RNA–Protein interactions for RNA: ENST00000539170.5

GABARAPL1-205, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 3 BASIC

Gene GABARAPL1, Length 1,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-205ENST00000539170 NISCHQ9Y2I1 1504 aa37.81■■■■□ 3.64
GABARAPL1-205ENST00000539170 CCDC180Q9P1Z9 1646 aa33■■■□□ 2.87
GABARAPL1-205ENST00000539170 ZCCHC6Q5VYS8 1495 aaKnown RBP31.82■■■□□ 2.68
GABARAPL1-205ENST00000539170 DCAF1Q9Y4B6 1507 aa31.33■■■□□ 2.61
GABARAPL1-205ENST00000539170 DCAF8L2P0C7V8 631 aa30.98■■■□□ 2.55
GABARAPL1-205ENST00000539170 ABCC9O60706 1549 aa30.97■■■□□ 2.55
GABARAPL1-205ENST00000539170 MYO15BQ96JP2 1530 aa30.93■■■□□ 2.54
GABARAPL1-205ENST00000539170 SHROOM4Q9ULL8 1493 aa30.78■■■□□ 2.52
GABARAPL1-205ENST00000539170 NACADO15069 1562 aa30.67■■■□□ 2.5
GABARAPL1-205ENST00000539170 RB1CC1Q8TDY2 1594 aa30.37■■■□□ 2.45
GABARAPL1-205ENST00000539170 SCRIBQ14160 1630 aa30.27■■■□□ 2.44
GABARAPL1-205ENST00000539170 UNC13AQ9UPW8 1703 aa29.8■■■□□ 2.36
GABARAPL1-205ENST00000539170 SUPT5HO00267 1087 aaKnown RBP29.63■■■□□ 2.33
GABARAPL1-205ENST00000539170 BICRAQ9NZM4 1560 aa29.47■■■□□ 2.31
GABARAPL1-205ENST00000539170 RSF1Q96T23 1441 aaPredicted RBP29.34■■■□□ 2.29
GABARAPL1-205ENST00000539170 CECR2Q9BXF3 1484 aa29.33■■■□□ 2.29
GABARAPL1-205ENST00000539170 BAZ1AQ9NRL2 1556 aaPredicted RBP29.2■■■□□ 2.26
GABARAPL1-205ENST00000539170 MROH2BQ7Z745 1585 aa29.19■■■□□ 2.26
GABARAPL1-205ENST00000539170 PABPN1Q86U42 306 aaKnown RBP eCLIP29.17■■■□□ 2.26
GABARAPL1-205ENST00000539170 SMARCA4P51532 1647 aa29.07■■■□□ 2.24
GABARAPL1-205ENST00000539170 WIZO95785 1651 aa28.97■■■□□ 2.23
GABARAPL1-205ENST00000539170 PEG3Q9GZU2 1588 aa28.74■■■□□ 2.19
GABARAPL1-205ENST00000539170 TOP2AP11388 1531 aaKnown RBP28.7■■■□□ 2.19
GABARAPL1-205ENST00000539170 SMARCA2P51531 1590 aa28.55■■■□□ 2.16
GABARAPL1-205ENST00000539170 EIF4G1Q04637 1599 aaKnown RBP28.55■■■□□ 2.16
GABARAPL1-205ENST00000539170 ATAD2BQ9ULI0 1458 aa28.53■■■□□ 2.16
GABARAPL1-205ENST00000539170 DNAJC5BQ9UF47 199 aa28.53■■■□□ 2.16
GABARAPL1-205ENST00000539170 CHIC1Q5VXU3 224 aa28.49■■■□□ 2.15
GABARAPL1-205ENST00000539170 CCDC88BA6NC98 1476 aa28.37■■■□□ 2.13
GABARAPL1-205ENST00000539170 BAZ1BQ9UIG0 1483 aaKnown RBP28.37■■■□□ 2.13
GABARAPL1-205ENST00000539170 HMGXB3Q12766 1538 aa28.3■■■□□ 2.12
GABARAPL1-205ENST00000539170 NCAPD3P42695 1498 aa28.28■■■□□ 2.12
GABARAPL1-205ENST00000539170 CC2D2AQ9P2K1 1620 aa28.09■■■□□ 2.09
GABARAPL1-205ENST00000539170 TRIM41Q8WV44 630 aa27.89■■■□□ 2.05
GABARAPL1-205ENST00000539170 ABCC8Q09428 1581 aa27.79■■■□□ 2.04
GABARAPL1-205ENST00000539170 CFTRP13569 1480 aa27.68■■■□□ 2.02
GABARAPL1-205ENST00000539170 PRDM2Q13029 1718 aa27.63■■■□□ 2.01
GABARAPL1-205ENST00000539170 WRNQ14191 1432 aaPredicted RBP eCLIP27.61■■■□□ 2.01
GABARAPL1-205ENST00000539170 CADPSQ9ULU8 1353 aa27.53■■■□□ 2
GABARAPL1-205ENST00000539170 SYNJ1O43426 1573 aa27.52■■■□□ 2
GABARAPL1-205ENST00000539170 TOP2BQ02880 1626 aa27.43■■□□□ 1.98
GABARAPL1-205ENST00000539170 BIVM-ERCC5R4GMW8 1640 aa27.43■■□□□ 1.98
GABARAPL1-205ENST00000539170 LOC105371045A0A1W2PR82 267 aa27.33■■□□□ 1.97
GABARAPL1-205ENST00000539170 LAMC3Q9Y6N6 1575 aa27.33■■□□□ 1.97
GABARAPL1-205ENST00000539170 FAM9AQ8IZU1 332 aaPredicted RBP27.33■■□□□ 1.96
GABARAPL1-205ENST00000539170 EEA1Q15075 1411 aa27.31■■□□□ 1.96
GABARAPL1-205ENST00000539170 CUX1P39880 1505 aa27.31■■□□□ 1.96
GABARAPL1-205ENST00000539170 SOGA1O94964 1423 aa27.27■■□□□ 1.96
GABARAPL1-205ENST00000539170 NESP48681 1621 aa27.24■■□□□ 1.95
GABARAPL1-205ENST00000539170 FANCD2Q9BXW9 1451 aa27.24■■□□□ 1.95
GABARAPL1-205ENST00000539170 RUSC2Q8N2Y8 1516 aa27.16■■□□□ 1.94
GABARAPL1-205ENST00000539170 PDS5BQ9NTI5 1447 aa27.07■■□□□ 1.92
GABARAPL1-205ENST00000539170 CEP164Q9UPV0 1460 aa27.06■■□□□ 1.92
GABARAPL1-205ENST00000539170 CSRNP3Q8WYN3 585 aa27.06■■□□□ 1.92
GABARAPL1-205ENST00000539170 DNMBPQ6XZF7 1577 aa27.06■■□□□ 1.92
GABARAPL1-205ENST00000539170 KIF21AQ7Z4S6 1674 aa26.98■■□□□ 1.91
GABARAPL1-205ENST00000539170 FGD5Q6ZNL6 1462 aa26.97■■□□□ 1.91
GABARAPL1-205ENST00000539170 KIF21BO75037 1637 aa26.97■■□□□ 1.91
GABARAPL1-205ENST00000539170 TOPBP1Q92547 1522 aa26.97■■□□□ 1.91
GABARAPL1-205ENST00000539170 GOLGA3Q08378 1498 aa26.92■■□□□ 1.9
GABARAPL1-205ENST00000539170 URB2Q14146 1524 aaKnown RBP26.91■■□□□ 1.9
GABARAPL1-205ENST00000539170 KIF27Q86VH2 1401 aa26.9■■□□□ 1.9
GABARAPL1-205ENST00000539170 EHMT2Q96KQ7 1210 aa26.89■■□□□ 1.9
GABARAPL1-205ENST00000539170 POLA1P09884 1462 aaPredicted RBP26.85■■□□□ 1.89
GABARAPL1-205ENST00000539170 TNIKQ9UKE5 1360 aa26.83■■□□□ 1.89
GABARAPL1-205ENST00000539170 CUX2O14529 1486 aa26.8■■□□□ 1.88
GABARAPL1-205ENST00000539170 PRXQ9BXM0 1461 aa26.78■■□□□ 1.88
GABARAPL1-205ENST00000539170 ERICH3Q5RHP9 1530 aa26.78■■□□□ 1.88
GABARAPL1-205ENST00000539170 ABCA10Q8WWZ4 1543 aa26.77■■□□□ 1.88
GABARAPL1-205ENST00000539170 WDR97A6NE52 1622 aa26.73■■□□□ 1.87
GABARAPL1-205ENST00000539170 MRC2Q9UBG0 1479 aa26.73■■□□□ 1.87
GABARAPL1-205ENST00000539170 RAPGEF2Q9Y4G8 1499 aa26.73■■□□□ 1.87
GABARAPL1-205ENST00000539170 RAD54L2Q9Y4B4 1467 aa26.72■■□□□ 1.87
GABARAPL1-205ENST00000539170 CEP162Q5TB80 1403 aa26.69■■□□□ 1.86
GABARAPL1-205ENST00000539170 UBTFP17480 764 aaKnown RBP26.68■■□□□ 1.86
GABARAPL1-205ENST00000539170 IGF1RP08069 1367 aa26.64■■□□□ 1.86
GABARAPL1-205ENST00000539170 WDR62O43379 1518 aa26.62■■□□□ 1.85
GABARAPL1-205ENST00000539170 TARBP1Q13395 1621 aaKnown RBP26.59■■□□□ 1.85
GABARAPL1-205ENST00000539170 ABCA5Q8WWZ7 1642 aa26.57■■□□□ 1.84
GABARAPL1-205ENST00000539170 ERCC6Q03468 1493 aa26.55■■□□□ 1.84
GABARAPL1-205ENST00000539170 THOC2Q8NI27 1593 aaKnown RBP26.53■■□□□ 1.84
GABARAPL1-205ENST00000539170 CUL7Q14999 1698 aa26.51■■□□□ 1.83
GABARAPL1-205ENST00000539170 CARMIL1Q5VZK9 1371 aa26.5■■□□□ 1.83
GABARAPL1-205ENST00000539170 CLIP1P30622 1438 aa26.45■■□□□ 1.83
GABARAPL1-205ENST00000539170 GAPVD1Q14C86 1478 aa26.45■■□□□ 1.82
GABARAPL1-205ENST00000539170 IFT140Q96RY7 1462 aa26.42■■□□□ 1.82
GABARAPL1-205ENST00000539170 TDRD9Q8NDG6 1382 aaKnown RBP26.41■■□□□ 1.82
GABARAPL1-205ENST00000539170 PBRM1Q86U86 1689 aa26.36■■□□□ 1.81
GABARAPL1-205ENST00000539170 VPS8Q8N3P4 1428 aa26.27■■□□□ 1.8
GABARAPL1-205ENST00000539170 AQRO60306 1485 aaKnown RBP eCLIP26.25■■□□□ 1.79
GABARAPL1-205ENST00000539170 GRIN2BQ13224 1484 aa26.24■■□□□ 1.79
GABARAPL1-205ENST00000539170 CTTNBP2Q8WZ74 1663 aa26.24■■□□□ 1.79
GABARAPL1-205ENST00000539170 ZNF608Q9ULD9 1512 aaPredicted RBP26.23■■□□□ 1.79
GABARAPL1-205ENST00000539170 ARAP1Q96P48 1450 aa26.22■■□□□ 1.79
GABARAPL1-205ENST00000539170 TRIM26Q12899 539 aaPredicted RBP26.22■■□□□ 1.79
GABARAPL1-205ENST00000539170 ADAMTS12P58397 1594 aa26.21■■□□□ 1.79
GABARAPL1-205ENST00000539170 EIF4G3O43432 1585 aaKnown RBP26.21■■□□□ 1.79
GABARAPL1-205ENST00000539170 ARHGAP35Q9NRY4 1499 aa26.19■■□□□ 1.78
GABARAPL1-205ENST00000539170 FHAD1B1AJZ9 1412 aa26.18■■□□□ 1.78
GABARAPL1-205ENST00000539170 PCGF6Q9BYE7 350 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms