Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 TSPY5P-201ENST00000426936 936 ntBASIC15.11■□□□□ 0.01
HMG20AQ9NP66 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.11■□□□□ 0.01
HMG20AQ9NP66 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.11■□□□□ 0.01
HMG20AQ9NP66 AC092597.1-201ENST00000487352 616 ntBASIC15.11■□□□□ 0.01
HMG20AQ9NP66 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMG20AQ9NP66 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.11■□□□□ 0.01
HMG20AQ9NP66 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.11■□□□□ 0.01
HMG20AQ9NP66 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.11■□□□□ 0.01
HMG20AQ9NP66 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.11■□□□□ 0.01
HMG20AQ9NP66 AC009154.2-201ENST00000621177 724 ntBASIC15.11■□□□□ 0.01
HMG20AQ9NP66 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
HMG20AQ9NP66 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
HMG20AQ9NP66 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.11■□□□□ 0.01
HMG20AQ9NP66 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMG20AQ9NP66 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMG20AQ9NP66 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMG20AQ9NP66 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMG20AQ9NP66 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMG20AQ9NP66 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMG20AQ9NP66 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HMG20AQ9NP66 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMG20AQ9NP66 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HMG20AQ9NP66 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMG20AQ9NP66 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
HMG20AQ9NP66 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMG20AQ9NP66 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.11■□□□□ 0.01
HMG20AQ9NP66 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.11■□□□□ 0.01
HMG20AQ9NP66 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMG20AQ9NP66 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMG20AQ9NP66 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 MYO15B-237ENST00000642007 4893 ntBASIC15.1■□□□□ 0.01
HMG20AQ9NP66 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 TSPY12P-201ENST00000421279 868 ntBASIC15.1■□□□□ 0.01
HMG20AQ9NP66 KRT18P57-201ENST00000443599 1254 ntBASIC15.1■□□□□ 0.01
HMG20AQ9NP66 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.1■□□□□ 0.01
HMG20AQ9NP66 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMG20AQ9NP66 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMG20AQ9NP66 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HMG20AQ9NP66 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMG20AQ9NP66 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
HMG20AQ9NP66 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMG20AQ9NP66 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMG20AQ9NP66 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMG20AQ9NP66 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HMG20AQ9NP66 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMG20AQ9NP66 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HMG20AQ9NP66 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.09■□□□□ 0.01
HMG20AQ9NP66 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMG20AQ9NP66 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.09■□□□□ 0.01
HMG20AQ9NP66 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
HMG20AQ9NP66 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMG20AQ9NP66 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HMG20AQ9NP66 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMG20AQ9NP66 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HMG20AQ9NP66 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMG20AQ9NP66 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMG20AQ9NP66 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.09■□□□□ 0.01
HMG20AQ9NP66 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms