Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 AL031432.2-201ENST00000566714 459 ntBASIC13.11□□□□□ -0.31
TRGV3P03979 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.11□□□□□ -0.31
TRGV3P03979 AL928711.1-201ENST00000570165 459 ntBASIC13.11□□□□□ -0.31
TRGV3P03979 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV3P03979 CYP2A7P1-201ENST00000595391 815 ntBASIC13.11□□□□□ -0.31
TRGV3P03979 AC013467.2-201ENST00000605472 835 ntBASIC13.11□□□□□ -0.31
TRGV3P03979 AC004877.2-201ENST00000623941 599 ntBASIC13.11□□□□□ -0.31
TRGV3P03979 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV3P03979 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV3P03979 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV3P03979 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.11□□□□□ -0.31
TRGV3P03979 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
TRGV3P03979 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
TRGV3P03979 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TRGV3P03979 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
TRGV3P03979 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV3P03979 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
TRGV3P03979 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV3P03979 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV3P03979 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV3P03979 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV3P03979 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV3P03979 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV3P03979 AC063926.3-201ENST00000624734 5658 ntBASIC13.11□□□□□ -0.31
TRGV3P03979 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.11□□□□□ -0.31
TRGV3P03979 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV3P03979 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.1□□□□□ -0.31
TRGV3P03979 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV3P03979 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.1□□□□□ -0.31
TRGV3P03979 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV3P03979 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV3P03979 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
TRGV3P03979 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV3P03979 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV3P03979 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.1□□□□□ -0.31
TRGV3P03979 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.1□□□□□ -0.31
TRGV3P03979 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV3P03979 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV3P03979 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV3P03979 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.1□□□□□ -0.31
TRGV3P03979 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.1□□□□□ -0.31
TRGV3P03979 RHOQP3-201ENST00000437982 621 ntBASIC13.1□□□□□ -0.31
TRGV3P03979 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.1□□□□□ -0.31
TRGV3P03979 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.1□□□□□ -0.31
TRGV3P03979 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.1□□□□□ -0.31
TRGV3P03979 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
TRGV3P03979 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.1□□□□□ -0.31
TRGV3P03979 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV3P03979 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.1□□□□□ -0.31
TRGV3P03979 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV3P03979 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV3P03979 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV3P03979 AC025580.3-201ENST00000617932 1424 ntBASIC13.1□□□□□ -0.31
TRGV3P03979 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV3P03979 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV3P03979 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TRGV3P03979 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV3P03979 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
TRGV3P03979 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.1□□□□□ -0.31
TRGV3P03979 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV3P03979 RNF216P1-203ENST00000404404 2427 ntBASIC13.1□□□□□ -0.31
TRGV3P03979 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV3P03979 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV3P03979 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV3P03979 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
TRGV3P03979 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV3P03979 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV3P03979 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.1□□□□□ -0.31
TRGV3P03979 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV3P03979 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV3P03979 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
TRGV3P03979 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.09□□□□□ -0.31
TRGV3P03979 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
TRGV3P03979 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV3P03979 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV3P03979 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.09□□□□□ -0.31
TRGV3P03979 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV3P03979 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV3P03979 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TRGV3P03979 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TRGV3P03979 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV3P03979 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
TRGV3P03979 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV3P03979 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TRGV3P03979 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TRGV3P03979 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV3P03979 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV3P03979 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV3P03979 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
TRGV3P03979 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV3P03979 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV3P03979 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
TRGV3P03979 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV3P03979 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV3P03979 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRGV3P03979 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.09□□□□□ -0.31
TRGV3P03979 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.09□□□□□ -0.31
TRGV3P03979 AP000347.1-202ENST00000435868 847 ntBASIC13.09□□□□□ -0.31
TRGV3P03979 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.09□□□□□ -0.31
TRGV3P03979 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms