RNA–Protein interactions for RNA: ENST00000412585.6

HLA-B-249, Transcript of major histocompatibility complex, class I, B, humanhuman

APPRIS P1 BASIC

Gene HLA-B, Length 1,547 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-249ENST00000412585 NISCHQ9Y2I1 1504 aa39.13■■■■□ 3.85
HLA-B-249ENST00000412585 CCDC180Q9P1Z9 1646 aa34.65■■■■□ 3.14
HLA-B-249ENST00000412585 ABCC9O60706 1549 aa33.2■■■□□ 2.91
HLA-B-249ENST00000412585 ZCCHC6Q5VYS8 1495 aaKnown RBP32.75■■■□□ 2.83
HLA-B-249ENST00000412585 DCAF1Q9Y4B6 1507 aa32.43■■■□□ 2.78
HLA-B-249ENST00000412585 DCAF8L2P0C7V8 631 aa32.41■■■□□ 2.78
HLA-B-249ENST00000412585 NACADO15069 1562 aa32.37■■■□□ 2.77
HLA-B-249ENST00000412585 MYO15BQ96JP2 1530 aa32.34■■■□□ 2.77
HLA-B-249ENST00000412585 RB1CC1Q8TDY2 1594 aa32.28■■■□□ 2.76
HLA-B-249ENST00000412585 SCRIBQ14160 1630 aa31.62■■■□□ 2.65
HLA-B-249ENST00000412585 UNC13AQ9UPW8 1703 aa31.61■■■□□ 2.65
HLA-B-249ENST00000412585 SHROOM4Q9ULL8 1493 aa31.25■■■□□ 2.59
HLA-B-249ENST00000412585 BICRAQ9NZM4 1560 aa31.21■■■□□ 2.59
HLA-B-249ENST00000412585 PABPN1Q86U42 306 aaKnown RBP eCLIP31.05■■■□□ 2.56
HLA-B-249ENST00000412585 EIF4G1Q04637 1599 aaKnown RBP30.38■■■□□ 2.45
HLA-B-249ENST00000412585 CECR2Q9BXF3 1484 aa30.36■■■□□ 2.45
HLA-B-249ENST00000412585 BAZ1AQ9NRL2 1556 aaPredicted RBP30.35■■■□□ 2.45
HLA-B-249ENST00000412585 SMARCA4P51532 1647 aa30.29■■■□□ 2.44
HLA-B-249ENST00000412585 MROH2BQ7Z745 1585 aa30.15■■■□□ 2.42
HLA-B-249ENST00000412585 CC2D2AQ9P2K1 1620 aa30.1■■■□□ 2.41
HLA-B-249ENST00000412585 RSF1Q96T23 1441 aaPredicted RBP30■■■□□ 2.39
HLA-B-249ENST00000412585 SMARCA2P51531 1590 aa29.98■■■□□ 2.39
HLA-B-249ENST00000412585 PEG3Q9GZU2 1588 aa29.96■■■□□ 2.39
HLA-B-249ENST00000412585 WIZO95785 1651 aa29.92■■■□□ 2.38
HLA-B-249ENST00000412585 ATAD2BQ9ULI0 1458 aa29.9■■■□□ 2.38
HLA-B-249ENST00000412585 NCAPD3P42695 1498 aa29.78■■■□□ 2.36
HLA-B-249ENST00000412585 HMGXB3Q12766 1538 aa29.78■■■□□ 2.36
HLA-B-249ENST00000412585 DNAJC5BQ9UF47 199 aa29.76■■■□□ 2.36
HLA-B-249ENST00000412585 BAZ1BQ9UIG0 1483 aaKnown RBP29.75■■■□□ 2.35
HLA-B-249ENST00000412585 SUPT5HO00267 1087 aaKnown RBP29.7■■■□□ 2.34
HLA-B-249ENST00000412585 TOP2AP11388 1531 aaKnown RBP29.64■■■□□ 2.34
HLA-B-249ENST00000412585 CCDC88BA6NC98 1476 aa29.21■■■□□ 2.27
HLA-B-249ENST00000412585 LAMC3Q9Y6N6 1575 aa28.99■■■□□ 2.23
HLA-B-249ENST00000412585 PRDM2Q13029 1718 aa28.95■■■□□ 2.23
HLA-B-249ENST00000412585 CADPSQ9ULU8 1353 aa28.95■■■□□ 2.22
HLA-B-249ENST00000412585 CFTRP13569 1480 aa28.92■■■□□ 2.22
HLA-B-249ENST00000412585 NESP48681 1621 aa28.89■■■□□ 2.22
HLA-B-249ENST00000412585 PDS5BQ9NTI5 1447 aa28.73■■■□□ 2.19
HLA-B-249ENST00000412585 KIF21AQ7Z4S6 1674 aa28.69■■■□□ 2.18
HLA-B-249ENST00000412585 FANCD2Q9BXW9 1451 aa28.66■■■□□ 2.18
HLA-B-249ENST00000412585 ERCC6Q03468 1493 aa28.63■■■□□ 2.17
HLA-B-249ENST00000412585 CEP164Q9UPV0 1460 aa28.6■■■□□ 2.17
HLA-B-249ENST00000412585 MRC2Q9UBG0 1479 aa28.42■■■□□ 2.14
HLA-B-249ENST00000412585 THOC2Q8NI27 1593 aaKnown RBP28.41■■■□□ 2.14
HLA-B-249ENST00000412585 ABCC8Q09428 1581 aa28.39■■■□□ 2.13
HLA-B-249ENST00000412585 DNMBPQ6XZF7 1577 aa28.33■■■□□ 2.13
HLA-B-249ENST00000412585 WRNQ14191 1432 aaPredicted RBP eCLIP28.32■■■□□ 2.12
HLA-B-249ENST00000412585 WDR62O43379 1518 aa28.31■■■□□ 2.12
HLA-B-249ENST00000412585 URB2Q14146 1524 aaKnown RBP28.31■■■□□ 2.12
HLA-B-249ENST00000412585 CUX1P39880 1505 aa28.27■■■□□ 2.12
HLA-B-249ENST00000412585 TOPBP1Q92547 1522 aa28.27■■■□□ 2.12
HLA-B-249ENST00000412585 BIVM-ERCC5R4GMW8 1640 aa28.26■■■□□ 2.11
HLA-B-249ENST00000412585 SYNJ1O43426 1573 aa28.24■■■□□ 2.11
HLA-B-249ENST00000412585 TOP2BQ02880 1626 aa28.23■■■□□ 2.11
HLA-B-249ENST00000412585 FGD5Q6ZNL6 1462 aa28.1■■■□□ 2.09
HLA-B-249ENST00000412585 CUX2O14529 1486 aa28.08■■■□□ 2.09
HLA-B-249ENST00000412585 POLA1P09884 1462 aaPredicted RBP28.06■■■□□ 2.08
HLA-B-249ENST00000412585 TRIM41Q8WV44 630 aa28.04■■■□□ 2.08
HLA-B-249ENST00000412585 CHIC1Q5VXU3 224 aa28.02■■■□□ 2.08
HLA-B-249ENST00000412585 IFT140Q96RY7 1462 aa27.95■■■□□ 2.07
HLA-B-249ENST00000412585 SOGA1O94964 1423 aa27.93■■■□□ 2.06
HLA-B-249ENST00000412585 TARBP1Q13395 1621 aaKnown RBP27.93■■■□□ 2.06
HLA-B-249ENST00000412585 WDR97A6NE52 1622 aa27.91■■■□□ 2.06
HLA-B-249ENST00000412585 RAD54L2Q9Y4B4 1467 aa27.9■■■□□ 2.06
HLA-B-249ENST00000412585 ABCA10Q8WWZ4 1543 aa27.85■■■□□ 2.05
HLA-B-249ENST00000412585 EIF4G3O43432 1585 aaKnown RBP27.75■■■□□ 2.03
HLA-B-249ENST00000412585 ABCA5Q8WWZ7 1642 aa27.74■■■□□ 2.03
HLA-B-249ENST00000412585 ZNF608Q9ULD9 1512 aaPredicted RBP27.72■■■□□ 2.03
HLA-B-249ENST00000412585 KIF27Q86VH2 1401 aa27.7■■■□□ 2.02
HLA-B-249ENST00000412585 PBRM1Q86U86 1689 aa27.68■■■□□ 2.02
HLA-B-249ENST00000412585 TDRD9Q8NDG6 1382 aaKnown RBP27.68■■■□□ 2.02
HLA-B-249ENST00000412585 GAPVD1Q14C86 1478 aa27.66■■■□□ 2.02
HLA-B-249ENST00000412585 AQRO60306 1485 aaKnown RBP eCLIP27.63■■■□□ 2.01
HLA-B-249ENST00000412585 EEA1Q15075 1411 aa27.59■■■□□ 2.01
HLA-B-249ENST00000412585 GRIN2BQ13224 1484 aa27.57■■■□□ 2
HLA-B-249ENST00000412585 ERICH3Q5RHP9 1530 aa27.55■■■□□ 2
HLA-B-249ENST00000412585 RUSC2Q8N2Y8 1516 aa27.55■■■□□ 2
HLA-B-249ENST00000412585 CUL7Q14999 1698 aa27.49■■□□□ 1.99
HLA-B-249ENST00000412585 MAGI1Q96QZ7 1491 aaPredicted RBP27.46■■□□□ 1.99
HLA-B-249ENST00000412585 SNAPC4Q5SXM2 1469 aa27.46■■□□□ 1.99
HLA-B-249ENST00000412585 ADAMTS12P58397 1594 aa27.43■■□□□ 1.98
HLA-B-249ENST00000412585 FAM9AQ8IZU1 332 aaPredicted RBP27.42■■□□□ 1.98
HLA-B-249ENST00000412585 IGF1RP08069 1367 aa27.41■■□□□ 1.98
HLA-B-249ENST00000412585 CSRNP3Q8WYN3 585 aa27.36■■□□□ 1.97
HLA-B-249ENST00000412585 FHAD1B1AJZ9 1412 aa27.35■■□□□ 1.97
HLA-B-249ENST00000412585 SYNJ2O15056 1496 aa27.33■■□□□ 1.96
HLA-B-249ENST00000412585 CHD1O14646 1710 aa27.32■■□□□ 1.96
HLA-B-249ENST00000412585 CARMIL1Q5VZK9 1371 aa27.31■■□□□ 1.96
HLA-B-249ENST00000412585 KIF21BO75037 1637 aa27.29■■□□□ 1.96
HLA-B-249ENST00000412585 PRXQ9BXM0 1461 aa27.27■■□□□ 1.96
HLA-B-249ENST00000412585 RAPGEF2Q9Y4G8 1499 aa27.26■■□□□ 1.95
HLA-B-249ENST00000412585 CHMP7Q8WUX9 453 aaPredicted RBP27.23■■□□□ 1.95
HLA-B-249ENST00000412585 GRIN2AQ12879 1464 aa27.22■■□□□ 1.95
HLA-B-249ENST00000412585 FBLN2P98095 1184 aa27.21■■□□□ 1.95
HLA-B-249ENST00000412585 GOLGA3Q08378 1498 aa27.15■■□□□ 1.94
HLA-B-249ENST00000412585 CTTNBP2Q8WZ74 1663 aa27.1■■□□□ 1.93
HLA-B-249ENST00000412585 CEP170Q5SW79 1584 aa27.07■■□□□ 1.92
HLA-B-249ENST00000412585 NUP160Q12769 1436 aa27.05■■□□□ 1.92
HLA-B-249ENST00000412585 EHMT2Q96KQ7 1210 aa27.02■■□□□ 1.92
HLA-B-249ENST00000412585 UBTFP17480 764 aaKnown RBP26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms