RNA–Protein interactions for RNA: ENST00000471863.5

PTK7-210, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best) BASIC

Gene PTK7, Length 2,412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-210ENST00000471863 NISCHQ9Y2I1 1504 aa30.99■■■□□ 2.55
PTK7-210ENST00000471863 CCDC180Q9P1Z9 1646 aa26.98■■□□□ 1.91
PTK7-210ENST00000471863 SHROOM4Q9ULL8 1493 aa26.59■■□□□ 1.85
PTK7-210ENST00000471863 ZCCHC6Q5VYS8 1495 aaKnown RBP26.26■■□□□ 1.8
PTK7-210ENST00000471863 SUPT5HO00267 1087 aaKnown RBP26.13■■□□□ 1.77
PTK7-210ENST00000471863 ABCC9O60706 1549 aa25.71■■□□□ 1.71
PTK7-210ENST00000471863 DCAF8L2P0C7V8 631 aa25.63■■□□□ 1.69
PTK7-210ENST00000471863 MYO15BQ96JP2 1530 aa25.56■■□□□ 1.68
PTK7-210ENST00000471863 CHIC1Q5VXU3 224 aa25.52■■□□□ 1.68
PTK7-210ENST00000471863 DCAF1Q9Y4B6 1507 aa25.5■■□□□ 1.67
PTK7-210ENST00000471863 NACADO15069 1562 aa25.17■■□□□ 1.62
PTK7-210ENST00000471863 HRCP23327 699 aa25.04■■□□□ 1.6
PTK7-210ENST00000471863 RB1CC1Q8TDY2 1594 aa25■■□□□ 1.59
PTK7-210ENST00000471863 PCGF6Q9BYE7 350 aa24.9■■□□□ 1.58
PTK7-210ENST00000471863 SCRIBQ14160 1630 aa24.82■■□□□ 1.56
PTK7-210ENST00000471863 LOC105371045A0A1W2PR82 267 aa24.79■■□□□ 1.56
PTK7-210ENST00000471863 RSF1Q96T23 1441 aaPredicted RBP24.61■■□□□ 1.53
PTK7-210ENST00000471863 PPARGC1BQ86YN6 1023 aaKnown RBP24.56■■□□□ 1.52
PTK7-210ENST00000471863 UNC13AQ9UPW8 1703 aa24.56■■□□□ 1.52
PTK7-210ENST00000471863 TRIM26Q12899 539 aaPredicted RBP24.34■■□□□ 1.49
PTK7-210ENST00000471863 TRIM41Q8WV44 630 aa24.28■■□□□ 1.48
PTK7-210ENST00000471863 BICRAQ9NZM4 1560 aa24.27■■□□□ 1.48
PTK7-210ENST00000471863 PABPN1Q86U42 306 aaKnown RBP eCLIP24.23■■□□□ 1.47
PTK7-210ENST00000471863 CECR2Q9BXF3 1484 aa24.21■■□□□ 1.47
PTK7-210ENST00000471863 FAM9AQ8IZU1 332 aaPredicted RBP24.14■■□□□ 1.46
PTK7-210ENST00000471863 MROH2BQ7Z745 1585 aa24.14■■□□□ 1.45
PTK7-210ENST00000471863 WIZO95785 1651 aa24.03■■□□□ 1.44
PTK7-210ENST00000471863 EHMT2Q96KQ7 1210 aa23.96■■□□□ 1.43
PTK7-210ENST00000471863 BAZ1AQ9NRL2 1556 aaPredicted RBP23.86■■□□□ 1.41
PTK7-210ENST00000471863 ZEB1P37275 1124 aaPredicted RBP23.82■■□□□ 1.4
PTK7-210ENST00000471863 EIF4G1Q04637 1599 aaKnown RBP23.82■■□□□ 1.4
PTK7-210ENST00000471863 SMARCA4P51532 1647 aa23.77■■□□□ 1.4
PTK7-210ENST00000471863 TOP2AP11388 1531 aaKnown RBP23.61■■□□□ 1.37
PTK7-210ENST00000471863 ABCC8Q09428 1581 aa23.57■■□□□ 1.36
PTK7-210ENST00000471863 CCDC88BA6NC98 1476 aa23.53■■□□□ 1.36
PTK7-210ENST00000471863 SMARCA2P51531 1590 aa23.52■■□□□ 1.36
PTK7-210ENST00000471863 PEG3Q9GZU2 1588 aa23.47■■□□□ 1.35
PTK7-210ENST00000471863 ATAD2BQ9ULI0 1458 aa23.42■■□□□ 1.34
PTK7-210ENST00000471863 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.39■■□□□ 1.34
PTK7-210ENST00000471863 SOGA1O94964 1423 aa23.37■■□□□ 1.33
PTK7-210ENST00000471863 WRNQ14191 1432 aaPredicted RBP eCLIP23.34■■□□□ 1.33
PTK7-210ENST00000471863 CEP162Q5TB80 1403 aa23.33■■□□□ 1.33
PTK7-210ENST00000471863 BAZ1BQ9UIG0 1483 aaKnown RBP23.28■■□□□ 1.32
PTK7-210ENST00000471863 CCER1Q8TC90 406 aaPredicted RBP23.28■■□□□ 1.32
PTK7-210ENST00000471863 RUSC2Q8N2Y8 1516 aa23.27■■□□□ 1.32
PTK7-210ENST00000471863 CC2D2AQ9P2K1 1620 aa23.25■■□□□ 1.31
PTK7-210ENST00000471863 SCAF1Q9H7N4 1312 aaKnown RBP23.25■■□□□ 1.31
PTK7-210ENST00000471863 TNIKQ9UKE5 1360 aa23.24■■□□□ 1.31
PTK7-210ENST00000471863 NCAPD3P42695 1498 aa23.24■■□□□ 1.31
PTK7-210ENST00000471863 TTBK1Q5TCY1 1321 aaPredicted RBP23.24■■□□□ 1.31
PTK7-210ENST00000471863 HMGXB3Q12766 1538 aa23.18■■□□□ 1.3
PTK7-210ENST00000471863 EEA1Q15075 1411 aa23.18■■□□□ 1.3
PTK7-210ENST00000471863 CSRNP3Q8WYN3 585 aa23.18■■□□□ 1.3
PTK7-210ENST00000471863 UBTFP17480 764 aaKnown RBP23.1■■□□□ 1.29
PTK7-210ENST00000471863 GOLGA3Q08378 1498 aa23.08■■□□□ 1.29
PTK7-210ENST00000471863 SYNJ1O43426 1573 aa23.03■■□□□ 1.28
PTK7-210ENST00000471863 PELP1Q8IZL8 1130 aaKnown RBP22.99■■□□□ 1.27
PTK7-210ENST00000471863 DIEXFQ68CQ4 756 aaKnown RBP22.94■■□□□ 1.26
PTK7-210ENST00000471863 CEP164Q9UPV0 1460 aa22.92■■□□□ 1.26
PTK7-210ENST00000471863 KIF21BO75037 1637 aa22.92■■□□□ 1.26
PTK7-210ENST00000471863 ACIN1Q9UKV3 1341 aaKnown RBP22.89■■□□□ 1.25
PTK7-210ENST00000471863 NEUROD1Q13562 356 aa22.89■■□□□ 1.25
PTK7-210ENST00000471863 DNAJC5BQ9UF47 199 aa22.86■■□□□ 1.25
PTK7-210ENST00000471863 CLIP1P30622 1438 aa22.83■■□□□ 1.25
PTK7-210ENST00000471863 RAPGEF2Q9Y4G8 1499 aa22.79■■□□□ 1.24
PTK7-210ENST00000471863 VPS8Q8N3P4 1428 aa22.76■■□□□ 1.23
PTK7-210ENST00000471863 HNRNPUL2Q1KMD3 747 aaKnown RBP22.73■■□□□ 1.23
PTK7-210ENST00000471863 ZNF316A6NFI3 1004 aaPredicted RBP22.72■■□□□ 1.23
PTK7-210ENST00000471863 TOP2BQ02880 1626 aa22.69■■□□□ 1.22
PTK7-210ENST00000471863 CFTRP13569 1480 aa22.68■■□□□ 1.22
PTK7-210ENST00000471863 CENPBP07199 599 aaPredicted RBP22.66■■□□□ 1.22
PTK7-210ENST00000471863 GTF3C3Q9Y5Q9 886 aa22.66■■□□□ 1.22
PTK7-210ENST00000471863 CADPSQ9ULU8 1353 aa22.65■■□□□ 1.22
PTK7-210ENST00000471863 RANGAP1P46060 587 aaPredicted RBP22.63■■□□□ 1.21
PTK7-210ENST00000471863 BIVM-ERCC5R4GMW8 1640 aa22.61■■□□□ 1.21
PTK7-210ENST00000471863 PRDM2Q13029 1718 aa22.57■■□□□ 1.2
PTK7-210ENST00000471863 APLP2Q06481 763 aa22.56■■□□□ 1.2
PTK7-210ENST00000471863 NESP48681 1621 aa22.52■■□□□ 1.2
PTK7-210ENST00000471863 PRXQ9BXM0 1461 aa22.52■■□□□ 1.2
PTK7-210ENST00000471863 ERICH3Q5RHP9 1530 aa22.51■■□□□ 1.19
PTK7-210ENST00000471863 ARAP1Q96P48 1450 aa22.5■■□□□ 1.19
PTK7-210ENST00000471863 LAMC3Q9Y6N6 1575 aa22.48■■□□□ 1.19
PTK7-210ENST00000471863 MIER1Q8N108 512 aa22.47■■□□□ 1.19
PTK7-210ENST00000471863 CUX1P39880 1505 aa22.45■■□□□ 1.19
PTK7-210ENST00000471863 YTHDC1Q96MU7 727 aaKnown RBP22.43■■□□□ 1.18
PTK7-210ENST00000471863 FANCD2Q9BXW9 1451 aa22.4■■□□□ 1.18
PTK7-210ENST00000471863 KANK4Q5T7N3 995 aaPredicted RBP22.39■■□□□ 1.18
PTK7-210ENST00000471863 DHX57Q6P158 1386 aaKnown RBP22.35■■□□□ 1.17
PTK7-210ENST00000471863 KIF27Q86VH2 1401 aa22.32■■□□□ 1.16
PTK7-210ENST00000471863 PDS5BQ9NTI5 1447 aa22.32■■□□□ 1.16
PTK7-210ENST00000471863 RRBP1Q9P2E9 1410 aaKnown RBP22.27■■□□□ 1.16
PTK7-210ENST00000471863 CLSPNQ9HAW4 1339 aa22.27■■□□□ 1.15
PTK7-210ENST00000471863 KIF21AQ7Z4S6 1674 aa22.26■■□□□ 1.15
PTK7-210ENST00000471863 ARHGAP35Q9NRY4 1499 aa22.26■■□□□ 1.15
PTK7-210ENST00000471863 CUX2O14529 1486 aa22.17■■□□□ 1.14
PTK7-210ENST00000471863 DNMBPQ6XZF7 1577 aa22.15■■□□□ 1.14
PTK7-210ENST00000471863 CCNB3Q8WWL7 1395 aa22.14■■□□□ 1.14
PTK7-210ENST00000471863 TOPBP1Q92547 1522 aa22.13■■□□□ 1.13
PTK7-210ENST00000471863 URB2Q14146 1524 aaKnown RBP22.13■■□□□ 1.13
PTK7-210ENST00000471863 IGF1RP08069 1367 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms