RNA–Protein interactions for RNA: ENST00000575379.1

CHRNB1-207, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,095 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-207ENST00000575379 NISCHQ9Y2I1 1504 aa45.54■■■■■ 4.88
CHRNB1-207ENST00000575379 ABCC9O60706 1549 aa40.98■■■■■ 4.15
CHRNB1-207ENST00000575379 CCDC180Q9P1Z9 1646 aa40.83■■■■■ 4.13
CHRNB1-207ENST00000575379 RB1CC1Q8TDY2 1594 aa38.9■■■■□ 3.82
CHRNB1-207ENST00000575379 NACADO15069 1562 aa38.61■■■■□ 3.77
CHRNB1-207ENST00000575379 DCAF8L2P0C7V8 631 aa38.56■■■■□ 3.76
CHRNB1-207ENST00000575379 DNAJC5BQ9UF47 199 aa38.48■■■■□ 3.75
CHRNB1-207ENST00000575379 PABPN1Q86U42 306 aaKnown RBP eCLIP38.18■■■■□ 3.7
CHRNB1-207ENST00000575379 UNC13AQ9UPW8 1703 aa38.12■■■■□ 3.69
CHRNB1-207ENST00000575379 MYO15BQ96JP2 1530 aa38■■■■□ 3.67
CHRNB1-207ENST00000575379 BICRAQ9NZM4 1560 aa37.83■■■■□ 3.65
CHRNB1-207ENST00000575379 ZCCHC6Q5VYS8 1495 aaKnown RBP37.73■■■■□ 3.63
CHRNB1-207ENST00000575379 DCAF1Q9Y4B6 1507 aa37.54■■■■□ 3.6
CHRNB1-207ENST00000575379 SCRIBQ14160 1630 aa37.32■■■■□ 3.57
CHRNB1-207ENST00000575379 SHROOM4Q9ULL8 1493 aa37.15■■■■□ 3.54
CHRNB1-207ENST00000575379 CC2D2AQ9P2K1 1620 aa36.99■■■■□ 3.51
CHRNB1-207ENST00000575379 EIF4G1Q04637 1599 aaKnown RBP36.88■■■■□ 3.49
CHRNB1-207ENST00000575379 CECR2Q9BXF3 1484 aa36.87■■■■□ 3.49
CHRNB1-207ENST00000575379 NCAPD3P42695 1498 aa35.65■■■■□ 3.3
CHRNB1-207ENST00000575379 ATAD2BQ9ULI0 1458 aa35.57■■■■□ 3.28
CHRNB1-207ENST00000575379 SMARCA4P51532 1647 aa35.55■■■■□ 3.28
CHRNB1-207ENST00000575379 SMARCA2P51531 1590 aa35.44■■■■□ 3.26
CHRNB1-207ENST00000575379 HMGXB3Q12766 1538 aa35.37■■■■□ 3.25
CHRNB1-207ENST00000575379 ERCC6Q03468 1493 aa35.35■■■■□ 3.25
CHRNB1-207ENST00000575379 BAZ1AQ9NRL2 1556 aaPredicted RBP35.33■■■■□ 3.25
CHRNB1-207ENST00000575379 DNAJC5Q9H3Z4 198 aa35.27■■■■□ 3.24
CHRNB1-207ENST00000575379 BAZ1BQ9UIG0 1483 aaKnown RBP35.23■■■■□ 3.23
CHRNB1-207ENST00000575379 CUX2O14529 1486 aa35.22■■■■□ 3.23
CHRNB1-207ENST00000575379 NESP48681 1621 aa35.21■■■■□ 3.23
CHRNB1-207ENST00000575379 MROH2BQ7Z745 1585 aa35.14■■■■□ 3.22
CHRNB1-207ENST00000575379 PEG3Q9GZU2 1588 aa35.14■■■■□ 3.22
CHRNB1-207ENST00000575379 LAMC3Q9Y6N6 1575 aa34.85■■■■□ 3.17
CHRNB1-207ENST00000575379 THOC2Q8NI27 1593 aaKnown RBP34.8■■■■□ 3.16
CHRNB1-207ENST00000575379 KIF21AQ7Z4S6 1674 aa34.75■■■■□ 3.15
CHRNB1-207ENST00000575379 WIZO95785 1651 aa34.74■■■■□ 3.15
CHRNB1-207ENST00000575379 PDS5BQ9NTI5 1447 aa34.64■■■■□ 3.14
CHRNB1-207ENST00000575379 CADPSQ9ULU8 1353 aa34.58■■■■□ 3.13
CHRNB1-207ENST00000575379 MRC2Q9UBG0 1479 aa34.39■■■■□ 3.1
CHRNB1-207ENST00000575379 RSF1Q96T23 1441 aaPredicted RBP34.38■■■■□ 3.09
CHRNB1-207ENST00000575379 WDR62O43379 1518 aa34.3■■■■□ 3.08
CHRNB1-207ENST00000575379 CEP164Q9UPV0 1460 aa34.25■■■■□ 3.07
CHRNB1-207ENST00000575379 TOP2AP11388 1531 aaKnown RBP34.24■■■■□ 3.07
CHRNB1-207ENST00000575379 FANCD2Q9BXW9 1451 aa34.22■■■■□ 3.07
CHRNB1-207ENST00000575379 CFTRP13569 1480 aa34.18■■■■□ 3.06
CHRNB1-207ENST00000575379 URB2Q14146 1524 aaKnown RBP33.96■■■■□ 3.03
CHRNB1-207ENST00000575379 CCDC88BA6NC98 1476 aa33.88■■■■□ 3.01
CHRNB1-207ENST00000575379 PRDM2Q13029 1718 aa33.86■■■■□ 3.01
CHRNB1-207ENST00000575379 TRIM41Q8WV44 630 aa33.82■■■■□ 3
CHRNB1-207ENST00000575379 OSCARQ8IYS5 282 aa33.64■■■□□ 2.98
CHRNB1-207ENST00000575379 TOPBP1Q92547 1522 aa33.58■■■□□ 2.97
CHRNB1-207ENST00000575379 ZNF608Q9ULD9 1512 aaPredicted RBP33.58■■■□□ 2.97
CHRNB1-207ENST00000575379 IFT140Q96RY7 1462 aa33.54■■■□□ 2.96
CHRNB1-207ENST00000575379 DNMBPQ6XZF7 1577 aa33.43■■■□□ 2.94
CHRNB1-207ENST00000575379 ABCC8Q09428 1581 aa33.41■■■□□ 2.94
CHRNB1-207ENST00000575379 EIF4G3O43432 1585 aaKnown RBP33.36■■■□□ 2.93
CHRNB1-207ENST00000575379 TARBP1Q13395 1621 aaKnown RBP33.28■■■□□ 2.92
CHRNB1-207ENST00000575379 RIMBP3CA6NJZ7 1639 aa33.26■■■□□ 2.91
CHRNB1-207ENST00000575379 RIMBP3BA6NNM3 1639 aa33.26■■■□□ 2.91
CHRNB1-207ENST00000575379 RIMBP3Q9UFD9 1639 aa33.26■■■□□ 2.91
CHRNB1-207ENST00000575379 AQRO60306 1485 aaKnown RBP eCLIP33.25■■■□□ 2.91
CHRNB1-207ENST00000575379 POLA1P09884 1462 aaPredicted RBP33.24■■■□□ 2.91
CHRNB1-207ENST00000575379 RAD54L2Q9Y4B4 1467 aa33.16■■■□□ 2.9
CHRNB1-207ENST00000575379 CHD1O14646 1710 aa33.15■■■□□ 2.9
CHRNB1-207ENST00000575379 ARHGEF11O15085 1522 aa33.13■■■□□ 2.89
CHRNB1-207ENST00000575379 SOGA1O94964 1423 aa33.07■■■□□ 2.88
CHRNB1-207ENST00000575379 FBLN2P98095 1184 aa33.06■■■□□ 2.88
CHRNB1-207ENST00000575379 TDRD9Q8NDG6 1382 aaKnown RBP33.06■■■□□ 2.88
CHRNB1-207ENST00000575379 FGD5Q6ZNL6 1462 aa33.04■■■□□ 2.88
CHRNB1-207ENST00000575379 CUX1P39880 1505 aa33.01■■■□□ 2.87
CHRNB1-207ENST00000575379 SUPT5HO00267 1087 aaKnown RBP32.92■■■□□ 2.86
CHRNB1-207ENST00000575379 CYB5RLQ6IPT4 315 aa32.92■■■□□ 2.86
CHRNB1-207ENST00000575379 SNAPC4Q5SXM2 1469 aa32.91■■■□□ 2.86
CHRNB1-207ENST00000575379 WDR97A6NE52 1622 aa32.84■■■□□ 2.85
CHRNB1-207ENST00000575379 ARAP1Q96P48 1450 aa32.81■■■□□ 2.84
CHRNB1-207ENST00000575379 GRIN2BQ13224 1484 aa32.77■■■□□ 2.84
CHRNB1-207ENST00000575379 CHMP7Q8WUX9 453 aaPredicted RBP32.76■■■□□ 2.83
CHRNB1-207ENST00000575379 MAGI1Q96QZ7 1491 aaPredicted RBP32.75■■■□□ 2.83
CHRNB1-207ENST00000575379 CLASP1Q7Z460 1538 aa32.72■■■□□ 2.83
CHRNB1-207ENST00000575379 PBRM1Q86U86 1689 aa32.69■■■□□ 2.82
CHRNB1-207ENST00000575379 SYNJ1O43426 1573 aa32.67■■■□□ 2.82
CHRNB1-207ENST00000575379 SYNJ2O15056 1496 aa32.67■■■□□ 2.82
CHRNB1-207ENST00000575379 GAPVD1Q14C86 1478 aa32.67■■■□□ 2.82
CHRNB1-207ENST00000575379 ABCA10Q8WWZ4 1543 aa32.61■■■□□ 2.81
CHRNB1-207ENST00000575379 ABCA5Q8WWZ7 1642 aa32.59■■■□□ 2.81
CHRNB1-207ENST00000575379 TRHP20396 242 aaPredicted RBP32.57■■■□□ 2.8
CHRNB1-207ENST00000575379 WRNQ14191 1432 aaPredicted RBP eCLIP32.48■■■□□ 2.79
CHRNB1-207ENST00000575379 BIVM-ERCC5R4GMW8 1640 aa32.44■■■□□ 2.78
CHRNB1-207ENST00000575379 TOP2BQ02880 1626 aa32.44■■■□□ 2.78
CHRNB1-207ENST00000575379 GRIN2AQ12879 1464 aa32.36■■■□□ 2.77
CHRNB1-207ENST00000575379 ADAMTS12P58397 1594 aa32.36■■■□□ 2.77
CHRNB1-207ENST00000575379 CEP170Q5SW79 1584 aa32.29■■■□□ 2.76
CHRNB1-207ENST00000575379 ERCC6L2Q5T890 1561 aa32.28■■■□□ 2.76
CHRNB1-207ENST00000575379 NUP160Q12769 1436 aa32.24■■■□□ 2.75
CHRNB1-207ENST00000575379 FHAD1B1AJZ9 1412 aa32.23■■■□□ 2.75
CHRNB1-207ENST00000575379 ERICH3Q5RHP9 1530 aa32.19■■■□□ 2.74
CHRNB1-207ENST00000575379 SHROOM2Q13796 1616 aa32.11■■■□□ 2.73
CHRNB1-207ENST00000575379 PRG4Q92954 1404 aaPredicted RBP31.97■■■□□ 2.71
CHRNB1-207ENST00000575379 JPH4Q96JJ6 628 aa31.93■■■□□ 2.7
CHRNB1-207ENST00000575379 RUSC2Q8N2Y8 1516 aa31.9■■■□□ 2.7
CHRNB1-207ENST00000575379 IGF1RP08069 1367 aa31.81■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms