RNA–Protein interactions for RNA: ENST00000393384.3

CRAT-202, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 2 BASIC

Gene CRAT, Length 973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-202ENST00000393384 NISCHQ9Y2I1 1504 aa47.13■■■■■ 5.14
CRAT-202ENST00000393384 ABCC9O60706 1549 aa42.56■■■■■ 4.4
CRAT-202ENST00000393384 CCDC180Q9P1Z9 1646 aa42.33■■■■■ 4.37
CRAT-202ENST00000393384 RB1CC1Q8TDY2 1594 aa40.44■■■■■ 4.06
CRAT-202ENST00000393384 DNAJC5BQ9UF47 199 aa40.15■■■■■ 4.02
CRAT-202ENST00000393384 NACADO15069 1562 aa40.1■■■■■ 4.01
CRAT-202ENST00000393384 DCAF8L2P0C7V8 631 aa39.76■■■■□ 3.96
CRAT-202ENST00000393384 PABPN1Q86U42 306 aaKnown RBP eCLIP39.57■■■■□ 3.93
CRAT-202ENST00000393384 MYO15BQ96JP2 1530 aa39.49■■■■□ 3.91
CRAT-202ENST00000393384 UNC13AQ9UPW8 1703 aa39.46■■■■□ 3.91
CRAT-202ENST00000393384 BICRAQ9NZM4 1560 aa39.22■■■■□ 3.87
CRAT-202ENST00000393384 ZCCHC6Q5VYS8 1495 aaKnown RBP39.14■■■■□ 3.86
CRAT-202ENST00000393384 DCAF1Q9Y4B6 1507 aa38.99■■■■□ 3.83
CRAT-202ENST00000393384 SHROOM4Q9ULL8 1493 aa38.78■■■■□ 3.8
CRAT-202ENST00000393384 SCRIBQ14160 1630 aa38.51■■■■□ 3.76
CRAT-202ENST00000393384 CC2D2AQ9P2K1 1620 aa38.45■■■■□ 3.75
CRAT-202ENST00000393384 CECR2Q9BXF3 1484 aa38.41■■■■□ 3.74
CRAT-202ENST00000393384 EIF4G1Q04637 1599 aaKnown RBP38.31■■■■□ 3.72
CRAT-202ENST00000393384 DNAJC5Q9H3Z4 198 aa37.14■■■■□ 3.54
CRAT-202ENST00000393384 NCAPD3P42695 1498 aa37.01■■■■□ 3.52
CRAT-202ENST00000393384 CUX2O14529 1486 aa36.88■■■■□ 3.49
CRAT-202ENST00000393384 ATAD2BQ9ULI0 1458 aa36.85■■■■□ 3.49
CRAT-202ENST00000393384 ERCC6Q03468 1493 aa36.82■■■■□ 3.49
CRAT-202ENST00000393384 SMARCA2P51531 1590 aa36.76■■■■□ 3.48
CRAT-202ENST00000393384 HMGXB3Q12766 1538 aa36.73■■■■□ 3.47
CRAT-202ENST00000393384 SMARCA4P51532 1647 aa36.73■■■■□ 3.47
CRAT-202ENST00000393384 BAZ1AQ9NRL2 1556 aaPredicted RBP36.57■■■■□ 3.45
CRAT-202ENST00000393384 BAZ1BQ9UIG0 1483 aaKnown RBP36.49■■■■□ 3.43
CRAT-202ENST00000393384 NESP48681 1621 aa36.46■■■■□ 3.43
CRAT-202ENST00000393384 PEG3Q9GZU2 1588 aa36.4■■■■□ 3.42
CRAT-202ENST00000393384 MROH2BQ7Z745 1585 aa36.3■■■■□ 3.4
CRAT-202ENST00000393384 LAMC3Q9Y6N6 1575 aa36.23■■■■□ 3.39
CRAT-202ENST00000393384 THOC2Q8NI27 1593 aaKnown RBP36.19■■■■□ 3.38
CRAT-202ENST00000393384 PDS5BQ9NTI5 1447 aa36.05■■■■□ 3.36
CRAT-202ENST00000393384 KIF21AQ7Z4S6 1674 aa36■■■■□ 3.35
CRAT-202ENST00000393384 WIZO95785 1651 aa35.94■■■■□ 3.34
CRAT-202ENST00000393384 CADPSQ9ULU8 1353 aa35.88■■■■□ 3.33
CRAT-202ENST00000393384 MRC2Q9UBG0 1479 aa35.73■■■■□ 3.31
CRAT-202ENST00000393384 RSF1Q96T23 1441 aaPredicted RBP35.68■■■■□ 3.3
CRAT-202ENST00000393384 WDR62O43379 1518 aa35.66■■■■□ 3.3
CRAT-202ENST00000393384 CEP164Q9UPV0 1460 aa35.54■■■■□ 3.28
CRAT-202ENST00000393384 TOP2AP11388 1531 aaKnown RBP35.49■■■■□ 3.27
CRAT-202ENST00000393384 FANCD2Q9BXW9 1451 aa35.46■■■■□ 3.27
CRAT-202ENST00000393384 CFTRP13569 1480 aa35.41■■■■□ 3.26
CRAT-202ENST00000393384 TRIM41Q8WV44 630 aa35.37■■■■□ 3.25
CRAT-202ENST00000393384 URB2Q14146 1524 aaKnown RBP35.16■■■■□ 3.22
CRAT-202ENST00000393384 OSCARQ8IYS5 282 aa35.12■■■■□ 3.21
CRAT-202ENST00000393384 PRDM2Q13029 1718 aa35.09■■■■□ 3.21
CRAT-202ENST00000393384 CCDC88BA6NC98 1476 aa35.06■■■■□ 3.2
CRAT-202ENST00000393384 IFT140Q96RY7 1462 aa34.85■■■■□ 3.17
CRAT-202ENST00000393384 ZNF608Q9ULD9 1512 aaPredicted RBP34.76■■■■□ 3.16
CRAT-202ENST00000393384 TOPBP1Q92547 1522 aa34.76■■■■□ 3.15
CRAT-202ENST00000393384 ABCC8Q09428 1581 aa34.7■■■■□ 3.15
CRAT-202ENST00000393384 RIMBP3CA6NJZ7 1639 aa34.66■■■■□ 3.14
CRAT-202ENST00000393384 RIMBP3BA6NNM3 1639 aa34.66■■■■□ 3.14
CRAT-202ENST00000393384 RIMBP3Q9UFD9 1639 aa34.66■■■■□ 3.14
CRAT-202ENST00000393384 DNMBPQ6XZF7 1577 aa34.62■■■■□ 3.13
CRAT-202ENST00000393384 EIF4G3O43432 1585 aaKnown RBP34.58■■■■□ 3.13
CRAT-202ENST00000393384 ARHGEF11O15085 1522 aa34.55■■■■□ 3.12
CRAT-202ENST00000393384 TARBP1Q13395 1621 aaKnown RBP34.44■■■■□ 3.1
CRAT-202ENST00000393384 AQRO60306 1485 aaKnown RBP eCLIP34.42■■■■□ 3.1
CRAT-202ENST00000393384 SUPT5HO00267 1087 aaKnown RBP34.38■■■■□ 3.09
CRAT-202ENST00000393384 POLA1P09884 1462 aaPredicted RBP34.38■■■■□ 3.09
CRAT-202ENST00000393384 CHD1O14646 1710 aa34.36■■■■□ 3.09
CRAT-202ENST00000393384 CYB5RLQ6IPT4 315 aa34.29■■■■□ 3.08
CRAT-202ENST00000393384 FBLN2P98095 1184 aa34.27■■■■□ 3.08
CRAT-202ENST00000393384 RAD54L2Q9Y4B4 1467 aa34.23■■■■□ 3.07
CRAT-202ENST00000393384 SOGA1O94964 1423 aa34.21■■■■□ 3.07
CRAT-202ENST00000393384 ARAP1Q96P48 1450 aa34.18■■■■□ 3.06
CRAT-202ENST00000393384 TDRD9Q8NDG6 1382 aaKnown RBP34.17■■■■□ 3.06
CRAT-202ENST00000393384 WDR97A6NE52 1622 aa34.15■■■■□ 3.06
CRAT-202ENST00000393384 FGD5Q6ZNL6 1462 aa34.11■■■■□ 3.05
CRAT-202ENST00000393384 CUX1P39880 1505 aa34.09■■■■□ 3.05
CRAT-202ENST00000393384 SNAPC4Q5SXM2 1469 aa34.08■■■■□ 3.05
CRAT-202ENST00000393384 MAGI1Q96QZ7 1491 aaPredicted RBP34.01■■■■□ 3.04
CRAT-202ENST00000393384 TRHP20396 242 aaPredicted RBP34.01■■■■□ 3.03
CRAT-202ENST00000393384 CHMP7Q8WUX9 453 aaPredicted RBP33.99■■■■□ 3.03
CRAT-202ENST00000393384 CLASP1Q7Z460 1538 aa33.99■■■■□ 3.03
CRAT-202ENST00000393384 GRIN2BQ13224 1484 aa33.97■■■■□ 3.03
CRAT-202ENST00000393384 SYNJ1O43426 1573 aa33.97■■■■□ 3.03
CRAT-202ENST00000393384 SYNJ2O15056 1496 aa33.89■■■■□ 3.02
CRAT-202ENST00000393384 GAPVD1Q14C86 1478 aa33.81■■■■□ 3
CRAT-202ENST00000393384 PBRM1Q86U86 1689 aa33.78■■■■□ 3
CRAT-202ENST00000393384 ABCA10Q8WWZ4 1543 aa33.74■■■□□ 2.99
CRAT-202ENST00000393384 BIVM-ERCC5R4GMW8 1640 aa33.72■■■□□ 2.99
CRAT-202ENST00000393384 TOP2BQ02880 1626 aa33.69■■■□□ 2.98
CRAT-202ENST00000393384 ABCA5Q8WWZ7 1642 aa33.69■■■□□ 2.98
CRAT-202ENST00000393384 WRNQ14191 1432 aaPredicted RBP eCLIP33.67■■■□□ 2.98
CRAT-202ENST00000393384 GRIN2AQ12879 1464 aa33.52■■■□□ 2.96
CRAT-202ENST00000393384 ADAMTS12P58397 1594 aa33.47■■■□□ 2.95
CRAT-202ENST00000393384 NUP160Q12769 1436 aa33.44■■■□□ 2.94
CRAT-202ENST00000393384 CEP170Q5SW79 1584 aa33.39■■■□□ 2.94
CRAT-202ENST00000393384 ERCC6L2Q5T890 1561 aa33.38■■■□□ 2.93
CRAT-202ENST00000393384 FHAD1B1AJZ9 1412 aa33.38■■■□□ 2.93
CRAT-202ENST00000393384 ERICH3Q5RHP9 1530 aa33.32■■■□□ 2.92
CRAT-202ENST00000393384 SHROOM2Q13796 1616 aa33.31■■■□□ 2.92
CRAT-202ENST00000393384 AEBP2Q6ZN18 517 aaPredicted RBP33.26■■■□□ 2.91
CRAT-202ENST00000393384 PRG4Q92954 1404 aaPredicted RBP33.11■■■□□ 2.89
CRAT-202ENST00000393384 JPH4Q96JJ6 628 aa33.08■■■□□ 2.89
CRAT-202ENST00000393384 KIF27Q86VH2 1401 aa33.01■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms