RNA–Protein interactions for RNA: ENST00000240285.9

RDH10-201, Transcript of retinol dehydrogenase 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDH10, Length 3,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH10-201ENST00000240285 NISCHQ9Y2I1 1504 aa29.26■■■□□ 2.27
RDH10-201ENST00000240285 SUPT5HO00267 1087 aaKnown RBP28.23■■■□□ 2.11
RDH10-201ENST00000240285 DCAF8L2P0C7V8 631 aa28.23■■■□□ 2.11
RDH10-201ENST00000240285 SHROOM4Q9ULL8 1493 aa28.06■■■□□ 2.08
RDH10-201ENST00000240285 PCGF6Q9BYE7 350 aa27.18■■□□□ 1.94
RDH10-201ENST00000240285 EHMT2Q96KQ7 1210 aa27.08■■□□□ 1.93
RDH10-201ENST00000240285 FAM9AQ8IZU1 332 aaPredicted RBP26.5■■□□□ 1.83
RDH10-201ENST00000240285 PPARGC1BQ86YN6 1023 aaKnown RBP26.48■■□□□ 1.83
RDH10-201ENST00000240285 HRCP23327 699 aa26.42■■□□□ 1.82
RDH10-201ENST00000240285 LOC105371045A0A1W2PR82 267 aa26.21■■□□□ 1.79
RDH10-201ENST00000240285 TTBK1Q5TCY1 1321 aaPredicted RBP26.2■■□□□ 1.78
RDH10-201ENST00000240285 CHIC1Q5VXU3 224 aa26.16■■□□□ 1.78
RDH10-201ENST00000240285 TRIM41Q8WV44 630 aa25.8■■□□□ 1.72
RDH10-201ENST00000240285 TRIM26Q12899 539 aaPredicted RBP25.72■■□□□ 1.71
RDH10-201ENST00000240285 CCER1Q8TC90 406 aaPredicted RBP25.65■■□□□ 1.7
RDH10-201ENST00000240285 ZEB1P37275 1124 aaPredicted RBP25.57■■□□□ 1.68
RDH10-201ENST00000240285 YTHDC1Q96MU7 727 aaKnown RBP25.46■■□□□ 1.67
RDH10-201ENST00000240285 RANGAP1P46060 587 aaPredicted RBP25.37■■□□□ 1.65
RDH10-201ENST00000240285 PELP1Q8IZL8 1130 aaKnown RBP25.36■■□□□ 1.65
RDH10-201ENST00000240285 CENPBP07199 599 aaPredicted RBP25.32■■□□□ 1.64
RDH10-201ENST00000240285 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.27■■□□□ 1.64
RDH10-201ENST00000240285 MYO15BQ96JP2 1530 aa25.2■■□□□ 1.62
RDH10-201ENST00000240285 UBTFP17480 764 aaKnown RBP25.07■■□□□ 1.6
RDH10-201ENST00000240285 APLP2Q06481 763 aa25.06■■□□□ 1.6
RDH10-201ENST00000240285 DIEXFQ68CQ4 756 aaKnown RBP24.88■■□□□ 1.57
RDH10-201ENST00000240285 GTF3C3Q9Y5Q9 886 aa24.86■■□□□ 1.57
RDH10-201ENST00000240285 HNRNPUL2Q1KMD3 747 aaKnown RBP24.81■■□□□ 1.56
RDH10-201ENST00000240285 SCAF1Q9H7N4 1312 aaKnown RBP24.76■■□□□ 1.55
RDH10-201ENST00000240285 ACIN1Q9UKV3 1341 aaKnown RBP24.59■■□□□ 1.53
RDH10-201ENST00000240285 DCAF1Q9Y4B6 1507 aa24.56■■□□□ 1.52
RDH10-201ENST00000240285 NEUROD1Q13562 356 aa24.55■■□□□ 1.52
RDH10-201ENST00000240285 ITGAEP38570 1179 aa24.5■■□□□ 1.51
RDH10-201ENST00000240285 ZCCHC6Q5VYS8 1495 aaKnown RBP24.48■■□□□ 1.51
RDH10-201ENST00000240285 ATP1B4Q9UN42 357 aaPredicted RBP24.43■■□□□ 1.5
RDH10-201ENST00000240285 MYT1Q01538 1121 aa24.35■■□□□ 1.49
RDH10-201ENST00000240285 ZNF316A6NFI3 1004 aaPredicted RBP24.23■■□□□ 1.47
RDH10-201ENST00000240285 BCANQ96GW7 911 aa24.19■■□□□ 1.46
RDH10-201ENST00000240285 NEFLP07196 543 aa24.12■■□□□ 1.45
RDH10-201ENST00000240285 ERICH6Q7L0X2 663 aa24.11■■□□□ 1.45
RDH10-201ENST00000240285 ABCC9O60706 1549 aa24■■□□□ 1.43
RDH10-201ENST00000240285 MIER1Q8N108 512 aa23.98■■□□□ 1.43
RDH10-201ENST00000240285 CNGB1Q14028 1251 aaPredicted RBP23.96■■□□□ 1.43
RDH10-201ENST00000240285 PABPN1Q86U42 306 aaKnown RBP eCLIP23.91■■□□□ 1.42
RDH10-201ENST00000240285 CSRNP3Q8WYN3 585 aa23.88■■□□□ 1.41
RDH10-201ENST00000240285 SCRIBQ14160 1630 aa23.87■■□□□ 1.41
RDH10-201ENST00000240285 CCDC180Q9P1Z9 1646 aa23.86■■□□□ 1.41
RDH10-201ENST00000240285 RSF1Q96T23 1441 aaPredicted RBP23.79■■□□□ 1.4
RDH10-201ENST00000240285 FAM50AQ14320 339 aaKnown RBP23.67■■□□□ 1.38
RDH10-201ENST00000240285 POLR3GLQ9BT43 218 aa23.65■■□□□ 1.38
RDH10-201ENST00000240285 FKBP8Q14318 412 aa23.54■■□□□ 1.36
RDH10-201ENST00000240285 HIRIP3Q9BW71 556 aaPredicted RBP23.52■■□□□ 1.36
RDH10-201ENST00000240285 DDX10Q13206 875 aaKnown RBP23.5■■□□□ 1.35
RDH10-201ENST00000240285 P3H3Q8IVL6 736 aa23.46■■□□□ 1.35
RDH10-201ENST00000240285 CEP162Q5TB80 1403 aa23.45■■□□□ 1.34
RDH10-201ENST00000240285 TRIM52Q96A61 297 aa23.45■■□□□ 1.34
RDH10-201ENST00000240285 RB1CC1Q8TDY2 1594 aa23.38■■□□□ 1.33
RDH10-201ENST00000240285 CECR2Q9BXF3 1484 aa23.37■■□□□ 1.33
RDH10-201ENST00000240285 ANP32CO43423 234 aa23.36■■□□□ 1.33
RDH10-201ENST00000240285 IRX6P78412 446 aaPredicted RBP23.28■■□□□ 1.32
RDH10-201ENST00000240285 SOGA1O94964 1423 aa23.23■■□□□ 1.31
RDH10-201ENST00000240285 SUPT16HQ9Y5B9 1047 aaKnown RBP23.23■■□□□ 1.31
RDH10-201ENST00000240285 CLIP1P30622 1438 aa23.2■■□□□ 1.3
RDH10-201ENST00000240285 CDK11AQ9UQ88 783 aaPredicted RBP23.18■■□□□ 1.3
RDH10-201ENST00000240285 ARID3CA6NKF2 412 aa23.14■■□□□ 1.3
RDH10-201ENST00000240285 HNRNPUQ00839 825 aaKnown RBP eCLIP23.14■■□□□ 1.29
RDH10-201ENST00000240285 ZNF326Q5BKZ1 582 aaKnown RBP23.1■■□□□ 1.29
RDH10-201ENST00000240285 TNIKQ9UKE5 1360 aa23.1■■□□□ 1.29
RDH10-201ENST00000240285 SENP3-EIF4A1A0A087X0R7 540 aa23.07■■□□□ 1.28
RDH10-201ENST00000240285 ABCC8Q09428 1581 aa23.06■■□□□ 1.28
RDH10-201ENST00000240285 CCDC88BA6NC98 1476 aa23.06■■□□□ 1.28
RDH10-201ENST00000240285 MROH2BQ7Z745 1585 aa23.03■■□□□ 1.28
RDH10-201ENST00000240285 SIN3AQ96ST3 1273 aa23.02■■□□□ 1.28
RDH10-201ENST00000240285 ANP32EQ9BTT0 268 aa23.02■■□□□ 1.28
RDH10-201ENST00000240285 KCNH8Q96L42 1107 aa23.01■■□□□ 1.27
RDH10-201ENST00000240285 FAM9BQ8IZU0 186 aa23■■□□□ 1.27
RDH10-201ENST00000240285 GOLGA3Q08378 1498 aa22.98■■□□□ 1.27
RDH10-201ENST00000240285 RTL5Q5HYW3 569 aaPredicted RBP22.97■■□□□ 1.27
RDH10-201ENST00000240285 CLSPNQ9HAW4 1339 aa22.97■■□□□ 1.27
RDH10-201ENST00000240285 NBR1Q14596 966 aa22.91■■□□□ 1.26
RDH10-201ENST00000240285 KANK4Q5T7N3 995 aaPredicted RBP22.89■■□□□ 1.26
RDH10-201ENST00000240285 TSHZ2Q9NRE2 1034 aa22.89■■□□□ 1.26
RDH10-201ENST00000240285 WRNQ14191 1432 aaPredicted RBP eCLIP22.89■■□□□ 1.25
RDH10-201ENST00000240285 TONSLQ96HA7 1378 aa22.88■■□□□ 1.25
RDH10-201ENST00000240285 CHIC2Q9UKJ5 165 aa22.88■■□□□ 1.25
RDH10-201ENST00000240285 NPM2Q86SE8 214 aaKnown RBP22.87■■□□□ 1.25
RDH10-201ENST00000240285 RUSC2Q8N2Y8 1516 aa22.85■■□□□ 1.25
RDH10-201ENST00000240285 DAXXQ9UER7 740 aaPredicted RBP22.84■■□□□ 1.25
RDH10-201ENST00000240285 SALL2Q9Y467 1007 aaPredicted RBP22.83■■□□□ 1.25
RDH10-201ENST00000240285 WIZO95785 1651 aa22.78■■□□□ 1.24
RDH10-201ENST00000240285 EEA1Q15075 1411 aa22.77■■□□□ 1.24
RDH10-201ENST00000240285 BCL11AQ9H165 835 aa22.74■■□□□ 1.23
RDH10-201ENST00000240285 RBM19Q9Y4C8 960 aaKnown RBP22.73■■□□□ 1.23
RDH10-201ENST00000240285 CEP164Q9UPV0 1460 aa22.71■■□□□ 1.23
RDH10-201ENST00000240285 MRS2Q9HD23 443 aa22.7■■□□□ 1.22
RDH10-201ENST00000240285 RRP7BPQ9NSQ0 103 aa22.65■■□□□ 1.22
RDH10-201ENST00000240285 ANP32AP39687 249 aaKnown RBP22.63■■□□□ 1.21
RDH10-201ENST00000240285 VPS8Q8N3P4 1428 aa22.63■■□□□ 1.21
RDH10-201ENST00000240285 B4GALNT3Q6L9W6 998 aa22.6■■□□□ 1.21
RDH10-201ENST00000240285 CCDC136Q96JN2 1154 aa22.59■■□□□ 1.21
RDH10-201ENST00000240285 ZNF777Q9ULD5 760 aaPredicted RBP22.58■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms