RNA–Protein interactions for RNA: ENST00000543753.5

KRTCAP3-207, Transcript of keratinocyte associated protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene KRTCAP3, Length 956 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3-207ENST00000543753 NISCHQ9Y2I1 1504 aa46.23■■■■■ 4.99
KRTCAP3-207ENST00000543753 ABCC9O60706 1549 aa41.74■■■■■ 4.27
KRTCAP3-207ENST00000543753 CCDC180Q9P1Z9 1646 aa41.55■■■■■ 4.24
KRTCAP3-207ENST00000543753 RB1CC1Q8TDY2 1594 aa39.61■■■■□ 3.93
KRTCAP3-207ENST00000543753 DNAJC5BQ9UF47 199 aa39.31■■■■□ 3.88
KRTCAP3-207ENST00000543753 NACADO15069 1562 aa39.29■■■■□ 3.88
KRTCAP3-207ENST00000543753 DCAF8L2P0C7V8 631 aa39.04■■■■□ 3.84
KRTCAP3-207ENST00000543753 PABPN1Q86U42 306 aaKnown RBP eCLIP38.82■■■■□ 3.8
KRTCAP3-207ENST00000543753 UNC13AQ9UPW8 1703 aa38.77■■■■□ 3.8
KRTCAP3-207ENST00000543753 MYO15BQ96JP2 1530 aa38.68■■■■□ 3.78
KRTCAP3-207ENST00000543753 BICRAQ9NZM4 1560 aa38.53■■■■□ 3.76
KRTCAP3-207ENST00000543753 ZCCHC6Q5VYS8 1495 aaKnown RBP38.3■■■■□ 3.72
KRTCAP3-207ENST00000543753 DCAF1Q9Y4B6 1507 aa38.15■■■■□ 3.7
KRTCAP3-207ENST00000543753 SCRIBQ14160 1630 aa37.9■■■■□ 3.66
KRTCAP3-207ENST00000543753 SHROOM4Q9ULL8 1493 aa37.9■■■■□ 3.66
KRTCAP3-207ENST00000543753 CC2D2AQ9P2K1 1620 aa37.69■■■■□ 3.62
KRTCAP3-207ENST00000543753 CECR2Q9BXF3 1484 aa37.59■■■■□ 3.61
KRTCAP3-207ENST00000543753 EIF4G1Q04637 1599 aaKnown RBP37.56■■■■□ 3.6
KRTCAP3-207ENST00000543753 NCAPD3P42695 1498 aa36.29■■■■□ 3.4
KRTCAP3-207ENST00000543753 DNAJC5Q9H3Z4 198 aa36.18■■■■□ 3.38
KRTCAP3-207ENST00000543753 ATAD2BQ9ULI0 1458 aa36.18■■■■□ 3.38
KRTCAP3-207ENST00000543753 SMARCA4P51532 1647 aa36.12■■■■□ 3.37
KRTCAP3-207ENST00000543753 SMARCA2P51531 1590 aa36.04■■■■□ 3.36
KRTCAP3-207ENST00000543753 HMGXB3Q12766 1538 aa36.02■■■■□ 3.36
KRTCAP3-207ENST00000543753 ERCC6Q03468 1493 aa36.01■■■■□ 3.36
KRTCAP3-207ENST00000543753 CUX2O14529 1486 aa35.99■■■■□ 3.35
KRTCAP3-207ENST00000543753 BAZ1AQ9NRL2 1556 aaPredicted RBP35.88■■■■□ 3.33
KRTCAP3-207ENST00000543753 NESP48681 1621 aa35.83■■■■□ 3.33
KRTCAP3-207ENST00000543753 BAZ1BQ9UIG0 1483 aaKnown RBP35.81■■■■□ 3.32
KRTCAP3-207ENST00000543753 PEG3Q9GZU2 1588 aa35.75■■■■□ 3.31
KRTCAP3-207ENST00000543753 MROH2BQ7Z745 1585 aa35.66■■■■□ 3.3
KRTCAP3-207ENST00000543753 THOC2Q8NI27 1593 aaKnown RBP35.5■■■■□ 3.27
KRTCAP3-207ENST00000543753 LAMC3Q9Y6N6 1575 aa35.48■■■■□ 3.27
KRTCAP3-207ENST00000543753 KIF21AQ7Z4S6 1674 aa35.36■■■■□ 3.25
KRTCAP3-207ENST00000543753 PDS5BQ9NTI5 1447 aa35.26■■■■□ 3.24
KRTCAP3-207ENST00000543753 WIZO95785 1651 aa35.22■■■■□ 3.23
KRTCAP3-207ENST00000543753 CADPSQ9ULU8 1353 aa35.16■■■■□ 3.22
KRTCAP3-207ENST00000543753 MRC2Q9UBG0 1479 aa35.03■■■■□ 3.2
KRTCAP3-207ENST00000543753 WDR62O43379 1518 aa34.95■■■■□ 3.19
KRTCAP3-207ENST00000543753 CEP164Q9UPV0 1460 aa34.84■■■■□ 3.17
KRTCAP3-207ENST00000543753 RSF1Q96T23 1441 aaPredicted RBP34.83■■■■□ 3.17
KRTCAP3-207ENST00000543753 FANCD2Q9BXW9 1451 aa34.8■■■■□ 3.16
KRTCAP3-207ENST00000543753 CFTRP13569 1480 aa34.75■■■■□ 3.15
KRTCAP3-207ENST00000543753 TOP2AP11388 1531 aaKnown RBP34.75■■■■□ 3.15
KRTCAP3-207ENST00000543753 URB2Q14146 1524 aaKnown RBP34.55■■■■□ 3.12
KRTCAP3-207ENST00000543753 TRIM41Q8WV44 630 aa34.52■■■■□ 3.12
KRTCAP3-207ENST00000543753 PRDM2Q13029 1718 aa34.41■■■■□ 3.1
KRTCAP3-207ENST00000543753 CCDC88BA6NC98 1476 aa34.36■■■■□ 3.09
KRTCAP3-207ENST00000543753 OSCARQ8IYS5 282 aa34.28■■■■□ 3.08
KRTCAP3-207ENST00000543753 ZNF608Q9ULD9 1512 aaPredicted RBP34.16■■■■□ 3.06
KRTCAP3-207ENST00000543753 TOPBP1Q92547 1522 aa34.14■■■■□ 3.06
KRTCAP3-207ENST00000543753 IFT140Q96RY7 1462 aa34.14■■■■□ 3.06
KRTCAP3-207ENST00000543753 DNMBPQ6XZF7 1577 aa33.98■■■■□ 3.03
KRTCAP3-207ENST00000543753 ABCC8Q09428 1581 aa33.97■■■■□ 3.03
KRTCAP3-207ENST00000543753 EIF4G3O43432 1585 aaKnown RBP33.96■■■■□ 3.03
KRTCAP3-207ENST00000543753 RIMBP3CA6NJZ7 1639 aa33.94■■■■□ 3.02
KRTCAP3-207ENST00000543753 RIMBP3BA6NNM3 1639 aa33.94■■■■□ 3.02
KRTCAP3-207ENST00000543753 RIMBP3Q9UFD9 1639 aa33.94■■■■□ 3.02
KRTCAP3-207ENST00000543753 TARBP1Q13395 1621 aaKnown RBP33.86■■■■□ 3.01
KRTCAP3-207ENST00000543753 ARHGEF11O15085 1522 aa33.81■■■■□ 3
KRTCAP3-207ENST00000543753 AQRO60306 1485 aaKnown RBP eCLIP33.81■■■■□ 3
KRTCAP3-207ENST00000543753 POLA1P09884 1462 aaPredicted RBP33.78■■■■□ 3
KRTCAP3-207ENST00000543753 CHD1O14646 1710 aa33.74■■■□□ 2.99
KRTCAP3-207ENST00000543753 RAD54L2Q9Y4B4 1467 aa33.67■■■□□ 2.98
KRTCAP3-207ENST00000543753 SOGA1O94964 1423 aa33.59■■■□□ 2.97
KRTCAP3-207ENST00000543753 FBLN2P98095 1184 aa33.57■■■□□ 2.96
KRTCAP3-207ENST00000543753 TDRD9Q8NDG6 1382 aaKnown RBP33.57■■■□□ 2.96
KRTCAP3-207ENST00000543753 FGD5Q6ZNL6 1462 aa33.55■■■□□ 2.96
KRTCAP3-207ENST00000543753 CYB5RLQ6IPT4 315 aa33.53■■■□□ 2.96
KRTCAP3-207ENST00000543753 CUX1P39880 1505 aa33.51■■■□□ 2.95
KRTCAP3-207ENST00000543753 ARAP1Q96P48 1450 aa33.49■■■□□ 2.95
KRTCAP3-207ENST00000543753 SNAPC4Q5SXM2 1469 aa33.46■■■□□ 2.95
KRTCAP3-207ENST00000543753 WDR97A6NE52 1622 aa33.43■■■□□ 2.94
KRTCAP3-207ENST00000543753 CLASP1Q7Z460 1538 aa33.34■■■□□ 2.93
KRTCAP3-207ENST00000543753 MAGI1Q96QZ7 1491 aaPredicted RBP33.33■■■□□ 2.93
KRTCAP3-207ENST00000543753 GRIN2BQ13224 1484 aa33.32■■■□□ 2.92
KRTCAP3-207ENST00000543753 CHMP7Q8WUX9 453 aaPredicted RBP33.27■■■□□ 2.92
KRTCAP3-207ENST00000543753 SYNJ1O43426 1573 aa33.26■■■□□ 2.92
KRTCAP3-207ENST00000543753 SYNJ2O15056 1496 aa33.24■■■□□ 2.91
KRTCAP3-207ENST00000543753 PBRM1Q86U86 1689 aa33.21■■■□□ 2.91
KRTCAP3-207ENST00000543753 GAPVD1Q14C86 1478 aa33.18■■■□□ 2.9
KRTCAP3-207ENST00000543753 TRHP20396 242 aaPredicted RBP33.18■■■□□ 2.9
KRTCAP3-207ENST00000543753 SUPT5HO00267 1087 aaKnown RBP33.15■■■□□ 2.9
KRTCAP3-207ENST00000543753 ABCA5Q8WWZ7 1642 aa33.13■■■□□ 2.89
KRTCAP3-207ENST00000543753 ABCA10Q8WWZ4 1543 aa33.13■■■□□ 2.89
KRTCAP3-207ENST00000543753 WRNQ14191 1432 aaPredicted RBP eCLIP32.94■■■□□ 2.86
KRTCAP3-207ENST00000543753 BIVM-ERCC5R4GMW8 1640 aa32.91■■■□□ 2.86
KRTCAP3-207ENST00000543753 GRIN2AQ12879 1464 aa32.91■■■□□ 2.86
KRTCAP3-207ENST00000543753 ADAMTS12P58397 1594 aa32.9■■■□□ 2.86
KRTCAP3-207ENST00000543753 TOP2BQ02880 1626 aa32.9■■■□□ 2.86
KRTCAP3-207ENST00000543753 ERCC6L2Q5T890 1561 aa32.86■■■□□ 2.85
KRTCAP3-207ENST00000543753 CEP170Q5SW79 1584 aa32.83■■■□□ 2.85
KRTCAP3-207ENST00000543753 NUP160Q12769 1436 aa32.8■■■□□ 2.84
KRTCAP3-207ENST00000543753 FHAD1B1AJZ9 1412 aa32.75■■■□□ 2.83
KRTCAP3-207ENST00000543753 ERICH3Q5RHP9 1530 aa32.7■■■□□ 2.83
KRTCAP3-207ENST00000543753 SHROOM2Q13796 1616 aa32.69■■■□□ 2.82
KRTCAP3-207ENST00000543753 PRG4Q92954 1404 aaPredicted RBP32.5■■■□□ 2.79
KRTCAP3-207ENST00000543753 RUSC2Q8N2Y8 1516 aa32.45■■■□□ 2.78
KRTCAP3-207ENST00000543753 JPH4Q96JJ6 628 aa32.41■■■□□ 2.78
KRTCAP3-207ENST00000543753 KIF13AQ9H1H9 1805 aa32.34■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms