Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 GXYLT1P5-201ENST00000614548 1189 ntBASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 AC073347.1-201ENST00000421633 2643 ntBASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 HLA-DQB2-231ENST00000435145 2026 ntBASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LCE3DQ9BYE3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 KRT89P-201ENST00000620027 1478 ntBASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 PRAL-201ENST00000624952 3286 ntBASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 AL135905.2-201ENST00000584934 1404 ntBASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LCE3DQ9BYE3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms