RNA–Protein interactions for RNA: ENST00000535552.5

STRA6-207, Transcript of stimulated by retinoic acid 6, humanhuman

TSL 2 BASIC

Gene STRA6, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRA6-207ENST00000535552 NISCHQ9Y2I1 1504 aa31.07■■■□□ 2.56
STRA6-207ENST00000535552 SHROOM4Q9ULL8 1493 aa27.04■■□□□ 1.92
STRA6-207ENST00000535552 SUPT5HO00267 1087 aaKnown RBP26.59■■□□□ 1.85
STRA6-207ENST00000535552 ZCCHC6Q5VYS8 1495 aaKnown RBP26.27■■□□□ 1.8
STRA6-207ENST00000535552 DCAF8L2P0C7V8 631 aa26.25■■□□□ 1.79
STRA6-207ENST00000535552 CCDC180Q9P1Z9 1646 aa26.12■■□□□ 1.77
STRA6-207ENST00000535552 CHIC1Q5VXU3 224 aa25.74■■□□□ 1.71
STRA6-207ENST00000535552 MYO15BQ96JP2 1530 aa25.67■■□□□ 1.7
STRA6-207ENST00000535552 DCAF1Q9Y4B6 1507 aa25.29■■□□□ 1.64
STRA6-207ENST00000535552 PCGF6Q9BYE7 350 aa25.26■■□□□ 1.63
STRA6-207ENST00000535552 HRCP23327 699 aa25.19■■□□□ 1.62
STRA6-207ENST00000535552 LOC105371045A0A1W2PR82 267 aa25.16■■□□□ 1.62
STRA6-207ENST00000535552 PPARGC1BQ86YN6 1023 aaKnown RBP24.87■■□□□ 1.57
STRA6-207ENST00000535552 SCRIBQ14160 1630 aa24.85■■□□□ 1.57
STRA6-207ENST00000535552 ABCC9O60706 1549 aa24.8■■□□□ 1.56
STRA6-207ENST00000535552 RSF1Q96T23 1441 aaPredicted RBP24.74■■□□□ 1.55
STRA6-207ENST00000535552 FAM9AQ8IZU1 332 aaPredicted RBP24.64■■□□□ 1.53
STRA6-207ENST00000535552 TRIM41Q8WV44 630 aa24.63■■□□□ 1.53
STRA6-207ENST00000535552 EHMT2Q96KQ7 1210 aa24.59■■□□□ 1.53
STRA6-207ENST00000535552 TRIM26Q12899 539 aaPredicted RBP24.56■■□□□ 1.52
STRA6-207ENST00000535552 RB1CC1Q8TDY2 1594 aa24.5■■□□□ 1.51
STRA6-207ENST00000535552 CECR2Q9BXF3 1484 aa24.39■■□□□ 1.49
STRA6-207ENST00000535552 MROH2BQ7Z745 1585 aa24.26■■□□□ 1.47
STRA6-207ENST00000535552 NACADO15069 1562 aa24.22■■□□□ 1.47
STRA6-207ENST00000535552 WIZO95785 1651 aa24.12■■□□□ 1.45
STRA6-207ENST00000535552 ZEB1P37275 1124 aaPredicted RBP23.99■■□□□ 1.43
STRA6-207ENST00000535552 BAZ1AQ9NRL2 1556 aaPredicted RBP23.84■■□□□ 1.41
STRA6-207ENST00000535552 TTBK1Q5TCY1 1321 aaPredicted RBP23.79■■□□□ 1.4
STRA6-207ENST00000535552 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.73■■□□□ 1.39
STRA6-207ENST00000535552 ABCC8Q09428 1581 aa23.73■■□□□ 1.39
STRA6-207ENST00000535552 EIF4G1Q04637 1599 aaKnown RBP23.69■■□□□ 1.38
STRA6-207ENST00000535552 CCDC88BA6NC98 1476 aa23.68■■□□□ 1.38
STRA6-207ENST00000535552 PABPN1Q86U42 306 aaKnown RBP eCLIP23.63■■□□□ 1.37
STRA6-207ENST00000535552 TOP2AP11388 1531 aaKnown RBP23.63■■□□□ 1.37
STRA6-207ENST00000535552 CCER1Q8TC90 406 aaPredicted RBP23.63■■□□□ 1.37
STRA6-207ENST00000535552 SMARCA4P51532 1647 aa23.61■■□□□ 1.37
STRA6-207ENST00000535552 SOGA1O94964 1423 aa23.57■■□□□ 1.36
STRA6-207ENST00000535552 SMARCA2P51531 1590 aa23.55■■□□□ 1.36
STRA6-207ENST00000535552 UBTFP17480 764 aaKnown RBP23.5■■□□□ 1.35
STRA6-207ENST00000535552 CEP162Q5TB80 1403 aa23.47■■□□□ 1.35
STRA6-207ENST00000535552 UNC13AQ9UPW8 1703 aa23.46■■□□□ 1.35
STRA6-207ENST00000535552 RUSC2Q8N2Y8 1516 aa23.46■■□□□ 1.35
STRA6-207ENST00000535552 CSRNP3Q8WYN3 585 aa23.44■■□□□ 1.34
STRA6-207ENST00000535552 SCAF1Q9H7N4 1312 aaKnown RBP23.39■■□□□ 1.33
STRA6-207ENST00000535552 TNIKQ9UKE5 1360 aa23.35■■□□□ 1.33
STRA6-207ENST00000535552 WRNQ14191 1432 aaPredicted RBP eCLIP23.33■■□□□ 1.33
STRA6-207ENST00000535552 BICRAQ9NZM4 1560 aa23.23■■□□□ 1.31
STRA6-207ENST00000535552 EEA1Q15075 1411 aa23.23■■□□□ 1.31
STRA6-207ENST00000535552 RANGAP1P46060 587 aaPredicted RBP23.22■■□□□ 1.31
STRA6-207ENST00000535552 DIEXFQ68CQ4 756 aaKnown RBP23.2■■□□□ 1.3
STRA6-207ENST00000535552 GOLGA3Q08378 1498 aa23.19■■□□□ 1.3
STRA6-207ENST00000535552 HNRNPUL2Q1KMD3 747 aaKnown RBP23.13■■□□□ 1.29
STRA6-207ENST00000535552 NEUROD1Q13562 356 aa23.1■■□□□ 1.29
STRA6-207ENST00000535552 SYNJ1O43426 1573 aa23.09■■□□□ 1.29
STRA6-207ENST00000535552 ACIN1Q9UKV3 1341 aaKnown RBP23.06■■□□□ 1.28
STRA6-207ENST00000535552 ATAD2BQ9ULI0 1458 aa23.04■■□□□ 1.28
STRA6-207ENST00000535552 CEP164Q9UPV0 1460 aa23.02■■□□□ 1.28
STRA6-207ENST00000535552 CLIP1P30622 1438 aa23.02■■□□□ 1.27
STRA6-207ENST00000535552 BAZ1BQ9UIG0 1483 aaKnown RBP23.01■■□□□ 1.27
STRA6-207ENST00000535552 PEG3Q9GZU2 1588 aa23.01■■□□□ 1.27
STRA6-207ENST00000535552 APLP2Q06481 763 aa22.96■■□□□ 1.27
STRA6-207ENST00000535552 RAPGEF2Q9Y4G8 1499 aa22.94■■□□□ 1.26
STRA6-207ENST00000535552 ZNF316A6NFI3 1004 aaPredicted RBP22.93■■□□□ 1.26
STRA6-207ENST00000535552 KIF21BO75037 1637 aa22.89■■□□□ 1.25
STRA6-207ENST00000535552 CENPBP07199 599 aaPredicted RBP22.89■■□□□ 1.25
STRA6-207ENST00000535552 GTF3C3Q9Y5Q9 886 aa22.89■■□□□ 1.25
STRA6-207ENST00000535552 VPS8Q8N3P4 1428 aa22.86■■□□□ 1.25
STRA6-207ENST00000535552 YTHDC1Q96MU7 727 aaKnown RBP22.85■■□□□ 1.25
STRA6-207ENST00000535552 PELP1Q8IZL8 1130 aaKnown RBP22.81■■□□□ 1.24
STRA6-207ENST00000535552 MIER1Q8N108 512 aa22.72■■□□□ 1.23
STRA6-207ENST00000535552 TOP2BQ02880 1626 aa22.7■■□□□ 1.22
STRA6-207ENST00000535552 KANK4Q5T7N3 995 aaPredicted RBP22.66■■□□□ 1.22
STRA6-207ENST00000535552 PRXQ9BXM0 1461 aa22.58■■□□□ 1.2
STRA6-207ENST00000535552 ARAP1Q96P48 1450 aa22.57■■□□□ 1.2
STRA6-207ENST00000535552 CUX1P39880 1505 aa22.55■■□□□ 1.2
STRA6-207ENST00000535552 BIVM-ERCC5R4GMW8 1640 aa22.55■■□□□ 1.2
STRA6-207ENST00000535552 ITGAEP38570 1179 aa22.53■■□□□ 1.2
STRA6-207ENST00000535552 KIF27Q86VH2 1401 aa22.5■■□□□ 1.19
STRA6-207ENST00000535552 ERICH3Q5RHP9 1530 aa22.49■■□□□ 1.19
STRA6-207ENST00000535552 NCAPD3P42695 1498 aa22.49■■□□□ 1.19
STRA6-207ENST00000535552 DHX57Q6P158 1386 aaKnown RBP22.47■■□□□ 1.19
STRA6-207ENST00000535552 HMGXB3Q12766 1538 aa22.41■■□□□ 1.18
STRA6-207ENST00000535552 CFTRP13569 1480 aa22.39■■□□□ 1.17
STRA6-207ENST00000535552 ARHGAP35Q9NRY4 1499 aa22.36■■□□□ 1.17
STRA6-207ENST00000535552 CUX2O14529 1486 aa22.32■■□□□ 1.16
STRA6-207ENST00000535552 CLSPNQ9HAW4 1339 aa22.32■■□□□ 1.16
STRA6-207ENST00000535552 CCNB3Q8WWL7 1395 aa22.32■■□□□ 1.16
STRA6-207ENST00000535552 RRBP1Q9P2E9 1410 aaKnown RBP22.31■■□□□ 1.16
STRA6-207ENST00000535552 P3H3Q8IVL6 736 aa22.28■■□□□ 1.16
STRA6-207ENST00000535552 IGF1RP08069 1367 aa22.28■■□□□ 1.16
STRA6-207ENST00000535552 ATP1B4Q9UN42 357 aaPredicted RBP22.27■■□□□ 1.16
STRA6-207ENST00000535552 CARMIL1Q5VZK9 1371 aa22.21■■□□□ 1.15
STRA6-207ENST00000535552 FAM50AQ14320 339 aaKnown RBP22.18■■□□□ 1.14
STRA6-207ENST00000535552 CADPSQ9ULU8 1353 aa22.18■■□□□ 1.14
STRA6-207ENST00000535552 RAB3GAP2Q9H2M9 1393 aa22.17■■□□□ 1.14
STRA6-207ENST00000535552 FGD5Q6ZNL6 1462 aa22.15■■□□□ 1.14
STRA6-207ENST00000535552 PHLDB1Q86UU1 1377 aa22.09■■□□□ 1.13
STRA6-207ENST00000535552 SIN3AQ96ST3 1273 aa22.09■■□□□ 1.13
STRA6-207ENST00000535552 TIAM1Q13009 1591 aa22.07■■□□□ 1.12
STRA6-207ENST00000535552 KCNH8Q96L42 1107 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms