RNA–Protein interactions for RNA: ENST00000400309.5

PCBP3-204, Transcript of poly(rC) binding protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCBP3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP3-204ENST00000400309 NISCHQ9Y2I1 1504 aa38.48■■■■□ 3.75
PCBP3-204ENST00000400309 CCDC180Q9P1Z9 1646 aa33.63■■■□□ 2.97
PCBP3-204ENST00000400309 ZCCHC6Q5VYS8 1495 aaKnown RBP32.27■■■□□ 2.76
PCBP3-204ENST00000400309 ABCC9O60706 1549 aa32.13■■■□□ 2.73
PCBP3-204ENST00000400309 DCAF8L2P0C7V8 631 aa31.88■■■□□ 2.69
PCBP3-204ENST00000400309 DCAF1Q9Y4B6 1507 aa31.77■■■□□ 2.68
PCBP3-204ENST00000400309 MYO15BQ96JP2 1530 aa31.49■■■□□ 2.63
PCBP3-204ENST00000400309 NACADO15069 1562 aa31.4■■■□□ 2.62
PCBP3-204ENST00000400309 SHROOM4Q9ULL8 1493 aa31.24■■■□□ 2.59
PCBP3-204ENST00000400309 RB1CC1Q8TDY2 1594 aa31.19■■■□□ 2.58
PCBP3-204ENST00000400309 SCRIBQ14160 1630 aa30.95■■■□□ 2.55
PCBP3-204ENST00000400309 UNC13AQ9UPW8 1703 aa30.62■■■□□ 2.49
PCBP3-204ENST00000400309 BICRAQ9NZM4 1560 aa30.34■■■□□ 2.45
PCBP3-204ENST00000400309 PABPN1Q86U42 306 aaKnown RBP eCLIP30.28■■■□□ 2.44
PCBP3-204ENST00000400309 CECR2Q9BXF3 1484 aa29.98■■■□□ 2.39
PCBP3-204ENST00000400309 SUPT5HO00267 1087 aaKnown RBP29.9■■■□□ 2.38
PCBP3-204ENST00000400309 RSF1Q96T23 1441 aaPredicted RBP29.76■■■□□ 2.36
PCBP3-204ENST00000400309 MROH2BQ7Z745 1585 aa29.75■■■□□ 2.35
PCBP3-204ENST00000400309 BAZ1AQ9NRL2 1556 aaPredicted RBP29.69■■■□□ 2.34
PCBP3-204ENST00000400309 SMARCA4P51532 1647 aa29.64■■■□□ 2.33
PCBP3-204ENST00000400309 WIZO95785 1651 aa29.49■■■□□ 2.31
PCBP3-204ENST00000400309 EIF4G1Q04637 1599 aaKnown RBP29.41■■■□□ 2.3
PCBP3-204ENST00000400309 PEG3Q9GZU2 1588 aa29.27■■■□□ 2.28
PCBP3-204ENST00000400309 ATAD2BQ9ULI0 1458 aa29.23■■■□□ 2.27
PCBP3-204ENST00000400309 SMARCA2P51531 1590 aa29.16■■■□□ 2.26
PCBP3-204ENST00000400309 TOP2AP11388 1531 aaKnown RBP29.14■■■□□ 2.25
PCBP3-204ENST00000400309 CC2D2AQ9P2K1 1620 aa29.05■■■□□ 2.24
PCBP3-204ENST00000400309 BAZ1BQ9UIG0 1483 aaKnown RBP29.02■■■□□ 2.24
PCBP3-204ENST00000400309 NCAPD3P42695 1498 aa29.01■■■□□ 2.23
PCBP3-204ENST00000400309 HMGXB3Q12766 1538 aa28.92■■■□□ 2.22
PCBP3-204ENST00000400309 CCDC88BA6NC98 1476 aa28.87■■■□□ 2.21
PCBP3-204ENST00000400309 DNAJC5BQ9UF47 199 aa28.66■■■□□ 2.18
PCBP3-204ENST00000400309 CHIC1Q5VXU3 224 aa28.48■■■□□ 2.15
PCBP3-204ENST00000400309 CFTRP13569 1480 aa28.29■■■□□ 2.12
PCBP3-204ENST00000400309 CADPSQ9ULU8 1353 aa28.25■■■□□ 2.11
PCBP3-204ENST00000400309 ABCC8Q09428 1581 aa28.18■■■□□ 2.1
PCBP3-204ENST00000400309 NESP48681 1621 aa28.15■■■□□ 2.1
PCBP3-204ENST00000400309 PRDM2Q13029 1718 aa28.1■■■□□ 2.09
PCBP3-204ENST00000400309 TRIM41Q8WV44 630 aa28.09■■■□□ 2.09
PCBP3-204ENST00000400309 LAMC3Q9Y6N6 1575 aa28.04■■■□□ 2.08
PCBP3-204ENST00000400309 WRNQ14191 1432 aaPredicted RBP eCLIP27.99■■■□□ 2.07
PCBP3-204ENST00000400309 FANCD2Q9BXW9 1451 aa27.94■■■□□ 2.06
PCBP3-204ENST00000400309 SYNJ1O43426 1573 aa27.92■■■□□ 2.06
PCBP3-204ENST00000400309 CUX1P39880 1505 aa27.83■■■□□ 2.05
PCBP3-204ENST00000400309 PDS5BQ9NTI5 1447 aa27.82■■■□□ 2.04
PCBP3-204ENST00000400309 TOP2BQ02880 1626 aa27.79■■■□□ 2.04
PCBP3-204ENST00000400309 BIVM-ERCC5R4GMW8 1640 aa27.77■■■□□ 2.04
PCBP3-204ENST00000400309 KIF21AQ7Z4S6 1674 aa27.77■■■□□ 2.04
PCBP3-204ENST00000400309 CEP164Q9UPV0 1460 aa27.77■■■□□ 2.04
PCBP3-204ENST00000400309 URB2Q14146 1524 aaKnown RBP27.64■■■□□ 2.02
PCBP3-204ENST00000400309 DNMBPQ6XZF7 1577 aa27.62■■■□□ 2.01
PCBP3-204ENST00000400309 FAM9AQ8IZU1 332 aaPredicted RBP27.62■■■□□ 2.01
PCBP3-204ENST00000400309 TOPBP1Q92547 1522 aa27.62■■■□□ 2.01
PCBP3-204ENST00000400309 SOGA1O94964 1423 aa27.6■■■□□ 2.01
PCBP3-204ENST00000400309 FGD5Q6ZNL6 1462 aa27.55■■■□□ 2
PCBP3-204ENST00000400309 RUSC2Q8N2Y8 1516 aa27.54■■■□□ 2
PCBP3-204ENST00000400309 ERCC6Q03468 1493 aa27.53■■■□□ 2
PCBP3-204ENST00000400309 MRC2Q9UBG0 1479 aa27.51■■□□□ 1.99
PCBP3-204ENST00000400309 POLA1P09884 1462 aaPredicted RBP27.46■■□□□ 1.99
PCBP3-204ENST00000400309 LOC105371045A0A1W2PR82 267 aa27.42■■□□□ 1.98
PCBP3-204ENST00000400309 RAD54L2Q9Y4B4 1467 aa27.41■■□□□ 1.98
PCBP3-204ENST00000400309 EEA1Q15075 1411 aa27.38■■□□□ 1.97
PCBP3-204ENST00000400309 THOC2Q8NI27 1593 aaKnown RBP27.38■■□□□ 1.97
PCBP3-204ENST00000400309 WDR62O43379 1518 aa27.38■■□□□ 1.97
PCBP3-204ENST00000400309 CSRNP3Q8WYN3 585 aa27.33■■□□□ 1.97
PCBP3-204ENST00000400309 CUX2O14529 1486 aa27.32■■□□□ 1.96
PCBP3-204ENST00000400309 KIF27Q86VH2 1401 aa27.29■■□□□ 1.96
PCBP3-204ENST00000400309 ABCA10Q8WWZ4 1543 aa27.28■■□□□ 1.96
PCBP3-204ENST00000400309 EHMT2Q96KQ7 1210 aa27.28■■□□□ 1.96
PCBP3-204ENST00000400309 WDR97A6NE52 1622 aa27.24■■□□□ 1.95
PCBP3-204ENST00000400309 TARBP1Q13395 1621 aaKnown RBP27.23■■□□□ 1.95
PCBP3-204ENST00000400309 TDRD9Q8NDG6 1382 aaKnown RBP27.15■■□□□ 1.94
PCBP3-204ENST00000400309 IGF1RP08069 1367 aa27.13■■□□□ 1.93
PCBP3-204ENST00000400309 IFT140Q96RY7 1462 aa27.12■■□□□ 1.93
PCBP3-204ENST00000400309 ABCA5Q8WWZ7 1642 aa27.09■■□□□ 1.93
PCBP3-204ENST00000400309 KIF21BO75037 1637 aa27.08■■□□□ 1.93
PCBP3-204ENST00000400309 PRXQ9BXM0 1461 aa27.07■■□□□ 1.92
PCBP3-204ENST00000400309 ZNF608Q9ULD9 1512 aaPredicted RBP27.05■■□□□ 1.92
PCBP3-204ENST00000400309 GAPVD1Q14C86 1478 aa27.05■■□□□ 1.92
PCBP3-204ENST00000400309 RAPGEF2Q9Y4G8 1499 aa27.04■■□□□ 1.92
PCBP3-204ENST00000400309 GOLGA3Q08378 1498 aa27.03■■□□□ 1.92
PCBP3-204ENST00000400309 AQRO60306 1485 aaKnown RBP eCLIP27.03■■□□□ 1.92
PCBP3-204ENST00000400309 CARMIL1Q5VZK9 1371 aa26.97■■□□□ 1.91
PCBP3-204ENST00000400309 ERICH3Q5RHP9 1530 aa26.94■■□□□ 1.9
PCBP3-204ENST00000400309 UBTFP17480 764 aaKnown RBP26.94■■□□□ 1.9
PCBP3-204ENST00000400309 PBRM1Q86U86 1689 aa26.91■■□□□ 1.9
PCBP3-204ENST00000400309 EIF4G3O43432 1585 aaKnown RBP26.91■■□□□ 1.9
PCBP3-204ENST00000400309 TNIKQ9UKE5 1360 aa26.91■■□□□ 1.9
PCBP3-204ENST00000400309 CUL7Q14999 1698 aa26.88■■□□□ 1.89
PCBP3-204ENST00000400309 GRIN2BQ13224 1484 aa26.87■■□□□ 1.89
PCBP3-204ENST00000400309 ADAMTS12P58397 1594 aa26.76■■□□□ 1.87
PCBP3-204ENST00000400309 CEP162Q5TB80 1403 aa26.76■■□□□ 1.87
PCBP3-204ENST00000400309 SNAPC4Q5SXM2 1469 aa26.75■■□□□ 1.87
PCBP3-204ENST00000400309 FHAD1B1AJZ9 1412 aa26.74■■□□□ 1.87
PCBP3-204ENST00000400309 MAGI1Q96QZ7 1491 aaPredicted RBP26.66■■□□□ 1.86
PCBP3-204ENST00000400309 RANGAP1P46060 587 aaPredicted RBP26.64■■□□□ 1.86
PCBP3-204ENST00000400309 CLIP1P30622 1438 aa26.61■■□□□ 1.85
PCBP3-204ENST00000400309 SYNJ2O15056 1496 aa26.57■■□□□ 1.84
PCBP3-204ENST00000400309 CTTNBP2Q8WZ74 1663 aa26.56■■□□□ 1.84
PCBP3-204ENST00000400309 GRIN2AQ12879 1464 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 177.7 ms