Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 AC126365.1-201ENST00000578585 1514 ntBASIC11.65□□□□□ -0.54
LINC01546A6NGU7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 FGD5P1-202ENST00000614866 2498 ntBASIC11.65□□□□□ -0.54
LINC01546A6NGU7 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 CCS-201ENST00000310190 942 ntTSL 5 BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 RNF126P1-202ENST00000569893 925 ntBASIC11.65□□□□□ -0.54
LINC01546A6NGU7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01546A6NGU7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
LINC01546A6NGU7 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
LINC01546A6NGU7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC11.65□□□□□ -0.55
LINC01546A6NGU7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
LINC01546A6NGU7 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
LINC01546A6NGU7 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC11.65□□□□□ -0.55
LINC01546A6NGU7 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.55
LINC01546A6NGU7 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
LINC01546A6NGU7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
LINC01546A6NGU7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.55
LINC01546A6NGU7 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 ARHGAP23P1-201ENST00000562773 1937 ntBASIC11.64□□□□□ -0.55
LINC01546A6NGU7 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 AC091951.1-201ENST00000512854 2465 ntBASIC11.64□□□□□ -0.55
LINC01546A6NGU7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 AC131009.4-201ENST00000624048 1740 ntBASIC11.64□□□□□ -0.55
LINC01546A6NGU7 AC005622.1-201ENST00000636801 1703 ntBASIC11.64□□□□□ -0.55
LINC01546A6NGU7 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms