RNA–Protein interactions for RNA: ENST00000355665.7

YTHDC1-202, Transcript of YTH domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YTHDC1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDC1-202ENST00000355665 NISCHQ9Y2I1 1504 aa29.6■■■□□ 2.33
YTHDC1-202ENST00000355665 SHROOM4Q9ULL8 1493 aa26.4■■□□□ 1.82
YTHDC1-202ENST00000355665 SUPT5HO00267 1087 aaKnown RBP26.13■■□□□ 1.77
YTHDC1-202ENST00000355665 HRCP23327 699 aa25.45■■□□□ 1.66
YTHDC1-202ENST00000355665 MYO15BQ96JP2 1530 aa25.38■■□□□ 1.65
YTHDC1-202ENST00000355665 PCGF6Q9BYE7 350 aa25.37■■□□□ 1.65
YTHDC1-202ENST00000355665 CHIC1Q5VXU3 224 aa25.33■■□□□ 1.65
YTHDC1-202ENST00000355665 DCAF8L2P0C7V8 631 aa25.31■■□□□ 1.64
YTHDC1-202ENST00000355665 PPARGC1BQ86YN6 1023 aaKnown RBP25.23■■□□□ 1.63
YTHDC1-202ENST00000355665 ZCCHC6Q5VYS8 1495 aaKnown RBP25.08■■□□□ 1.6
YTHDC1-202ENST00000355665 LOC105371045A0A1W2PR82 267 aa24.9■■□□□ 1.58
YTHDC1-202ENST00000355665 CCDC180Q9P1Z9 1646 aa24.53■■□□□ 1.52
YTHDC1-202ENST00000355665 DCAF1Q9Y4B6 1507 aa24.49■■□□□ 1.51
YTHDC1-202ENST00000355665 TRIM26Q12899 539 aaPredicted RBP24.44■■□□□ 1.5
YTHDC1-202ENST00000355665 EHMT2Q96KQ7 1210 aa24.33■■□□□ 1.49
YTHDC1-202ENST00000355665 FAM9AQ8IZU1 332 aaPredicted RBP24.25■■□□□ 1.47
YTHDC1-202ENST00000355665 TRIM41Q8WV44 630 aa24.07■■□□□ 1.44
YTHDC1-202ENST00000355665 ZEB1P37275 1124 aaPredicted RBP23.97■■□□□ 1.43
YTHDC1-202ENST00000355665 SCAF1Q9H7N4 1312 aaKnown RBP23.94■■□□□ 1.42
YTHDC1-202ENST00000355665 RSF1Q96T23 1441 aaPredicted RBP23.79■■□□□ 1.4
YTHDC1-202ENST00000355665 ABCC9O60706 1549 aa23.74■■□□□ 1.39
YTHDC1-202ENST00000355665 PELP1Q8IZL8 1130 aaKnown RBP23.7■■□□□ 1.38
YTHDC1-202ENST00000355665 SCRIBQ14160 1630 aa23.68■■□□□ 1.38
YTHDC1-202ENST00000355665 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.68■■□□□ 1.38
YTHDC1-202ENST00000355665 RB1CC1Q8TDY2 1594 aa23.65■■□□□ 1.38
YTHDC1-202ENST00000355665 TTBK1Q5TCY1 1321 aaPredicted RBP23.62■■□□□ 1.37
YTHDC1-202ENST00000355665 CCER1Q8TC90 406 aaPredicted RBP23.57■■□□□ 1.36
YTHDC1-202ENST00000355665 NEUROD1Q13562 356 aa23.47■■□□□ 1.35
YTHDC1-202ENST00000355665 ACIN1Q9UKV3 1341 aaKnown RBP23.41■■□□□ 1.34
YTHDC1-202ENST00000355665 CECR2Q9BXF3 1484 aa23.34■■□□□ 1.33
YTHDC1-202ENST00000355665 GTF3C3Q9Y5Q9 886 aa23.32■■□□□ 1.32
YTHDC1-202ENST00000355665 DIEXFQ68CQ4 756 aaKnown RBP23.32■■□□□ 1.32
YTHDC1-202ENST00000355665 MROH2BQ7Z745 1585 aa23.2■■□□□ 1.31
YTHDC1-202ENST00000355665 CENPBP07199 599 aaPredicted RBP23.17■■□□□ 1.3
YTHDC1-202ENST00000355665 YTHDC1Q96MU7 727 aaKnown RBP23.14■■□□□ 1.29
YTHDC1-202ENST00000355665 WIZO95785 1651 aa23.09■■□□□ 1.29
YTHDC1-202ENST00000355665 UBTFP17480 764 aaKnown RBP22.96■■□□□ 1.27
YTHDC1-202ENST00000355665 ABCC8Q09428 1581 aa22.93■■□□□ 1.26
YTHDC1-202ENST00000355665 CEP162Q5TB80 1403 aa22.91■■□□□ 1.26
YTHDC1-202ENST00000355665 CCDC88BA6NC98 1476 aa22.91■■□□□ 1.26
YTHDC1-202ENST00000355665 ZNF316A6NFI3 1004 aaPredicted RBP22.89■■□□□ 1.26
YTHDC1-202ENST00000355665 HNRNPUL2Q1KMD3 747 aaKnown RBP22.87■■□□□ 1.25
YTHDC1-202ENST00000355665 SOGA1O94964 1423 aa22.87■■□□□ 1.25
YTHDC1-202ENST00000355665 MIER1Q8N108 512 aa22.8■■□□□ 1.24
YTHDC1-202ENST00000355665 WRNQ14191 1432 aaPredicted RBP eCLIP22.76■■□□□ 1.239e-6■■■■■ 50.1
YTHDC1-202ENST00000355665 RANGAP1P46060 587 aaPredicted RBP22.75■■□□□ 1.23
YTHDC1-202ENST00000355665 BAZ1AQ9NRL2 1556 aaPredicted RBP22.75■■□□□ 1.23
YTHDC1-202ENST00000355665 CSRNP3Q8WYN3 585 aa22.74■■□□□ 1.23
YTHDC1-202ENST00000355665 RUSC2Q8N2Y8 1516 aa22.74■■□□□ 1.23
YTHDC1-202ENST00000355665 NACADO15069 1562 aa22.73■■□□□ 1.23
YTHDC1-202ENST00000355665 EIF4G1Q04637 1599 aaKnown RBP22.71■■□□□ 1.23
YTHDC1-202ENST00000355665 TNIKQ9UKE5 1360 aa22.69■■□□□ 1.22
YTHDC1-202ENST00000355665 MYT1Q01538 1121 aa22.53■■□□□ 1.2
YTHDC1-202ENST00000355665 TOP2AP11388 1531 aaKnown RBP22.53■■□□□ 1.2
YTHDC1-202ENST00000355665 SMARCA2P51531 1590 aa22.5■■□□□ 1.19
YTHDC1-202ENST00000355665 GOLGA3Q08378 1498 aa22.48■■□□□ 1.19
YTHDC1-202ENST00000355665 APLP2Q06481 763 aa22.48■■□□□ 1.19
YTHDC1-202ENST00000355665 PABPN1Q86U42 306 aaKnown RBP eCLIP22.41■■□□□ 1.18
YTHDC1-202ENST00000355665 EEA1Q15075 1411 aa22.41■■□□□ 1.18
YTHDC1-202ENST00000355665 SMARCA4P51532 1647 aa22.4■■□□□ 1.18
YTHDC1-202ENST00000355665 CLIP1P30622 1438 aa22.38■■□□□ 1.17
YTHDC1-202ENST00000355665 CEP164Q9UPV0 1460 aa22.26■■□□□ 1.15
YTHDC1-202ENST00000355665 VPS8Q8N3P4 1428 aa22.24■■□□□ 1.15
YTHDC1-202ENST00000355665 SUPT16HQ9Y5B9 1047 aaKnown RBP22.22■■□□□ 1.15
YTHDC1-202ENST00000355665 RAPGEF2Q9Y4G8 1499 aa22.21■■□□□ 1.15
YTHDC1-202ENST00000355665 ITGAEP38570 1179 aa22.18■■□□□ 1.14
YTHDC1-202ENST00000355665 SYNJ1O43426 1573 aa22.17■■□□□ 1.14
YTHDC1-202ENST00000355665 KANK4Q5T7N3 995 aaPredicted RBP22.12■■□□□ 1.13
YTHDC1-202ENST00000355665 DHX57Q6P158 1386 aaKnown RBP22.11■■□□□ 1.13
YTHDC1-202ENST00000355665 KCNH8Q96L42 1107 aa22.09■■□□□ 1.13
YTHDC1-202ENST00000355665 BCANQ96GW7 911 aa22.08■■□□□ 1.12
YTHDC1-202ENST00000355665 KIF21BO75037 1637 aa22.06■■□□□ 1.12
YTHDC1-202ENST00000355665 TSHZ2Q9NRE2 1034 aa22■■□□□ 1.11
YTHDC1-202ENST00000355665 UNC13AQ9UPW8 1703 aa21.99■■□□□ 1.11
YTHDC1-202ENST00000355665 BAZ1BQ9UIG0 1483 aaKnown RBP21.94■■□□□ 1.1
YTHDC1-202ENST00000355665 CLSPNQ9HAW4 1339 aa21.92■■□□□ 1.1
YTHDC1-202ENST00000355665 ARAP1Q96P48 1450 aa21.85■■□□□ 1.09
YTHDC1-202ENST00000355665 DDX10Q13206 875 aaKnown RBP21.84■■□□□ 1.09
YTHDC1-202ENST00000355665 HIRIP3Q9BW71 556 aaPredicted RBP21.84■■□□□ 1.09
YTHDC1-202ENST00000355665 FKBP8Q14318 412 aa21.83■■□□□ 1.09
YTHDC1-202ENST00000355665 ATAD2BQ9ULI0 1458 aa21.81■■□□□ 1.08
YTHDC1-202ENST00000355665 ANP32EQ9BTT0 268 aa21.78■■□□□ 1.08
YTHDC1-202ENST00000355665 CCNB3Q8WWL7 1395 aa21.78■■□□□ 1.08
YTHDC1-202ENST00000355665 BICRAQ9NZM4 1560 aa21.78■■□□□ 1.08
YTHDC1-202ENST00000355665 SIN3AQ96ST3 1273 aa21.77■■□□□ 1.08
YTHDC1-202ENST00000355665 TRIM52Q96A61 297 aa21.73■■□□□ 1.07
YTHDC1-202ENST00000355665 RAB3GAP2Q9H2M9 1393 aa21.73■■□□□ 1.07
YTHDC1-202ENST00000355665 RRBP1Q9P2E9 1410 aaKnown RBP21.72■■□□□ 1.07
YTHDC1-202ENST00000355665 ATP1B4Q9UN42 357 aaPredicted RBP21.7■■□□□ 1.07
YTHDC1-202ENST00000355665 PRXQ9BXM0 1461 aa21.7■■□□□ 1.07
YTHDC1-202ENST00000355665 FAM50AQ14320 339 aaKnown RBP21.7■■□□□ 1.06
YTHDC1-202ENST00000355665 PEG3Q9GZU2 1588 aa21.7■■□□□ 1.06
YTHDC1-202ENST00000355665 TOP2BQ02880 1626 aa21.68■■□□□ 1.06
YTHDC1-202ENST00000355665 P3H3Q8IVL6 736 aa21.63■■□□□ 1.05
YTHDC1-202ENST00000355665 NEFLP07196 543 aa21.61■■□□□ 1.05
YTHDC1-202ENST00000355665 ERICH3Q5RHP9 1530 aa21.6■■□□□ 1.05
YTHDC1-202ENST00000355665 ARHGAP35Q9NRY4 1499 aa21.59■■□□□ 1.05
YTHDC1-202ENST00000355665 KIF27Q86VH2 1401 aa21.58■■□□□ 1.04
YTHDC1-202ENST00000355665 MAPKBP1O60336 1514 aa21.58■■□□□ 1.04
YTHDC1-202ENST00000355665 WDR97A6NE52 1622 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms