RNA–Protein interactions for RNA: ENST00000465518.2

RAB42-202, Transcript of RAB42, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB42, Length 857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42-202ENST00000465518 NISCHQ9Y2I1 1504 aa42.69■■■■■ 4.42
RAB42-202ENST00000465518 ABCC9O60706 1549 aa39.25■■■■□ 3.87
RAB42-202ENST00000465518 CCDC180Q9P1Z9 1646 aa38.23■■■■□ 3.71
RAB42-202ENST00000465518 DNAJC5BQ9UF47 199 aa37.7■■■■□ 3.63
RAB42-202ENST00000465518 RB1CC1Q8TDY2 1594 aa36.9■■■■□ 3.5
RAB42-202ENST00000465518 NACADO15069 1562 aa36.36■■■■□ 3.41
RAB42-202ENST00000465518 PABPN1Q86U42 306 aaKnown RBP eCLIP36.33■■■■□ 3.41
RAB42-202ENST00000465518 UNC13AQ9UPW8 1703 aa36.11■■■■□ 3.37
RAB42-202ENST00000465518 DCAF8L2P0C7V8 631 aa35.92■■■■□ 3.34
RAB42-202ENST00000465518 BICRAQ9NZM4 1560 aa35.85■■■■□ 3.33
RAB42-202ENST00000465518 ZCCHC6Q5VYS8 1495 aaKnown RBP35.61■■■■□ 3.29
RAB42-202ENST00000465518 MYO15BQ96JP2 1530 aa35.51■■■■□ 3.27
RAB42-202ENST00000465518 CECR2Q9BXF3 1484 aa35.47■■■■□ 3.27
RAB42-202ENST00000465518 CC2D2AQ9P2K1 1620 aa35.42■■■■□ 3.26
RAB42-202ENST00000465518 DNAJC5Q9H3Z4 198 aa35.41■■■■□ 3.26
RAB42-202ENST00000465518 DCAF1Q9Y4B6 1507 aa35.34■■■■□ 3.25
RAB42-202ENST00000465518 SHROOM4Q9ULL8 1493 aa35.27■■■■□ 3.24
RAB42-202ENST00000465518 EIF4G1Q04637 1599 aaKnown RBP35.08■■■■□ 3.21
RAB42-202ENST00000465518 SCRIBQ14160 1630 aa34.78■■■■□ 3.16
RAB42-202ENST00000465518 CUX2O14529 1486 aa34.27■■■■□ 3.08
RAB42-202ENST00000465518 ERCC6Q03468 1493 aa33.99■■■■□ 3.03
RAB42-202ENST00000465518 NCAPD3P42695 1498 aa33.56■■■□□ 2.96
RAB42-202ENST00000465518 TRIM41Q8WV44 630 aa33.46■■■□□ 2.95
RAB42-202ENST00000465518 NESP48681 1621 aa33.41■■■□□ 2.94
RAB42-202ENST00000465518 THOC2Q8NI27 1593 aaKnown RBP33.32■■■□□ 2.92
RAB42-202ENST00000465518 ATAD2BQ9ULI0 1458 aa33.31■■■□□ 2.92
RAB42-202ENST00000465518 HMGXB3Q12766 1538 aa33.26■■■□□ 2.91
RAB42-202ENST00000465518 SMARCA2P51531 1590 aa33.19■■■□□ 2.9
RAB42-202ENST00000465518 SMARCA4P51532 1647 aa33.18■■■□□ 2.9
RAB42-202ENST00000465518 BAZ1AQ9NRL2 1556 aaPredicted RBP33.12■■■□□ 2.89
RAB42-202ENST00000465518 LAMC3Q9Y6N6 1575 aa33.01■■■□□ 2.88
RAB42-202ENST00000465518 KIF21AQ7Z4S6 1674 aa32.99■■■□□ 2.87
RAB42-202ENST00000465518 BAZ1BQ9UIG0 1483 aaKnown RBP32.97■■■□□ 2.87
RAB42-202ENST00000465518 MROH2BQ7Z745 1585 aa32.91■■■□□ 2.86
RAB42-202ENST00000465518 PEG3Q9GZU2 1588 aa32.86■■■□□ 2.85
RAB42-202ENST00000465518 PDS5BQ9NTI5 1447 aa32.84■■■□□ 2.85
RAB42-202ENST00000465518 MRC2Q9UBG0 1479 aa32.64■■■□□ 2.82
RAB42-202ENST00000465518 WDR62O43379 1518 aa32.61■■■□□ 2.81
RAB42-202ENST00000465518 WIZO95785 1651 aa32.57■■■□□ 2.8
RAB42-202ENST00000465518 CADPSQ9ULU8 1353 aa32.48■■■□□ 2.79
RAB42-202ENST00000465518 OSCARQ8IYS5 282 aa32.48■■■□□ 2.79
RAB42-202ENST00000465518 RSF1Q96T23 1441 aaPredicted RBP32.48■■■□□ 2.79
RAB42-202ENST00000465518 CEP164Q9UPV0 1460 aa32.3■■■□□ 2.76
RAB42-202ENST00000465518 RIMBP3CA6NJZ7 1639 aa32.25■■■□□ 2.75
RAB42-202ENST00000465518 RIMBP3BA6NNM3 1639 aa32.25■■■□□ 2.75
RAB42-202ENST00000465518 RIMBP3Q9UFD9 1639 aa32.25■■■□□ 2.75
RAB42-202ENST00000465518 TOP2AP11388 1531 aaKnown RBP32.25■■■□□ 2.75
RAB42-202ENST00000465518 FANCD2Q9BXW9 1451 aa32.16■■■□□ 2.74
RAB42-202ENST00000465518 ARHGEF11O15085 1522 aa32.03■■■□□ 2.72
RAB42-202ENST00000465518 URB2Q14146 1524 aaKnown RBP31.95■■■□□ 2.71
RAB42-202ENST00000465518 CFTRP13569 1480 aa31.91■■■□□ 2.7
RAB42-202ENST00000465518 TRHP20396 242 aaPredicted RBP31.82■■■□□ 2.68
RAB42-202ENST00000465518 CYB5RLQ6IPT4 315 aa31.8■■■□□ 2.68
RAB42-202ENST00000465518 CCDC88BA6NC98 1476 aa31.79■■■□□ 2.68
RAB42-202ENST00000465518 ZNF608Q9ULD9 1512 aaPredicted RBP31.75■■■□□ 2.67
RAB42-202ENST00000465518 AEBP2Q6ZN18 517 aaPredicted RBP31.69■■■□□ 2.66
RAB42-202ENST00000465518 IFT140Q96RY7 1462 aa31.68■■■□□ 2.66
RAB42-202ENST00000465518 PRDM2Q13029 1718 aa31.66■■■□□ 2.66
RAB42-202ENST00000465518 ARAP1Q96P48 1450 aa31.63■■■□□ 2.65
RAB42-202ENST00000465518 EIF4G3O43432 1585 aaKnown RBP31.56■■■□□ 2.64
RAB42-202ENST00000465518 CHD1O14646 1710 aa31.54■■■□□ 2.64
RAB42-202ENST00000465518 SUPT5HO00267 1087 aaKnown RBP31.53■■■□□ 2.64
RAB42-202ENST00000465518 TOPBP1Q92547 1522 aa31.43■■■□□ 2.62
RAB42-202ENST00000465518 FBLN2P98095 1184 aa31.31■■■□□ 2.6
RAB42-202ENST00000465518 AQRO60306 1485 aaKnown RBP eCLIP31.3■■■□□ 2.65e-11■■■■■ 56.6
RAB42-202ENST00000465518 ABCC8Q09428 1581 aa31.26■■■□□ 2.6
RAB42-202ENST00000465518 TARBP1Q13395 1621 aaKnown RBP31.24■■■□□ 2.59
RAB42-202ENST00000465518 DNMBPQ6XZF7 1577 aa31.23■■■□□ 2.59
RAB42-202ENST00000465518 CLASP1Q7Z460 1538 aa31.11■■■□□ 2.57
RAB42-202ENST00000465518 POLA1P09884 1462 aaPredicted RBP31.04■■■□□ 2.56
RAB42-202ENST00000465518 SYNJ1O43426 1573 aa31■■■□□ 2.55
RAB42-202ENST00000465518 SNAPC4Q5SXM2 1469 aa30.98■■■□□ 2.55
RAB42-202ENST00000465518 RAD54L2Q9Y4B4 1467 aa30.94■■■□□ 2.54
RAB42-202ENST00000465518 TDRD9Q8NDG6 1382 aaKnown RBP30.93■■■□□ 2.54
RAB42-202ENST00000465518 CHMP7Q8WUX9 453 aaPredicted RBP30.89■■■□□ 2.54
RAB42-202ENST00000465518 CUX1P39880 1505 aa30.88■■■□□ 2.53
RAB42-202ENST00000465518 WDR97A6NE52 1622 aa30.85■■■□□ 2.53
RAB42-202ENST00000465518 GAPVD1Q14C86 1478 aa30.85■■■□□ 2.53
RAB42-202ENST00000465518 MAGI1Q96QZ7 1491 aaPredicted RBP30.84■■■□□ 2.53
RAB42-202ENST00000465518 SOGA1O94964 1423 aa30.84■■■□□ 2.53
RAB42-202ENST00000465518 FGD5Q6ZNL6 1462 aa30.78■■■□□ 2.52
RAB42-202ENST00000465518 SYNJ2O15056 1496 aa30.76■■■□□ 2.51
RAB42-202ENST00000465518 GRIN2BQ13224 1484 aa30.72■■■□□ 2.51
RAB42-202ENST00000465518 BIVM-ERCC5R4GMW8 1640 aa30.65■■■□□ 2.5
RAB42-202ENST00000465518 WRNQ14191 1432 aaPredicted RBP eCLIP30.64■■■□□ 2.5
RAB42-202ENST00000465518 TOP2BQ02880 1626 aa30.62■■■□□ 2.49
RAB42-202ENST00000465518 PBRM1Q86U86 1689 aa30.59■■■□□ 2.49
RAB42-202ENST00000465518 ERCC6L2Q5T890 1561 aa30.54■■■□□ 2.48
RAB42-202ENST00000465518 KIF13AQ9H1H9 1805 aa30.52■■■□□ 2.48
RAB42-202ENST00000465518 ABCA10Q8WWZ4 1543 aa30.48■■■□□ 2.47
RAB42-202ENST00000465518 ILDR1Q86SU0 546 aaPredicted RBP30.44■■■□□ 2.46
RAB42-202ENST00000465518 ABCA5Q8WWZ7 1642 aa30.43■■■□□ 2.46
RAB42-202ENST00000465518 CEP170Q5SW79 1584 aa30.4■■■□□ 2.46
RAB42-202ENST00000465518 GRIN2AQ12879 1464 aa30.34■■■□□ 2.45
RAB42-202ENST00000465518 SHROOM2Q13796 1616 aa30.28■■■□□ 2.44
RAB42-202ENST00000465518 NUP160Q12769 1436 aa30.26■■■□□ 2.43
RAB42-202ENST00000465518 KDM4FA0A1W2PPD8 638 aa30.22■■■□□ 2.43
RAB42-202ENST00000465518 ADAMTS12P58397 1594 aa30.22■■■□□ 2.43
RAB42-202ENST00000465518 FAM69CQ0P6D2 419 aa30.16■■■□□ 2.42
RAB42-202ENST00000465518 ABCC10Q5T3U5 1492 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms