RNA–Protein interactions for RNA: ENST00000436368.6

RBFOX1-205, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-205ENST00000436368 NISCHQ9Y2I1 1504 aa33.29■■■□□ 2.92
RBFOX1-205ENST00000436368 CCDC180Q9P1Z9 1646 aa28.69■■■□□ 2.18
RBFOX1-205ENST00000436368 ZCCHC6Q5VYS8 1495 aaKnown RBP28.16■■■□□ 2.1
RBFOX1-205ENST00000436368 SHROOM4Q9ULL8 1493 aa27.67■■■□□ 2.02
RBFOX1-205ENST00000436368 DCAF1Q9Y4B6 1507 aa27.62■■■□□ 2.01
RBFOX1-205ENST00000436368 DCAF8L2P0C7V8 631 aa27.18■■□□□ 1.94
RBFOX1-205ENST00000436368 SUPT5HO00267 1087 aaKnown RBP27.09■■□□□ 1.93
RBFOX1-205ENST00000436368 MYO15BQ96JP2 1530 aa26.99■■□□□ 1.91
RBFOX1-205ENST00000436368 ABCC9O60706 1549 aa26.55■■□□□ 1.84
RBFOX1-205ENST00000436368 NACADO15069 1562 aa26.54■■□□□ 1.84
RBFOX1-205ENST00000436368 SCRIBQ14160 1630 aa26.42■■□□□ 1.82
RBFOX1-205ENST00000436368 CHIC1Q5VXU3 224 aa26.37■■□□□ 1.81
RBFOX1-205ENST00000436368 RSF1Q96T23 1441 aaPredicted RBP26.12■■□□□ 1.77
RBFOX1-205ENST00000436368 RB1CC1Q8TDY2 1594 aa26.12■■□□□ 1.77
RBFOX1-205ENST00000436368 BAZ1AQ9NRL2 1556 aaPredicted RBP25.71■■□□□ 1.71
RBFOX1-205ENST00000436368 CECR2Q9BXF3 1484 aa25.68■■□□□ 1.7
RBFOX1-205ENST00000436368 MROH2BQ7Z745 1585 aa25.68■■□□□ 1.7
RBFOX1-205ENST00000436368 TRIM41Q8WV44 630 aa25.5■■□□□ 1.67
RBFOX1-205ENST00000436368 WIZO95785 1651 aa25.49■■□□□ 1.67
RBFOX1-205ENST00000436368 SMARCA4P51532 1647 aa25.41■■□□□ 1.66
RBFOX1-205ENST00000436368 TOP2AP11388 1531 aaKnown RBP25.39■■□□□ 1.66
RBFOX1-205ENST00000436368 UNC13AQ9UPW8 1703 aa25.36■■□□□ 1.65
RBFOX1-205ENST00000436368 LOC105371045A0A1W2PR82 267 aa25.29■■□□□ 1.64
RBFOX1-205ENST00000436368 EIF4G1Q04637 1599 aaKnown RBP25.22■■□□□ 1.63
RBFOX1-205ENST00000436368 HRCP23327 699 aa25.2■■□□□ 1.62
RBFOX1-205ENST00000436368 PCGF6Q9BYE7 350 aa25.16■■□□□ 1.62
RBFOX1-205ENST00000436368 BICRAQ9NZM4 1560 aa25.14■■□□□ 1.62
RBFOX1-205ENST00000436368 SMARCA2P51531 1590 aa25.1■■□□□ 1.61
RBFOX1-205ENST00000436368 PEG3Q9GZU2 1588 aa25.09■■□□□ 1.61
RBFOX1-205ENST00000436368 CCDC88BA6NC98 1476 aa25.07■■□□□ 1.6
RBFOX1-205ENST00000436368 TRIM26Q12899 539 aaPredicted RBP25.06■■□□□ 1.6
RBFOX1-205ENST00000436368 FAM9AQ8IZU1 332 aaPredicted RBP24.94■■□□□ 1.58
RBFOX1-205ENST00000436368 PABPN1Q86U42 306 aaKnown RBP eCLIP24.9■■□□□ 1.58
RBFOX1-205ENST00000436368 EEA1Q15075 1411 aa24.87■■□□□ 1.57
RBFOX1-205ENST00000436368 ATAD2BQ9ULI0 1458 aa24.78■■□□□ 1.56
RBFOX1-205ENST00000436368 BAZ1BQ9UIG0 1483 aaKnown RBP24.76■■□□□ 1.55
RBFOX1-205ENST00000436368 ABCC8Q09428 1581 aa24.76■■□□□ 1.55
RBFOX1-205ENST00000436368 ZEB1P37275 1124 aaPredicted RBP24.67■■□□□ 1.54
RBFOX1-205ENST00000436368 WRNQ14191 1432 aaPredicted RBP eCLIP24.64■■□□□ 1.54
RBFOX1-205ENST00000436368 TNIKQ9UKE5 1360 aa24.54■■□□□ 1.52
RBFOX1-205ENST00000436368 HMGXB3Q12766 1538 aa24.54■■□□□ 1.52
RBFOX1-205ENST00000436368 CSRNP3Q8WYN3 585 aa24.5■■□□□ 1.51
RBFOX1-205ENST00000436368 GOLGA3Q08378 1498 aa24.49■■□□□ 1.51
RBFOX1-205ENST00000436368 SOGA1O94964 1423 aa24.49■■□□□ 1.51
RBFOX1-205ENST00000436368 EHMT2Q96KQ7 1210 aa24.49■■□□□ 1.51
RBFOX1-205ENST00000436368 CEP162Q5TB80 1403 aa24.45■■□□□ 1.51
RBFOX1-205ENST00000436368 NCAPD3P42695 1498 aa24.45■■□□□ 1.5
RBFOX1-205ENST00000436368 CEP164Q9UPV0 1460 aa24.41■■□□□ 1.5
RBFOX1-205ENST00000436368 SYNJ1O43426 1573 aa24.4■■□□□ 1.5
RBFOX1-205ENST00000436368 KIF21BO75037 1637 aa24.39■■□□□ 1.49
RBFOX1-205ENST00000436368 TOP2BQ02880 1626 aa24.3■■□□□ 1.48
RBFOX1-205ENST00000436368 UBTFP17480 764 aaKnown RBP24.29■■□□□ 1.48
RBFOX1-205ENST00000436368 RUSC2Q8N2Y8 1516 aa24.27■■□□□ 1.48
RBFOX1-205ENST00000436368 PPARGC1BQ86YN6 1023 aaKnown RBP24.26■■□□□ 1.47
RBFOX1-205ENST00000436368 BIVM-ERCC5R4GMW8 1640 aa24.26■■□□□ 1.47
RBFOX1-205ENST00000436368 CFTRP13569 1480 aa24.14■■□□□ 1.45
RBFOX1-205ENST00000436368 ERICH3Q5RHP9 1530 aa24.1■■□□□ 1.45
RBFOX1-205ENST00000436368 CLIP1P30622 1438 aa24.1■■□□□ 1.45
RBFOX1-205ENST00000436368 PRDM2Q13029 1718 aa24.03■■□□□ 1.44
RBFOX1-205ENST00000436368 VPS8Q8N3P4 1428 aa24.01■■□□□ 1.43
RBFOX1-205ENST00000436368 KIF27Q86VH2 1401 aa24■■□□□ 1.43
RBFOX1-205ENST00000436368 CUX1P39880 1505 aa23.99■■□□□ 1.43
RBFOX1-205ENST00000436368 RAPGEF2Q9Y4G8 1499 aa23.99■■□□□ 1.43
RBFOX1-205ENST00000436368 PRXQ9BXM0 1461 aa23.96■■□□□ 1.43
RBFOX1-205ENST00000436368 CCER1Q8TC90 406 aaPredicted RBP23.94■■□□□ 1.42
RBFOX1-205ENST00000436368 APLP2Q06481 763 aa23.93■■□□□ 1.42
RBFOX1-205ENST00000436368 CADPSQ9ULU8 1353 aa23.89■■□□□ 1.42
RBFOX1-205ENST00000436368 CC2D2AQ9P2K1 1620 aa23.79■■□□□ 1.4
RBFOX1-205ENST00000436368 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.78■■□□□ 1.4
RBFOX1-205ENST00000436368 TTBK1Q5TCY1 1321 aaPredicted RBP23.73■■□□□ 1.39
RBFOX1-205ENST00000436368 CUX2O14529 1486 aa23.68■■□□□ 1.38
RBFOX1-205ENST00000436368 ARAP1Q96P48 1450 aa23.67■■□□□ 1.38
RBFOX1-205ENST00000436368 FGD5Q6ZNL6 1462 aa23.63■■□□□ 1.37
RBFOX1-205ENST00000436368 FANCD2Q9BXW9 1451 aa23.63■■□□□ 1.37
RBFOX1-205ENST00000436368 DNMBPQ6XZF7 1577 aa23.6■■□□□ 1.37
RBFOX1-205ENST00000436368 IGF1RP08069 1367 aa23.57■■□□□ 1.36
RBFOX1-205ENST00000436368 CARMIL1Q5VZK9 1371 aa23.52■■□□□ 1.36
RBFOX1-205ENST00000436368 LAMC3Q9Y6N6 1575 aa23.51■■□□□ 1.35
RBFOX1-205ENST00000436368 RANGAP1P46060 587 aaPredicted RBP23.51■■□□□ 1.35
RBFOX1-205ENST00000436368 ARHGAP35Q9NRY4 1499 aa23.51■■□□□ 1.35
RBFOX1-205ENST00000436368 MAP3K1Q13233 1512 aa23.49■■□□□ 1.35
RBFOX1-205ENST00000436368 ABCA10Q8WWZ4 1543 aa23.48■■□□□ 1.35
RBFOX1-205ENST00000436368 HNRNPUL2Q1KMD3 747 aaKnown RBP23.45■■□□□ 1.34
RBFOX1-205ENST00000436368 TOPBP1Q92547 1522 aa23.45■■□□□ 1.34
RBFOX1-205ENST00000436368 CLSPNQ9HAW4 1339 aa23.44■■□□□ 1.34
RBFOX1-205ENST00000436368 CUL7Q14999 1698 aa23.43■■□□□ 1.34
RBFOX1-205ENST00000436368 FHAD1B1AJZ9 1412 aa23.42■■□□□ 1.34
RBFOX1-205ENST00000436368 RRBP1Q9P2E9 1410 aaKnown RBP23.42■■□□□ 1.34
RBFOX1-205ENST00000436368 POLA1P09884 1462 aaPredicted RBP23.39■■□□□ 1.33
RBFOX1-205ENST00000436368 EFCAB5A4FU69 1503 aa23.37■■□□□ 1.33
RBFOX1-205ENST00000436368 PDS5BQ9NTI5 1447 aa23.35■■□□□ 1.33
RBFOX1-205ENST00000436368 TIAM1Q13009 1591 aa23.32■■□□□ 1.32
RBFOX1-205ENST00000436368 CCNB3Q8WWL7 1395 aa23.3■■□□□ 1.32
RBFOX1-205ENST00000436368 DIEXFQ68CQ4 756 aaKnown RBP23.29■■□□□ 1.32
RBFOX1-205ENST00000436368 ZNF316A6NFI3 1004 aaPredicted RBP23.28■■□□□ 1.32
RBFOX1-205ENST00000436368 KANK4Q5T7N3 995 aaPredicted RBP23.27■■□□□ 1.32
RBFOX1-205ENST00000436368 RAD54L2Q9Y4B4 1467 aa23.26■■□□□ 1.31
RBFOX1-205ENST00000436368 NESP48681 1621 aa23.26■■□□□ 1.31
RBFOX1-205ENST00000436368 WDR97A6NE52 1622 aa23.25■■□□□ 1.31
RBFOX1-205ENST00000436368 AQRO60306 1485 aaKnown RBP eCLIP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms