RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 NISCHQ9Y2I1 1504 aa41.5■■■■■ 4.23
RBFOX1-207ENST00000547338 CCDC180Q9P1Z9 1646 aa36.96■■■■□ 3.51
RBFOX1-207ENST00000547338 ABCC9O60706 1549 aa36.36■■■■□ 3.41
RBFOX1-207ENST00000547338 RB1CC1Q8TDY2 1594 aa34.84■■■■□ 3.17
RBFOX1-207ENST00000547338 NACADO15069 1562 aa34.77■■■■□ 3.16
RBFOX1-207ENST00000547338 DCAF8L2P0C7V8 631 aa34.6■■■■□ 3.13
RBFOX1-207ENST00000547338 ZCCHC6Q5VYS8 1495 aaKnown RBP34.55■■■■□ 3.12
RBFOX1-207ENST00000547338 MYO15BQ96JP2 1530 aa34.53■■■■□ 3.12
RBFOX1-207ENST00000547338 DCAF1Q9Y4B6 1507 aa34.32■■■■□ 3.08
RBFOX1-207ENST00000547338 UNC13AQ9UPW8 1703 aa34.17■■■■□ 3.06
RBFOX1-207ENST00000547338 BICRAQ9NZM4 1560 aa33.94■■■■□ 3.02
RBFOX1-207ENST00000547338 PABPN1Q86U42 306 aaKnown RBP eCLIP33.94■■■■□ 3.02
RBFOX1-207ENST00000547338 SCRIBQ14160 1630 aa33.72■■■□□ 2.99
RBFOX1-207ENST00000547338 DNAJC5BQ9UF47 199 aa33.65■■■□□ 2.98
RBFOX1-207ENST00000547338 SHROOM4Q9ULL8 1493 aa33.42■■■□□ 2.94
RBFOX1-207ENST00000547338 EIF4G1Q04637 1599 aaKnown RBP32.98■■■□□ 2.87
RBFOX1-207ENST00000547338 CC2D2AQ9P2K1 1620 aa32.9■■■□□ 2.86
RBFOX1-207ENST00000547338 CECR2Q9BXF3 1484 aa32.67■■■□□ 2.82
RBFOX1-207ENST00000547338 SMARCA4P51532 1647 aa32.25■■■□□ 2.75
RBFOX1-207ENST00000547338 BAZ1AQ9NRL2 1556 aaPredicted RBP32.13■■■□□ 2.73
RBFOX1-207ENST00000547338 NCAPD3P42695 1498 aa32.12■■■□□ 2.73
RBFOX1-207ENST00000547338 ATAD2BQ9ULI0 1458 aa32.12■■■□□ 2.73
RBFOX1-207ENST00000547338 MROH2BQ7Z745 1585 aa32.02■■■□□ 2.72
RBFOX1-207ENST00000547338 SMARCA2P51531 1590 aa32.01■■■□□ 2.72
RBFOX1-207ENST00000547338 PEG3Q9GZU2 1588 aa31.95■■■□□ 2.71
RBFOX1-207ENST00000547338 HMGXB3Q12766 1538 aa31.94■■■□□ 2.7
RBFOX1-207ENST00000547338 BAZ1BQ9UIG0 1483 aaKnown RBP31.79■■■□□ 2.68
RBFOX1-207ENST00000547338 WIZO95785 1651 aa31.65■■■□□ 2.66
RBFOX1-207ENST00000547338 RSF1Q96T23 1441 aaPredicted RBP31.56■■■□□ 2.64
RBFOX1-207ENST00000547338 NESP48681 1621 aa31.46■■■□□ 2.63
RBFOX1-207ENST00000547338 LAMC3Q9Y6N6 1575 aa31.27■■■□□ 2.6
RBFOX1-207ENST00000547338 TOP2AP11388 1531 aaKnown RBP31.27■■■□□ 2.6
RBFOX1-207ENST00000547338 ERCC6Q03468 1493 aa31.26■■■□□ 2.6
RBFOX1-207ENST00000547338 CADPSQ9ULU8 1353 aa31.14■■■□□ 2.58
RBFOX1-207ENST00000547338 KIF21AQ7Z4S6 1674 aa31.06■■■□□ 2.56
RBFOX1-207ENST00000547338 CUX2O14529 1486 aa31.05■■■□□ 2.56
RBFOX1-207ENST00000547338 THOC2Q8NI27 1593 aaKnown RBP31.03■■■□□ 2.56
RBFOX1-207ENST00000547338 PDS5BQ9NTI5 1447 aa31.01■■■□□ 2.56
RBFOX1-207ENST00000547338 CFTRP13569 1480 aa30.95■■■□□ 2.55
RBFOX1-207ENST00000547338 CCDC88BA6NC98 1476 aa30.92■■■□□ 2.54
RBFOX1-207ENST00000547338 FANCD2Q9BXW9 1451 aa30.79■■■□□ 2.52
RBFOX1-207ENST00000547338 MRC2Q9UBG0 1479 aa30.77■■■□□ 2.52
RBFOX1-207ENST00000547338 CEP164Q9UPV0 1460 aa30.75■■■□□ 2.51
RBFOX1-207ENST00000547338 WDR62O43379 1518 aa30.71■■■□□ 2.51
RBFOX1-207ENST00000547338 PRDM2Q13029 1718 aa30.69■■■□□ 2.5
RBFOX1-207ENST00000547338 URB2Q14146 1524 aaKnown RBP30.57■■■□□ 2.48
RBFOX1-207ENST00000547338 SUPT5HO00267 1087 aaKnown RBP30.49■■■□□ 2.47
RBFOX1-207ENST00000547338 DNAJC5Q9H3Z4 198 aa30.35■■■□□ 2.45
RBFOX1-207ENST00000547338 TOPBP1Q92547 1522 aa30.31■■■□□ 2.44
RBFOX1-207ENST00000547338 DNMBPQ6XZF7 1577 aa30.24■■■□□ 2.43
RBFOX1-207ENST00000547338 ABCC8Q09428 1581 aa30.19■■■□□ 2.42
RBFOX1-207ENST00000547338 IFT140Q96RY7 1462 aa30.11■■■□□ 2.41
RBFOX1-207ENST00000547338 ZNF608Q9ULD9 1512 aaPredicted RBP30.09■■■□□ 2.41
RBFOX1-207ENST00000547338 CUX1P39880 1505 aa30.04■■■□□ 2.4
RBFOX1-207ENST00000547338 POLA1P09884 1462 aaPredicted RBP30.04■■■□□ 2.4
RBFOX1-207ENST00000547338 TARBP1Q13395 1621 aaKnown RBP30.04■■■□□ 2.4
RBFOX1-207ENST00000547338 FGD5Q6ZNL6 1462 aa29.93■■■□□ 2.38
RBFOX1-207ENST00000547338 EIF4G3O43432 1585 aaKnown RBP29.93■■■□□ 2.38
RBFOX1-207ENST00000547338 RAD54L2Q9Y4B4 1467 aa29.93■■■□□ 2.38
RBFOX1-207ENST00000547338 SOGA1O94964 1423 aa29.86■■■□□ 2.37
RBFOX1-207ENST00000547338 AQRO60306 1485 aaKnown RBP eCLIP29.85■■■□□ 2.37
RBFOX1-207ENST00000547338 WDR97A6NE52 1622 aa29.75■■■□□ 2.35
RBFOX1-207ENST00000547338 TDRD9Q8NDG6 1382 aaKnown RBP29.75■■■□□ 2.35
RBFOX1-207ENST00000547338 SYNJ1O43426 1573 aa29.72■■■□□ 2.35
RBFOX1-207ENST00000547338 BIVM-ERCC5R4GMW8 1640 aa29.7■■■□□ 2.35
RBFOX1-207ENST00000547338 WRNQ14191 1432 aaPredicted RBP eCLIP29.7■■■□□ 2.34
RBFOX1-207ENST00000547338 TOP2BQ02880 1626 aa29.7■■■□□ 2.34
RBFOX1-207ENST00000547338 OSCARQ8IYS5 282 aa29.67■■■□□ 2.34
RBFOX1-207ENST00000547338 ABCA10Q8WWZ4 1543 aa29.62■■■□□ 2.33
RBFOX1-207ENST00000547338 CHD1O14646 1710 aa29.59■■■□□ 2.33
RBFOX1-207ENST00000547338 ABCA5Q8WWZ7 1642 aa29.57■■■□□ 2.32
RBFOX1-207ENST00000547338 SNAPC4Q5SXM2 1469 aa29.56■■■□□ 2.32
RBFOX1-207ENST00000547338 GRIN2BQ13224 1484 aa29.54■■■□□ 2.32
RBFOX1-207ENST00000547338 GAPVD1Q14C86 1478 aa29.52■■■□□ 2.32
RBFOX1-207ENST00000547338 PBRM1Q86U86 1689 aa29.5■■■□□ 2.31
RBFOX1-207ENST00000547338 MAGI1Q96QZ7 1491 aaPredicted RBP29.48■■■□□ 2.31
RBFOX1-207ENST00000547338 FBLN2P98095 1184 aa29.4■■■□□ 2.3
RBFOX1-207ENST00000547338 SYNJ2O15056 1496 aa29.39■■■□□ 2.29
RBFOX1-207ENST00000547338 RIMBP3CA6NJZ7 1639 aa29.34■■■□□ 2.29
RBFOX1-207ENST00000547338 RIMBP3BA6NNM3 1639 aa29.34■■■□□ 2.29
RBFOX1-207ENST00000547338 RIMBP3Q9UFD9 1639 aa29.34■■■□□ 2.29
RBFOX1-207ENST00000547338 ARHGEF11O15085 1522 aa29.3■■■□□ 2.28
RBFOX1-207ENST00000547338 CHMP7Q8WUX9 453 aaPredicted RBP29.3■■■□□ 2.28
RBFOX1-207ENST00000547338 CLASP1Q7Z460 1538 aa29.3■■■□□ 2.28
RBFOX1-207ENST00000547338 ADAMTS12P58397 1594 aa29.29■■■□□ 2.28
RBFOX1-207ENST00000547338 ERICH3Q5RHP9 1530 aa29.25■■■□□ 2.27
RBFOX1-207ENST00000547338 TRIM41Q8WV44 630 aa29.2■■■□□ 2.27
RBFOX1-207ENST00000547338 GRIN2AQ12879 1464 aa29.19■■■□□ 2.26
RBFOX1-207ENST00000547338 FHAD1B1AJZ9 1412 aa29.16■■■□□ 2.26
RBFOX1-207ENST00000547338 CEP170Q5SW79 1584 aa29.1■■■□□ 2.25
RBFOX1-207ENST00000547338 NUP160Q12769 1436 aa29.1■■■□□ 2.25
RBFOX1-207ENST00000547338 ARAP1Q96P48 1450 aa29.08■■■□□ 2.25
RBFOX1-207ENST00000547338 KIF27Q86VH2 1401 aa29.05■■■□□ 2.24
RBFOX1-207ENST00000547338 IGF1RP08069 1367 aa29.04■■■□□ 2.24
RBFOX1-207ENST00000547338 CYB5RLQ6IPT4 315 aa28.95■■■□□ 2.23
RBFOX1-207ENST00000547338 CUL7Q14999 1698 aa28.92■■■□□ 2.22
RBFOX1-207ENST00000547338 SHROOM2Q13796 1616 aa28.92■■■□□ 2.22
RBFOX1-207ENST00000547338 ERCC6L2Q5T890 1561 aa28.92■■■□□ 2.22
RBFOX1-207ENST00000547338 RUSC2Q8N2Y8 1516 aa28.87■■■□□ 2.21
RBFOX1-207ENST00000547338 CARMIL1Q5VZK9 1371 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms