■□□□ 1.47
CDK11B-204ENST00000407249 IGF1RP08069 1367 aa24.2■■□□□ 1.46
CDK11B-204ENST00000407249 POLA1P09884 1462 aaPredicted RBP24.18■■□□□ 1.46
CDK11B-204ENST00000407249 ANP32EQ9BTT0 268 aa24.17■■□□□ 1.46
CDK11B-204ENST00000407249 DNAJC5BQ9UF47 199 aa24.14■■□□□ 1.46
CDK11B-204ENST00000407249 URB2Q14146 1524 aaKnown RBP24.12■■□□□ 1.45
CDK11B-204ENST00000407249 CARMIL1Q5VZK9 1371 aa24.11■■□□□ 1.45
CDK11B-204ENST00000407249 WDR97A6NE52 1622 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms