Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC9A3P48764 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC9A3P48764 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
SLC9A3P48764 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC9A3P48764 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC9A3P48764 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.27■□□□□ 0.04
SLC9A3P48764 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC9A3P48764 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC9A3P48764 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC9A3P48764 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.27■□□□□ 0.04
SLC9A3P48764 AC139887.3-201ENST00000568585 713 ntBASIC15.27■□□□□ 0.04
SLC9A3P48764 AL732292.2-201ENST00000609649 430 ntBASIC15.27■□□□□ 0.04
SLC9A3P48764 AL121772.3-201ENST00000610840 674 ntBASIC15.27■□□□□ 0.04
SLC9A3P48764 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC9A3P48764 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SLC9A3P48764 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.27■□□□□ 0.04
SLC9A3P48764 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
SLC9A3P48764 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC9A3P48764 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SLC9A3P48764 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC9A3P48764 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC9A3P48764 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC9A3P48764 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.27■□□□□ 0.03
SLC9A3P48764 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC9A3P48764 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC9A3P48764 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.27■□□□□ 0.03
SLC9A3P48764 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC9A3P48764 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
SLC9A3P48764 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC9A3P48764 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC9A3P48764 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
SLC9A3P48764 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC9A3P48764 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC9A3P48764 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC9A3P48764 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC9A3P48764 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC9A3P48764 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
SLC9A3P48764 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC9A3P48764 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC9A3P48764 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC9A3P48764 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC9A3P48764 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC9A3P48764 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC9A3P48764 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC9A3P48764 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC9A3P48764 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC9A3P48764 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLC9A3P48764 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SLC9A3P48764 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC9A3P48764 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC9A3P48764 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.26■□□□□ 0.03
SLC9A3P48764 MTDHP3-201ENST00000594186 672 ntBASIC15.26■□□□□ 0.03
SLC9A3P48764 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC9A3P48764 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC9A3P48764 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
SLC9A3P48764 AL355877.3-201ENST00000622820 899 ntBASIC15.26■□□□□ 0.03
SLC9A3P48764 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
SLC9A3P48764 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC9A3P48764 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC9A3P48764 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC9A3P48764 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC9A3P48764 AC104640.1-201ENST00000562617 2109 ntBASIC15.26■□□□□ 0.03
SLC9A3P48764 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
SLC9A3P48764 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC9A3P48764 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC9A3P48764 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC9A3P48764 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC9A3P48764 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC9A3P48764 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC9A3P48764 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
SLC9A3P48764 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC9A3P48764 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC9A3P48764 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC9A3P48764 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC9A3P48764 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC9A3P48764 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC9A3P48764 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC9A3P48764 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC9A3P48764 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC9A3P48764 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC9A3P48764 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC9A3P48764 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC9A3P48764 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SLC9A3P48764 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC9A3P48764 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC9A3P48764 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC9A3P48764 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC9A3P48764 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC9A3P48764 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC9A3P48764 PAWRP1-201ENST00000451083 565 ntBASIC15.25■□□□□ 0.03
SLC9A3P48764 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.25■□□□□ 0.03
SLC9A3P48764 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SLC9A3P48764 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC9A3P48764 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC9A3P48764 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC9A3P48764 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC9A3P48764 MIR3652-201ENST00000579335 131 ntBASIC15.25■□□□□ 0.03
SLC9A3P48764 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC9A3P48764 AF228730.7-201ENST00000641842 219 ntBASIC15.25■□□□□ 0.03
SLC9A3P48764 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms