Protein–RNA interactions for Protein: A5X5Y0

HTR3E, 5-hydroxytryptamine receptor 3E, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3EA5X5Y0 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3EA5X5Y0 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3EA5X5Y0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HTR3EA5X5Y0 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
HTR3EA5X5Y0 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3EA5X5Y0 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3EA5X5Y0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3EA5X5Y0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.49■□□□□ 0.07
HTR3EA5X5Y0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.49■□□□□ 0.07
HTR3EA5X5Y0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3EA5X5Y0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3EA5X5Y0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.49■□□□□ 0.07
HTR3EA5X5Y0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.49■□□□□ 0.07
HTR3EA5X5Y0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.49■□□□□ 0.07
HTR3EA5X5Y0 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.49■□□□□ 0.07
HTR3EA5X5Y0 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
HTR3EA5X5Y0 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
HTR3EA5X5Y0 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3EA5X5Y0 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.49■□□□□ 0.07
HTR3EA5X5Y0 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3EA5X5Y0 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.49■□□□□ 0.07
HTR3EA5X5Y0 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3EA5X5Y0 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3EA5X5Y0 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3EA5X5Y0 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3EA5X5Y0 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.49■□□□□ 0.07
HTR3EA5X5Y0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.49■□□□□ 0.07
HTR3EA5X5Y0 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3EA5X5Y0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HTR3EA5X5Y0 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 AC092068.3-201ENST00000587894 2016 ntBASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 AP000867.3-201ENST00000524675 377 ntBASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HTR3EA5X5Y0 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 AC097637.2-201ENST00000624096 1997 ntBASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 HLA-J-202ENST00000469281 1241 ntBASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 AP005117.1-201ENST00000584346 1413 ntBASIC15.47■□□□□ 0.07
HTR3EA5X5Y0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms