RNA–Protein interactions for RNA: ENST00000539935.6

CACNB4-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene CACNB4, Length 8,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-210ENST00000539935 DCAF8L2P0C7V8 631 aa21.47■■□□□ 1.03
CACNB4-210ENST00000539935 PELP1Q8IZL8 1130 aaKnown RBP21.07■□□□□ 0.96
CACNB4-210ENST00000539935 NISCHQ9Y2I1 1504 aa20.49■□□□□ 0.87
CACNB4-210ENST00000539935 SUPT5HO00267 1087 aaKnown RBP20.38■□□□□ 0.85
CACNB4-210ENST00000539935 ERICH6Q7L0X2 663 aa20.37■□□□□ 0.85
CACNB4-210ENST00000539935 CCER1Q8TC90 406 aaPredicted RBP20.09■□□□□ 0.81
CACNB4-210ENST00000539935 EHMT2Q96KQ7 1210 aa19.99■□□□□ 0.79
CACNB4-210ENST00000539935 APLP2Q06481 763 aa19.97■□□□□ 0.79
CACNB4-210ENST00000539935 MYT1Q01538 1121 aa19.83■□□□□ 0.76
CACNB4-210ENST00000539935 SHROOM4Q9ULL8 1493 aa19.78■□□□□ 0.76
CACNB4-210ENST00000539935 FAM9AQ8IZU1 332 aaPredicted RBP19.73■□□□□ 0.75
CACNB4-210ENST00000539935 CENPBP07199 599 aaPredicted RBP19.59■□□□□ 0.73
CACNB4-210ENST00000539935 TTBK1Q5TCY1 1321 aaPredicted RBP19.39■□□□□ 0.7
CACNB4-210ENST00000539935 PCGF6Q9BYE7 350 aa19.39■□□□□ 0.69
CACNB4-210ENST00000539935 YTHDC1Q96MU7 727 aaKnown RBP19.34■□□□□ 0.69
CACNB4-210ENST00000539935 ZEB1P37275 1124 aaPredicted RBP19.33■□□□□ 0.68
CACNB4-210ENST00000539935 NEFLP07196 543 aa19.31■□□□□ 0.68
CACNB4-210ENST00000539935 DAXXQ9UER7 740 aaPredicted RBP19.28■□□□□ 0.68
CACNB4-210ENST00000539935 RANGAP1P46060 587 aaPredicted RBP19.1■□□□□ 0.65
CACNB4-210ENST00000539935 ATP1B4Q9UN42 357 aaPredicted RBP19.09■□□□□ 0.65
CACNB4-210ENST00000539935 TRIM41Q8WV44 630 aa18.9■□□□□ 0.62
CACNB4-210ENST00000539935 UBTFP17480 764 aaKnown RBP18.86■□□□□ 0.61
CACNB4-210ENST00000539935 ZNF316A6NFI3 1004 aaPredicted RBP18.71■□□□□ 0.59
CACNB4-210ENST00000539935 RTL5Q5HYW3 569 aaPredicted RBP18.69■□□□□ 0.58
CACNB4-210ENST00000539935 POLR3GLQ9BT43 218 aa18.52■□□□□ 0.56
CACNB4-210ENST00000539935 CLSPNQ9HAW4 1339 aa18.51■□□□□ 0.55
CACNB4-210ENST00000539935 MYT1LQ9UL68 1186 aa18.48■□□□□ 0.55
CACNB4-210ENST00000539935 TRIM26Q12899 539 aaPredicted RBP18.44■□□□□ 0.54
CACNB4-210ENST00000539935 PPARGC1BQ86YN6 1023 aaKnown RBP18.42■□□□□ 0.54
CACNB4-210ENST00000539935 ITGAEP38570 1179 aa18.34■□□□□ 0.53
CACNB4-210ENST00000539935 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.33■□□□□ 0.53
CACNB4-210ENST00000539935 HNRNPUL2Q1KMD3 747 aaKnown RBP18.33■□□□□ 0.53
CACNB4-210ENST00000539935 HRCP23327 699 aa18.31■□□□□ 0.52
CACNB4-210ENST00000539935 SLC4A1APQ9BWU0 796 aaKnown RBP18.28■□□□□ 0.52
CACNB4-210ENST00000539935 CNGB1Q14028 1251 aaPredicted RBP18.28■□□□□ 0.52
CACNB4-210ENST00000539935 CHIC1Q5VXU3 224 aa18.16■□□□□ 0.5
CACNB4-210ENST00000539935 ZBTB47Q9UFB7 747 aaPredicted RBP18.09■□□□□ 0.49
CACNB4-210ENST00000539935 EIF5BO60841 1220 aaKnown RBP18.06■□□□□ 0.48
CACNB4-210ENST00000539935 DIEXFQ68CQ4 756 aaKnown RBP18.02■□□□□ 0.48
CACNB4-210ENST00000539935 GLIPR1L2Q4G1C9 344 aa18.01■□□□□ 0.47
CACNB4-210ENST00000539935 BCL11AQ9H165 835 aa17.95■□□□□ 0.46
CACNB4-210ENST00000539935 CDK11AQ9UQ88 783 aaPredicted RBP17.9■□□□□ 0.46
CACNB4-210ENST00000539935 ANP32BQ92688 251 aaKnown RBP17.89■□□□□ 0.45
CACNB4-210ENST00000539935 SLC24A1O60721 1099 aa17.88■□□□□ 0.45
CACNB4-210ENST00000539935 LOC105371045A0A1W2PR82 267 aa17.84■□□□□ 0.45
CACNB4-210ENST00000539935 FAM50AQ14320 339 aaKnown RBP17.83■□□□□ 0.44
CACNB4-210ENST00000539935 TRIM52Q96A61 297 aa17.81■□□□□ 0.44
CACNB4-210ENST00000539935 ANP32CO43423 234 aa17.79■□□□□ 0.44
CACNB4-210ENST00000539935 BCANQ96GW7 911 aa17.78■□□□□ 0.44
CACNB4-210ENST00000539935 CANXP27824 592 aaKnown RBP17.78■□□□□ 0.44
CACNB4-210ENST00000539935 NEUROD1Q13562 356 aa17.73■□□□□ 0.43
CACNB4-210ENST00000539935 NEFMP07197 916 aa17.71■□□□□ 0.43
CACNB4-210ENST00000539935 GTF3C3Q9Y5Q9 886 aa17.69■□□□□ 0.42
CACNB4-210ENST00000539935 ANP32AP39687 249 aaKnown RBP17.68■□□□□ 0.42
CACNB4-210ENST00000539935 CDK11BP21127 795 aaKnown RBP17.66■□□□□ 0.42
CACNB4-210ENST00000539935 ZNF326Q5BKZ1 582 aaKnown RBP17.66■□□□□ 0.42
CACNB4-210ENST00000539935 HSP90AA1P07900 732 aaKnown RBP17.61■□□□□ 0.41
CACNB4-210ENST00000539935 ABCC9O60706 1549 aa17.57■□□□□ 0.4
CACNB4-210ENST00000539935 NPM2Q86SE8 214 aaKnown RBP17.51■□□□□ 0.39
CACNB4-210ENST00000539935 UPF2Q9HAU5 1272 aaKnown RBP17.45■□□□□ 0.38
CACNB4-210ENST00000539935 TNNT2P45379 298 aaPredicted RBP17.41■□□□□ 0.38
CACNB4-210ENST00000539935 ARXQ96QS3 562 aa17.38■□□□□ 0.37
CACNB4-210ENST00000539935 CCDC180Q9P1Z9 1646 aa17.34■□□□□ 0.37
CACNB4-210ENST00000539935 ACIN1Q9UKV3 1341 aaKnown RBP17.31■□□□□ 0.36
CACNB4-210ENST00000539935 FBLN2P98095 1184 aa17.29■□□□□ 0.36
CACNB4-210ENST00000539935 FKBP8Q14318 412 aa17.22■□□□□ 0.35
CACNB4-210ENST00000539935 PABPN1Q86U42 306 aaKnown RBP eCLIP17.21■□□□□ 0.35
CACNB4-210ENST00000539935 ESF1Q9H501 851 aaKnown RBP17.19■□□□□ 0.34
CACNB4-210ENST00000539935 NBR1Q14596 966 aa17.19■□□□□ 0.34
CACNB4-210ENST00000539935 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.18■□□□□ 0.34
CACNB4-210ENST00000539935 HNRNPUQ00839 825 aaKnown RBP eCLIP17.15■□□□□ 0.34
CACNB4-210ENST00000539935 ZNF777Q9ULD5 760 aaPredicted RBP17.13■□□□□ 0.33
CACNB4-210ENST00000539935 TULP1O00294 542 aaPredicted RBP17.13■□□□□ 0.33
CACNB4-210ENST00000539935 TONSLQ96HA7 1378 aa17.13■□□□□ 0.33
CACNB4-210ENST00000539935 STAG3Q9UJ98 1225 aa17.13■□□□□ 0.33
CACNB4-210ENST00000539935 TRIM44Q96DX7 344 aaPredicted RBP17.12■□□□□ 0.33
CACNB4-210ENST00000539935 CCDC136Q96JN2 1154 aa17.11■□□□□ 0.33
CACNB4-210ENST00000539935 FAM9BQ8IZU0 186 aa17.08■□□□□ 0.33
CACNB4-210ENST00000539935 ARID3CA6NKF2 412 aa17.08■□□□□ 0.32
CACNB4-210ENST00000539935 P3H3Q8IVL6 736 aa17.06■□□□□ 0.32
CACNB4-210ENST00000539935 AMER1Q5JTC6 1135 aaPredicted RBP17.06■□□□□ 0.32
CACNB4-210ENST00000539935 NCBP3Q53F19 620 aaKnown RBP17.05■□□□□ 0.32
CACNB4-210ENST00000539935 TMC1Q8TDI8 760 aa17.05■□□□□ 0.32
CACNB4-210ENST00000539935 CHGAP10645 457 aaKnown RBP17.05■□□□□ 0.32
CACNB4-210ENST00000539935 MYH16Q9H6N6 1097 aa17.04■□□□□ 0.32
CACNB4-210ENST00000539935 DNTTIP2Q5QJE6 756 aaKnown RBP17.04■□□□□ 0.32
CACNB4-210ENST00000539935 SALL2Q9Y467 1007 aaPredicted RBP17.03■□□□□ 0.32
CACNB4-210ENST00000539935 SCRIBQ14160 1630 aa17.03■□□□□ 0.32
CACNB4-210ENST00000539935 WDR43Q15061 677 aaKnown RBP eCLIP17.01■□□□□ 0.31
CACNB4-210ENST00000539935 NCLP19338 710 aaKnown RBP17.01■□□□□ 0.31
CACNB4-210ENST00000539935 ZRSR1Q15695 479 aaKnown RBP17■□□□□ 0.31
CACNB4-210ENST00000539935 ZCCHC6Q5VYS8 1495 aaKnown RBP16.97■□□□□ 0.31
CACNB4-210ENST00000539935 PTMAP06454 111 aaKnown RBP16.97■□□□□ 0.31
CACNB4-210ENST00000539935 ANP32EQ9BTT0 268 aa16.97■□□□□ 0.31
CACNB4-210ENST00000539935 DDX10Q13206 875 aaKnown RBP16.96■□□□□ 0.31
CACNB4-210ENST00000539935 BECN1Q14457 450 aa16.95■□□□□ 0.3
CACNB4-210ENST00000539935 GOLGA6L22H0YM25 854 aa16.92■□□□□ 0.3
CACNB4-210ENST00000539935 DDRGK1Q96HY6 314 aa16.9■□□□□ 0.3
CACNB4-210ENST00000539935 PLPPR3Q6T4P5 718 aa16.9■□□□□ 0.3
CACNB4-210ENST00000539935 CSRNP3Q8WYN3 585 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms