RNA–Protein interactions for RNA: ENST00000287773.5

TMEM171-201, Transcript of transmembrane protein 171, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TMEM171, Length 1,247 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM171-201ENST00000287773 NISCHQ9Y2I1 1504 aa46.14■■■■■ 4.98
TMEM171-201ENST00000287773 ABCC9O60706 1549 aa41.67■■■■■ 4.26
TMEM171-201ENST00000287773 CCDC180Q9P1Z9 1646 aa41.5■■■■■ 4.23
TMEM171-201ENST00000287773 RB1CC1Q8TDY2 1594 aa39.51■■■■□ 3.92
TMEM171-201ENST00000287773 DNAJC5BQ9UF47 199 aa39.19■■■■□ 3.86
TMEM171-201ENST00000287773 NACADO15069 1562 aa39.18■■■■□ 3.86
TMEM171-201ENST00000287773 DCAF8L2P0C7V8 631 aa38.97■■■■□ 3.83
TMEM171-201ENST00000287773 UNC13AQ9UPW8 1703 aa38.87■■■■□ 3.81
TMEM171-201ENST00000287773 PABPN1Q86U42 306 aaKnown RBP eCLIP38.74■■■■□ 3.79
TMEM171-201ENST00000287773 MYO15BQ96JP2 1530 aa38.53■■■■□ 3.76
TMEM171-201ENST00000287773 BICRAQ9NZM4 1560 aa38.48■■■■□ 3.75
TMEM171-201ENST00000287773 ZCCHC6Q5VYS8 1495 aaKnown RBP38.24■■■■□ 3.71
TMEM171-201ENST00000287773 DCAF1Q9Y4B6 1507 aa38.02■■■■□ 3.68
TMEM171-201ENST00000287773 SCRIBQ14160 1630 aa37.91■■■■□ 3.66
TMEM171-201ENST00000287773 SHROOM4Q9ULL8 1493 aa37.72■■■■□ 3.63
TMEM171-201ENST00000287773 CC2D2AQ9P2K1 1620 aa37.65■■■■□ 3.62
TMEM171-201ENST00000287773 EIF4G1Q04637 1599 aaKnown RBP37.5■■■■□ 3.59
TMEM171-201ENST00000287773 CECR2Q9BXF3 1484 aa37.48■■■■□ 3.59
TMEM171-201ENST00000287773 NCAPD3P42695 1498 aa36.14■■■■□ 3.38
TMEM171-201ENST00000287773 SMARCA4P51532 1647 aa36.09■■■■□ 3.37
TMEM171-201ENST00000287773 ATAD2BQ9ULI0 1458 aa36.09■■■■□ 3.37
TMEM171-201ENST00000287773 SMARCA2P51531 1590 aa35.94■■■■□ 3.34
TMEM171-201ENST00000287773 DNAJC5Q9H3Z4 198 aa35.94■■■■□ 3.34
TMEM171-201ENST00000287773 HMGXB3Q12766 1538 aa35.93■■■■□ 3.34
TMEM171-201ENST00000287773 ERCC6Q03468 1493 aa35.91■■■■□ 3.34
TMEM171-201ENST00000287773 CUX2O14529 1486 aa35.84■■■■□ 3.33
TMEM171-201ENST00000287773 BAZ1AQ9NRL2 1556 aaPredicted RBP35.81■■■■□ 3.32
TMEM171-201ENST00000287773 NESP48681 1621 aa35.8■■■■□ 3.32
TMEM171-201ENST00000287773 BAZ1BQ9UIG0 1483 aaKnown RBP35.73■■■■□ 3.31
TMEM171-201ENST00000287773 PEG3Q9GZU2 1588 aa35.67■■■■□ 3.3
TMEM171-201ENST00000287773 MROH2BQ7Z745 1585 aa35.63■■■■□ 3.29
TMEM171-201ENST00000287773 THOC2Q8NI27 1593 aaKnown RBP35.47■■■■□ 3.27
TMEM171-201ENST00000287773 KIF21AQ7Z4S6 1674 aa35.4■■■■□ 3.26
TMEM171-201ENST00000287773 LAMC3Q9Y6N6 1575 aa35.4■■■■□ 3.26
TMEM171-201ENST00000287773 WIZO95785 1651 aa35.26■■■■□ 3.23
TMEM171-201ENST00000287773 PDS5BQ9NTI5 1447 aa35.12■■■■□ 3.21
TMEM171-201ENST00000287773 CADPSQ9ULU8 1353 aa35.04■■■■□ 3.2
TMEM171-201ENST00000287773 MRC2Q9UBG0 1479 aa34.92■■■■□ 3.18
TMEM171-201ENST00000287773 WDR62O43379 1518 aa34.87■■■■□ 3.17
TMEM171-201ENST00000287773 RSF1Q96T23 1441 aaPredicted RBP34.76■■■■□ 3.16
TMEM171-201ENST00000287773 CEP164Q9UPV0 1460 aa34.76■■■■□ 3.15
TMEM171-201ENST00000287773 FANCD2Q9BXW9 1451 aa34.71■■■■□ 3.15
TMEM171-201ENST00000287773 TOP2AP11388 1531 aaKnown RBP34.71■■■■□ 3.15
TMEM171-201ENST00000287773 CFTRP13569 1480 aa34.65■■■■□ 3.14
TMEM171-201ENST00000287773 URB2Q14146 1524 aaKnown RBP34.5■■■■□ 3.11
TMEM171-201ENST00000287773 PRDM2Q13029 1718 aa34.48■■■■□ 3.11
TMEM171-201ENST00000287773 TRIM41Q8WV44 630 aa34.41■■■■□ 3.1
TMEM171-201ENST00000287773 CCDC88BA6NC98 1476 aa34.3■■■■□ 3.08
TMEM171-201ENST00000287773 ZNF608Q9ULD9 1512 aaPredicted RBP34.11■■■■□ 3.05
TMEM171-201ENST00000287773 OSCARQ8IYS5 282 aa34.11■■■■□ 3.05
TMEM171-201ENST00000287773 TOPBP1Q92547 1522 aa34.07■■■■□ 3.04
TMEM171-201ENST00000287773 IFT140Q96RY7 1462 aa34.03■■■■□ 3.04
TMEM171-201ENST00000287773 EIF4G3O43432 1585 aaKnown RBP33.94■■■■□ 3.02
TMEM171-201ENST00000287773 DNMBPQ6XZF7 1577 aa33.94■■■■□ 3.02
TMEM171-201ENST00000287773 RIMBP3CA6NJZ7 1639 aa33.91■■■■□ 3.02
TMEM171-201ENST00000287773 RIMBP3BA6NNM3 1639 aa33.91■■■■□ 3.02
TMEM171-201ENST00000287773 RIMBP3Q9UFD9 1639 aa33.91■■■■□ 3.02
TMEM171-201ENST00000287773 ABCC8Q09428 1581 aa33.82■■■■□ 3
TMEM171-201ENST00000287773 TARBP1Q13395 1621 aaKnown RBP33.82■■■■□ 3
TMEM171-201ENST00000287773 CHD1O14646 1710 aa33.79■■■■□ 3
TMEM171-201ENST00000287773 AQRO60306 1485 aaKnown RBP eCLIP33.74■■■□□ 2.99
TMEM171-201ENST00000287773 ARHGEF11O15085 1522 aa33.73■■■□□ 2.99
TMEM171-201ENST00000287773 POLA1P09884 1462 aaPredicted RBP33.71■■■□□ 2.99
TMEM171-201ENST00000287773 RAD54L2Q9Y4B4 1467 aa33.63■■■□□ 2.97
TMEM171-201ENST00000287773 FGD5Q6ZNL6 1462 aa33.5■■■□□ 2.95
TMEM171-201ENST00000287773 TDRD9Q8NDG6 1382 aaKnown RBP33.49■■■□□ 2.95
TMEM171-201ENST00000287773 SOGA1O94964 1423 aa33.49■■■□□ 2.95
TMEM171-201ENST00000287773 CUX1P39880 1505 aa33.48■■■□□ 2.95
TMEM171-201ENST00000287773 FBLN2P98095 1184 aa33.48■■■□□ 2.95
TMEM171-201ENST00000287773 ARAP1Q96P48 1450 aa33.42■■■□□ 2.94
TMEM171-201ENST00000287773 CYB5RLQ6IPT4 315 aa33.41■■■□□ 2.94
TMEM171-201ENST00000287773 SNAPC4Q5SXM2 1469 aa33.41■■■□□ 2.94
TMEM171-201ENST00000287773 WDR97A6NE52 1622 aa33.36■■■□□ 2.93
TMEM171-201ENST00000287773 CLASP1Q7Z460 1538 aa33.28■■■□□ 2.92
TMEM171-201ENST00000287773 PBRM1Q86U86 1689 aa33.26■■■□□ 2.92
TMEM171-201ENST00000287773 MAGI1Q96QZ7 1491 aaPredicted RBP33.23■■■□□ 2.91
TMEM171-201ENST00000287773 GRIN2BQ13224 1484 aa33.22■■■□□ 2.91
TMEM171-201ENST00000287773 SYNJ1O43426 1573 aa33.19■■■□□ 2.9
TMEM171-201ENST00000287773 SUPT5HO00267 1087 aaKnown RBP33.15■■■□□ 2.9
TMEM171-201ENST00000287773 CHMP7Q8WUX9 453 aaPredicted RBP33.15■■■□□ 2.9
TMEM171-201ENST00000287773 SYNJ2O15056 1496 aa33.13■■■□□ 2.89
TMEM171-201ENST00000287773 ABCA5Q8WWZ7 1642 aa33.11■■■□□ 2.89
TMEM171-201ENST00000287773 GAPVD1Q14C86 1478 aa33.11■■■□□ 2.89
TMEM171-201ENST00000287773 TRHP20396 242 aaPredicted RBP33.07■■■□□ 2.88
TMEM171-201ENST00000287773 ABCA10Q8WWZ4 1543 aa33.06■■■□□ 2.88
TMEM171-201ENST00000287773 BIVM-ERCC5R4GMW8 1640 aa32.91■■■□□ 2.86
TMEM171-201ENST00000287773 TOP2BQ02880 1626 aa32.88■■■□□ 2.85
TMEM171-201ENST00000287773 ADAMTS12P58397 1594 aa32.87■■■□□ 2.85
TMEM171-201ENST00000287773 ERCC6L2Q5T890 1561 aa32.85■■■□□ 2.85
TMEM171-201ENST00000287773 WRNQ14191 1432 aaPredicted RBP eCLIP32.84■■■□□ 2.85
TMEM171-201ENST00000287773 GRIN2AQ12879 1464 aa32.83■■■□□ 2.85
TMEM171-201ENST00000287773 CEP170Q5SW79 1584 aa32.81■■■□□ 2.84
TMEM171-201ENST00000287773 NUP160Q12769 1436 aa32.71■■■□□ 2.83
TMEM171-201ENST00000287773 SHROOM2Q13796 1616 aa32.66■■■□□ 2.82
TMEM171-201ENST00000287773 FHAD1B1AJZ9 1412 aa32.64■■■□□ 2.82
TMEM171-201ENST00000287773 ERICH3Q5RHP9 1530 aa32.62■■■□□ 2.81
TMEM171-201ENST00000287773 RUSC2Q8N2Y8 1516 aa32.42■■■□□ 2.78
TMEM171-201ENST00000287773 PRG4Q92954 1404 aaPredicted RBP32.41■■■□□ 2.78
TMEM171-201ENST00000287773 KIF13AQ9H1H9 1805 aa32.37■■■□□ 2.77
TMEM171-201ENST00000287773 JPH4Q96JJ6 628 aa32.3■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms