RNA–Protein interactions for RNA: ENST00000499809.1

LINC00900-201, long intergenic non-protein coding RNA 900, humanhuman

TSL 2 BASIC

Gene LINC00900, Length 3,322 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00900-201ENST00000499809 NISCHQ9Y2I1 1504 aa33.31■■■□□ 2.92
LINC00900-201ENST00000499809 CCDC180Q9P1Z9 1646 aa28.42■■■□□ 2.14
LINC00900-201ENST00000499809 SHROOM4Q9ULL8 1493 aa28.22■■■□□ 2.11
LINC00900-201ENST00000499809 ZCCHC6Q5VYS8 1495 aaKnown RBP28.07■■■□□ 2.08
LINC00900-201ENST00000499809 DCAF8L2P0C7V8 631 aa27.92■■■□□ 2.06
LINC00900-201ENST00000499809 SUPT5HO00267 1087 aaKnown RBP27.5■■□□□ 1.99
LINC00900-201ENST00000499809 DCAF1Q9Y4B6 1507 aa27.28■■□□□ 1.96
LINC00900-201ENST00000499809 ABCC9O60706 1549 aa26.83■■□□□ 1.89
LINC00900-201ENST00000499809 SCRIBQ14160 1630 aa26.67■■□□□ 1.86
LINC00900-201ENST00000499809 MYO15BQ96JP2 1530 aa26.64■■□□□ 1.85
LINC00900-201ENST00000499809 CHIC1Q5VXU3 224 aa26.49■■□□□ 1.83
LINC00900-201ENST00000499809 NACADO15069 1562 aa26.43■■□□□ 1.82
LINC00900-201ENST00000499809 RSF1Q96T23 1441 aaPredicted RBP26.24■■□□□ 1.79
LINC00900-201ENST00000499809 RB1CC1Q8TDY2 1594 aa26.1■■□□□ 1.77
LINC00900-201ENST00000499809 CECR2Q9BXF3 1484 aa26.06■■□□□ 1.76
LINC00900-201ENST00000499809 MROH2BQ7Z745 1585 aa25.9■■□□□ 1.74
LINC00900-201ENST00000499809 LOC105371045A0A1W2PR82 267 aa25.74■■□□□ 1.71
LINC00900-201ENST00000499809 WIZO95785 1651 aa25.72■■□□□ 1.71
LINC00900-201ENST00000499809 PABPN1Q86U42 306 aaKnown RBP eCLIP25.64■■□□□ 1.7
LINC00900-201ENST00000499809 TRIM41Q8WV44 630 aa25.63■■□□□ 1.69
LINC00900-201ENST00000499809 UNC13AQ9UPW8 1703 aa25.63■■□□□ 1.69
LINC00900-201ENST00000499809 BAZ1AQ9NRL2 1556 aaPredicted RBP25.6■■□□□ 1.69
LINC00900-201ENST00000499809 FAM9AQ8IZU1 332 aaPredicted RBP25.45■■□□□ 1.66
LINC00900-201ENST00000499809 SMARCA4P51532 1647 aa25.43■■□□□ 1.66
LINC00900-201ENST00000499809 BICRAQ9NZM4 1560 aa25.4■■□□□ 1.66
LINC00900-201ENST00000499809 TOP2AP11388 1531 aaKnown RBP25.29■■□□□ 1.64
LINC00900-201ENST00000499809 PCGF6Q9BYE7 350 aa25.29■■□□□ 1.64
LINC00900-201ENST00000499809 EHMT2Q96KQ7 1210 aa25.28■■□□□ 1.64
LINC00900-201ENST00000499809 CCDC88BA6NC98 1476 aa25.23■■□□□ 1.63
LINC00900-201ENST00000499809 SMARCA2P51531 1590 aa25.14■■□□□ 1.62
LINC00900-201ENST00000499809 EIF4G1Q04637 1599 aaKnown RBP25.11■■□□□ 1.61
LINC00900-201ENST00000499809 ABCC8Q09428 1581 aa25.02■■□□□ 1.6
LINC00900-201ENST00000499809 HRCP23327 699 aa24.93■■□□□ 1.58
LINC00900-201ENST00000499809 PEG3Q9GZU2 1588 aa24.93■■□□□ 1.58
LINC00900-201ENST00000499809 ATAD2BQ9ULI0 1458 aa24.92■■□□□ 1.58
LINC00900-201ENST00000499809 TRIM26Q12899 539 aaPredicted RBP24.86■■□□□ 1.57
LINC00900-201ENST00000499809 BAZ1BQ9UIG0 1483 aaKnown RBP24.84■■□□□ 1.57
LINC00900-201ENST00000499809 SOGA1O94964 1423 aa24.74■■□□□ 1.55
LINC00900-201ENST00000499809 WRNQ14191 1432 aaPredicted RBP eCLIP24.66■■□□□ 1.54
LINC00900-201ENST00000499809 PPARGC1BQ86YN6 1023 aaKnown RBP24.64■■□□□ 1.54
LINC00900-201ENST00000499809 RUSC2Q8N2Y8 1516 aa24.63■■□□□ 1.53
LINC00900-201ENST00000499809 CSRNP3Q8WYN3 585 aa24.59■■□□□ 1.53
LINC00900-201ENST00000499809 SYNJ1O43426 1573 aa24.52■■□□□ 1.52
LINC00900-201ENST00000499809 NCAPD3P42695 1498 aa24.5■■□□□ 1.51
LINC00900-201ENST00000499809 UBTFP17480 764 aaKnown RBP24.5■■□□□ 1.51
LINC00900-201ENST00000499809 EEA1Q15075 1411 aa24.47■■□□□ 1.51
LINC00900-201ENST00000499809 HMGXB3Q12766 1538 aa24.41■■□□□ 1.5
LINC00900-201ENST00000499809 CEP162Q5TB80 1403 aa24.4■■□□□ 1.5
LINC00900-201ENST00000499809 TNIKQ9UKE5 1360 aa24.39■■□□□ 1.49
LINC00900-201ENST00000499809 TTBK1Q5TCY1 1321 aaPredicted RBP24.34■■□□□ 1.49
LINC00900-201ENST00000499809 GOLGA3Q08378 1498 aa24.31■■□□□ 1.48
LINC00900-201ENST00000499809 TOP2BQ02880 1626 aa24.23■■□□□ 1.47
LINC00900-201ENST00000499809 CEP164Q9UPV0 1460 aa24.21■■□□□ 1.47
LINC00900-201ENST00000499809 CFTRP13569 1480 aa24.19■■□□□ 1.46
LINC00900-201ENST00000499809 RANGAP1P46060 587 aaPredicted RBP24.18■■□□□ 1.46
LINC00900-201ENST00000499809 RAPGEF2Q9Y4G8 1499 aa24.14■■□□□ 1.45
LINC00900-201ENST00000499809 CUX1P39880 1505 aa24.12■■□□□ 1.45
LINC00900-201ENST00000499809 KIF21BO75037 1637 aa24.12■■□□□ 1.45
LINC00900-201ENST00000499809 BIVM-ERCC5R4GMW8 1640 aa24.11■■□□□ 1.45
LINC00900-201ENST00000499809 CC2D2AQ9P2K1 1620 aa24.1■■□□□ 1.45
LINC00900-201ENST00000499809 ZEB1P37275 1124 aaPredicted RBP24.08■■□□□ 1.45
LINC00900-201ENST00000499809 CLIP1P30622 1438 aa24.05■■□□□ 1.44
LINC00900-201ENST00000499809 CADPSQ9ULU8 1353 aa24.04■■□□□ 1.44
LINC00900-201ENST00000499809 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.01■■□□□ 1.43
LINC00900-201ENST00000499809 KIF27Q86VH2 1401 aa23.94■■□□□ 1.42
LINC00900-201ENST00000499809 PRXQ9BXM0 1461 aa23.92■■□□□ 1.42
LINC00900-201ENST00000499809 CCER1Q8TC90 406 aaPredicted RBP23.9■■□□□ 1.42
LINC00900-201ENST00000499809 VPS8Q8N3P4 1428 aa23.87■■□□□ 1.41
LINC00900-201ENST00000499809 APLP2Q06481 763 aa23.84■■□□□ 1.41
LINC00900-201ENST00000499809 PRDM2Q13029 1718 aa23.83■■□□□ 1.41
LINC00900-201ENST00000499809 ERICH3Q5RHP9 1530 aa23.82■■□□□ 1.4
LINC00900-201ENST00000499809 CUX2O14529 1486 aa23.81■■□□□ 1.4
LINC00900-201ENST00000499809 FANCD2Q9BXW9 1451 aa23.79■■□□□ 1.4
LINC00900-201ENST00000499809 FGD5Q6ZNL6 1462 aa23.78■■□□□ 1.4
LINC00900-201ENST00000499809 NESP48681 1621 aa23.77■■□□□ 1.4
LINC00900-201ENST00000499809 IGF1RP08069 1367 aa23.74■■□□□ 1.39
LINC00900-201ENST00000499809 DNAJC5BQ9UF47 199 aa23.74■■□□□ 1.39
LINC00900-201ENST00000499809 HNRNPUL2Q1KMD3 747 aaKnown RBP23.71■■□□□ 1.39
LINC00900-201ENST00000499809 ARAP1Q96P48 1450 aa23.68■■□□□ 1.38
LINC00900-201ENST00000499809 PELP1Q8IZL8 1130 aaKnown RBP23.66■■□□□ 1.38
LINC00900-201ENST00000499809 CARMIL1Q5VZK9 1371 aa23.63■■□□□ 1.37
LINC00900-201ENST00000499809 RAD54L2Q9Y4B4 1467 aa23.62■■□□□ 1.37
LINC00900-201ENST00000499809 KANK4Q5T7N3 995 aaPredicted RBP23.59■■□□□ 1.37
LINC00900-201ENST00000499809 TOPBP1Q92547 1522 aa23.57■■□□□ 1.36
LINC00900-201ENST00000499809 ARHGAP35Q9NRY4 1499 aa23.56■■□□□ 1.36
LINC00900-201ENST00000499809 DNMBPQ6XZF7 1577 aa23.56■■□□□ 1.36
LINC00900-201ENST00000499809 POLA1P09884 1462 aaPredicted RBP23.54■■□□□ 1.36
LINC00900-201ENST00000499809 LAMC3Q9Y6N6 1575 aa23.47■■□□□ 1.35
LINC00900-201ENST00000499809 ABCA10Q8WWZ4 1543 aa23.46■■□□□ 1.35
LINC00900-201ENST00000499809 P3H3Q8IVL6 736 aa23.46■■□□□ 1.35
LINC00900-201ENST00000499809 URB2Q14146 1524 aaKnown RBP23.46■■□□□ 1.35
LINC00900-201ENST00000499809 PDS5BQ9NTI5 1447 aa23.41■■□□□ 1.34
LINC00900-201ENST00000499809 TDRD9Q8NDG6 1382 aaKnown RBP23.39■■□□□ 1.34
LINC00900-201ENST00000499809 ATP1B4Q9UN42 357 aaPredicted RBP23.34■■□□□ 1.33
LINC00900-201ENST00000499809 ITGAEP38570 1179 aa23.28■■□□□ 1.32
LINC00900-201ENST00000499809 KIF21AQ7Z4S6 1674 aa23.27■■□□□ 1.32
LINC00900-201ENST00000499809 FHOD3Q2V2M9 1422 aa23.25■■□□□ 1.31
LINC00900-201ENST00000499809 GAPVD1Q14C86 1478 aa23.23■■□□□ 1.31
LINC00900-201ENST00000499809 RRBP1Q9P2E9 1410 aaKnown RBP23.23■■□□□ 1.31
LINC00900-201ENST00000499809 CUL7Q14999 1698 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms