RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 DCAF8L2P0C7V8 631 aa22.41■■□□□ 1.18
TRAK1-201ENST00000327628 NISCHQ9Y2I1 1504 aa21.76■■□□□ 1.07
TRAK1-201ENST00000327628 PELP1Q8IZL8 1130 aaKnown RBP21.33■■□□□ 1
TRAK1-201ENST00000327628 SUPT5HO00267 1087 aaKnown RBP21.24■□□□□ 0.99
TRAK1-201ENST00000327628 FAM9AQ8IZU1 332 aaPredicted RBP21.08■□□□□ 0.96
TRAK1-201ENST00000327628 APLP2Q06481 763 aa20.96■□□□□ 0.95
TRAK1-201ENST00000327628 SHROOM4Q9ULL8 1493 aa20.69■□□□□ 0.9
TRAK1-201ENST00000327628 ZEB1P37275 1124 aaPredicted RBP20.4■□□□□ 0.86
TRAK1-201ENST00000327628 CCER1Q8TC90 406 aaPredicted RBP20.35■□□□□ 0.85
TRAK1-201ENST00000327628 CENPBP07199 599 aaPredicted RBP20.19■□□□□ 0.82
TRAK1-201ENST00000327628 EHMT2Q96KQ7 1210 aa20.15■□□□□ 0.82
TRAK1-201ENST00000327628 ERICH6Q7L0X2 663 aa20.04■□□□□ 0.8
TRAK1-201ENST00000327628 TRIM41Q8WV44 630 aa20.02■□□□□ 0.79
TRAK1-201ENST00000327628 MYT1Q01538 1121 aa19.85■□□□□ 0.77
TRAK1-201ENST00000327628 NEFLP07196 543 aa19.83■□□□□ 0.77
TRAK1-201ENST00000327628 PCGF6Q9BYE7 350 aa19.8■□□□□ 0.76
TRAK1-201ENST00000327628 UBTFP17480 764 aaKnown RBP19.78■□□□□ 0.76
TRAK1-201ENST00000327628 ATP1B4Q9UN42 357 aaPredicted RBP19.72■□□□□ 0.75
TRAK1-201ENST00000327628 TTBK1Q5TCY1 1321 aaPredicted RBP19.59■□□□□ 0.73
TRAK1-201ENST00000327628 RANGAP1P46060 587 aaPredicted RBP19.53■□□□□ 0.72
TRAK1-201ENST00000327628 TRIM26Q12899 539 aaPredicted RBP19.4■□□□□ 0.7
TRAK1-201ENST00000327628 DAXXQ9UER7 740 aaPredicted RBP19.31■□□□□ 0.68
TRAK1-201ENST00000327628 YTHDC1Q96MU7 727 aaKnown RBP19.27■□□□□ 0.68
TRAK1-201ENST00000327628 MYT1LQ9UL68 1186 aa19.2■□□□□ 0.66
TRAK1-201ENST00000327628 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.17■□□□□ 0.66
TRAK1-201ENST00000327628 HNRNPUL2Q1KMD3 747 aaKnown RBP19.17■□□□□ 0.66
TRAK1-201ENST00000327628 HRCP23327 699 aa18.93■□□□□ 0.62
TRAK1-201ENST00000327628 POLR3GLQ9BT43 218 aa18.87■□□□□ 0.61
TRAK1-201ENST00000327628 ITGAEP38570 1179 aa18.87■□□□□ 0.61
TRAK1-201ENST00000327628 CHIC1Q5VXU3 224 aa18.86■□□□□ 0.61
TRAK1-201ENST00000327628 ZNF316A6NFI3 1004 aaPredicted RBP18.79■□□□□ 0.6
TRAK1-201ENST00000327628 RTL5Q5HYW3 569 aaPredicted RBP18.77■□□□□ 0.6
TRAK1-201ENST00000327628 PPARGC1BQ86YN6 1023 aaKnown RBP18.71■□□□□ 0.59
TRAK1-201ENST00000327628 SLC4A1APQ9BWU0 796 aaKnown RBP18.69■□□□□ 0.58
TRAK1-201ENST00000327628 CLSPNQ9HAW4 1339 aa18.69■□□□□ 0.58
TRAK1-201ENST00000327628 FAM50AQ14320 339 aaKnown RBP18.65■□□□□ 0.58
TRAK1-201ENST00000327628 ZBTB47Q9UFB7 747 aaPredicted RBP18.65■□□□□ 0.58
TRAK1-201ENST00000327628 TRIM52Q96A61 297 aa18.64■□□□□ 0.57
TRAK1-201ENST00000327628 DIEXFQ68CQ4 756 aaKnown RBP18.58■□□□□ 0.56
TRAK1-201ENST00000327628 ANP32CO43423 234 aa18.56■□□□□ 0.56
TRAK1-201ENST00000327628 NEFMP07197 916 aa18.56■□□□□ 0.56
TRAK1-201ENST00000327628 ABCC9O60706 1549 aa18.53■□□□□ 0.56
TRAK1-201ENST00000327628 LOC105371045A0A1W2PR82 267 aa18.52■□□□□ 0.56
TRAK1-201ENST00000327628 CDK11AQ9UQ88 783 aaPredicted RBP18.51■□□□□ 0.55
TRAK1-201ENST00000327628 ACIN1Q9UKV3 1341 aaKnown RBP18.36■□□□□ 0.53
TRAK1-201ENST00000327628 PABPN1Q86U42 306 aaKnown RBP eCLIP18.34■□□□□ 0.53
TRAK1-201ENST00000327628 CANXP27824 592 aaKnown RBP18.33■□□□□ 0.53
TRAK1-201ENST00000327628 NEUROD1Q13562 356 aa18.32■□□□□ 0.52
TRAK1-201ENST00000327628 CNGB1Q14028 1251 aaPredicted RBP18.3■□□□□ 0.52
TRAK1-201ENST00000327628 CSRNP3Q8WYN3 585 aa18.29■□□□□ 0.52
TRAK1-201ENST00000327628 FBLN2P98095 1184 aa18.23■□□□□ 0.51
TRAK1-201ENST00000327628 ESF1Q9H501 851 aaKnown RBP18.23■□□□□ 0.51
TRAK1-201ENST00000327628 ZNF326Q5BKZ1 582 aaKnown RBP18.22■□□□□ 0.51
TRAK1-201ENST00000327628 ANP32AP39687 249 aaKnown RBP18.17■□□□□ 0.5
TRAK1-201ENST00000327628 BCANQ96GW7 911 aa18.15■□□□□ 0.5
TRAK1-201ENST00000327628 NPM1P06748 294 aaKnown RBP eCLIP18.14■□□□□ 0.49
TRAK1-201ENST00000327628 TONSLQ96HA7 1378 aa18.11■□□□□ 0.49
TRAK1-201ENST00000327628 ANP32BQ92688 251 aaKnown RBP18.1■□□□□ 0.49
TRAK1-201ENST00000327628 CCDC180Q9P1Z9 1646 aa18.08■□□□□ 0.48
TRAK1-201ENST00000327628 UPF2Q9HAU5 1272 aaKnown RBP18.07■□□□□ 0.48
TRAK1-201ENST00000327628 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.04■□□□□ 0.48
TRAK1-201ENST00000327628 ZCCHC6Q5VYS8 1495 aaKnown RBP18.03■□□□□ 0.48
TRAK1-201ENST00000327628 SLC24A1O60721 1099 aa18.02■□□□□ 0.48
TRAK1-201ENST00000327628 SCRIBQ14160 1630 aa18.02■□□□□ 0.47
TRAK1-201ENST00000327628 DCAF1Q9Y4B6 1507 aa18.01■□□□□ 0.47
TRAK1-201ENST00000327628 STAG3Q9UJ98 1225 aa18■□□□□ 0.47
TRAK1-201ENST00000327628 ZNF777Q9ULD5 760 aaPredicted RBP17.99■□□□□ 0.47
TRAK1-201ENST00000327628 EEA1Q15075 1411 aa17.98■□□□□ 0.47
TRAK1-201ENST00000327628 GTF3C3Q9Y5Q9 886 aa17.97■□□□□ 0.47
TRAK1-201ENST00000327628 EIF5BO60841 1220 aaKnown RBP17.93■□□□□ 0.46
TRAK1-201ENST00000327628 P3H3Q8IVL6 736 aa17.89■□□□□ 0.46
TRAK1-201ENST00000327628 RSF1Q96T23 1441 aaPredicted RBP17.89■□□□□ 0.45
TRAK1-201ENST00000327628 TSPY4P0CV99 314 aa17.89■□□□□ 0.45
TRAK1-201ENST00000327628 TSPY10P0CW01 314 aa17.89■□□□□ 0.45
TRAK1-201ENST00000327628 HSP90AA1P07900 732 aaKnown RBP17.87■□□□□ 0.45
TRAK1-201ENST00000327628 RB1CC1Q8TDY2 1594 aa17.85■□□□□ 0.45
TRAK1-201ENST00000327628 WDR43Q15061 677 aaKnown RBP eCLIP17.81■□□□□ 0.44
TRAK1-201ENST00000327628 MTUS2Q5JR59 1369 aa17.81■□□□□ 0.44
TRAK1-201ENST00000327628 CHGAP10645 457 aaKnown RBP17.8■□□□□ 0.44
TRAK1-201ENST00000327628 MYH16Q9H6N6 1097 aa17.77■□□□□ 0.44
TRAK1-201ENST00000327628 CDCA8Q53HL2 280 aa17.76■□□□□ 0.43
TRAK1-201ENST00000327628 TMC1Q8TDI8 760 aa17.76■□□□□ 0.43
TRAK1-201ENST00000327628 ANP32EQ9BTT0 268 aa17.75■□□□□ 0.43
TRAK1-201ENST00000327628 ARID3CA6NKF2 412 aa17.71■□□□□ 0.43
TRAK1-201ENST00000327628 HNRNPUQ00839 825 aaKnown RBP eCLIP17.71■□□□□ 0.43
TRAK1-201ENST00000327628 GLIPR1L2Q4G1C9 344 aa17.71■□□□□ 0.42
TRAK1-201ENST00000327628 GOLGA3Q08378 1498 aa17.7■□□□□ 0.42
TRAK1-201ENST00000327628 CHMP7Q8WUX9 453 aaPredicted RBP17.7■□□□□ 0.42
TRAK1-201ENST00000327628 CLIP1P30622 1438 aa17.69■□□□□ 0.42
TRAK1-201ENST00000327628 NACADO15069 1562 aa17.68■□□□□ 0.42
TRAK1-201ENST00000327628 NPM2Q86SE8 214 aaKnown RBP17.65■□□□□ 0.42
TRAK1-201ENST00000327628 DDRGK1Q96HY6 314 aa17.65■□□□□ 0.42
TRAK1-201ENST00000327628 CCDC136Q96JN2 1154 aa17.65■□□□□ 0.42
TRAK1-201ENST00000327628 EIF4G2P78344 907 aaKnown RBP eCLIP17.64■□□□□ 0.412e-12■■■■■ 44.7
TRAK1-201ENST00000327628 FKBP8Q14318 412 aa17.63■□□□□ 0.41
TRAK1-201ENST00000327628 CFAP53Q96M91 514 aa17.62■□□□□ 0.41
TRAK1-201ENST00000327628 CDK11BP21127 795 aaKnown RBP17.61■□□□□ 0.41
TRAK1-201ENST00000327628 PLEKHD1A6NEE1 506 aa17.61■□□□□ 0.41
TRAK1-201ENST00000327628 CHMP4BQ9H444 224 aaKnown RBP17.61■□□□□ 0.41
TRAK1-201ENST00000327628 BECN1Q14457 450 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms