RNA–Protein interactions for RNA: ENST00000331769.6

CSF3-202, Transcript of colony stimulating factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSF3, Length 1,673 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3-202ENST00000331769 NISCHQ9Y2I1 1504 aa41.89■■■■■ 4.3
CSF3-202ENST00000331769 CCDC180Q9P1Z9 1646 aa37.12■■■■□ 3.53
CSF3-202ENST00000331769 ABCC9O60706 1549 aa35.9■■■■□ 3.34
CSF3-202ENST00000331769 ZCCHC6Q5VYS8 1495 aaKnown RBP35.04■■■■□ 3.2
CSF3-202ENST00000331769 DCAF8L2P0C7V8 631 aa34.74■■■■□ 3.15
CSF3-202ENST00000331769 NACADO15069 1562 aa34.72■■■■□ 3.15
CSF3-202ENST00000331769 RB1CC1Q8TDY2 1594 aa34.68■■■■□ 3.14
CSF3-202ENST00000331769 DCAF1Q9Y4B6 1507 aa34.65■■■■□ 3.14
CSF3-202ENST00000331769 MYO15BQ96JP2 1530 aa34.6■■■■□ 3.13
CSF3-202ENST00000331769 UNC13AQ9UPW8 1703 aa34.05■■■■□ 3.04
CSF3-202ENST00000331769 SCRIBQ14160 1630 aa33.96■■■■□ 3.03
CSF3-202ENST00000331769 BICRAQ9NZM4 1560 aa33.68■■■□□ 2.98
CSF3-202ENST00000331769 PABPN1Q86U42 306 aaKnown RBP eCLIP33.55■■■□□ 2.96
CSF3-202ENST00000331769 SHROOM4Q9ULL8 1493 aa33.41■■■□□ 2.94
CSF3-202ENST00000331769 EIF4G1Q04637 1599 aaKnown RBP32.74■■■□□ 2.83
CSF3-202ENST00000331769 CECR2Q9BXF3 1484 aa32.63■■■□□ 2.81
CSF3-202ENST00000331769 CC2D2AQ9P2K1 1620 aa32.51■■■□□ 2.79
CSF3-202ENST00000331769 DNAJC5BQ9UF47 199 aa32.49■■■□□ 2.79
CSF3-202ENST00000331769 SMARCA4P51532 1647 aa32.48■■■□□ 2.79
CSF3-202ENST00000331769 BAZ1AQ9NRL2 1556 aaPredicted RBP32.44■■■□□ 2.78
CSF3-202ENST00000331769 MROH2BQ7Z745 1585 aa32.34■■■□□ 2.77
CSF3-202ENST00000331769 ATAD2BQ9ULI0 1458 aa32.13■■■□□ 2.73
CSF3-202ENST00000331769 PEG3Q9GZU2 1588 aa32.11■■■□□ 2.73
CSF3-202ENST00000331769 SMARCA2P51531 1590 aa32.1■■■□□ 2.73
CSF3-202ENST00000331769 RSF1Q96T23 1441 aaPredicted RBP32.07■■■□□ 2.72
CSF3-202ENST00000331769 WIZO95785 1651 aa32.06■■■□□ 2.72
CSF3-202ENST00000331769 NCAPD3P42695 1498 aa31.99■■■□□ 2.71
CSF3-202ENST00000331769 HMGXB3Q12766 1538 aa31.96■■■□□ 2.71
CSF3-202ENST00000331769 BAZ1BQ9UIG0 1483 aaKnown RBP31.91■■■□□ 2.7
CSF3-202ENST00000331769 TOP2AP11388 1531 aaKnown RBP31.7■■■□□ 2.67
CSF3-202ENST00000331769 SUPT5HO00267 1087 aaKnown RBP31.55■■■□□ 2.64
CSF3-202ENST00000331769 CCDC88BA6NC98 1476 aa31.29■■■□□ 2.6
CSF3-202ENST00000331769 NESP48681 1621 aa31.22■■■□□ 2.59
CSF3-202ENST00000331769 LAMC3Q9Y6N6 1575 aa31.14■■■□□ 2.58
CSF3-202ENST00000331769 CADPSQ9ULU8 1353 aa31.07■■■□□ 2.56
CSF3-202ENST00000331769 CFTRP13569 1480 aa31.02■■■□□ 2.56
CSF3-202ENST00000331769 PRDM2Q13029 1718 aa30.97■■■□□ 2.55
CSF3-202ENST00000331769 KIF21AQ7Z4S6 1674 aa30.93■■■□□ 2.54
CSF3-202ENST00000331769 ERCC6Q03468 1493 aa30.87■■■□□ 2.53
CSF3-202ENST00000331769 PDS5BQ9NTI5 1447 aa30.84■■■□□ 2.53
CSF3-202ENST00000331769 FANCD2Q9BXW9 1451 aa30.79■■■□□ 2.52
CSF3-202ENST00000331769 CEP164Q9UPV0 1460 aa30.71■■■□□ 2.51
CSF3-202ENST00000331769 THOC2Q8NI27 1593 aaKnown RBP30.7■■■□□ 2.5
CSF3-202ENST00000331769 MRC2Q9UBG0 1479 aa30.58■■■□□ 2.49
CSF3-202ENST00000331769 WDR62O43379 1518 aa30.5■■■□□ 2.47
CSF3-202ENST00000331769 URB2Q14146 1524 aaKnown RBP30.5■■■□□ 2.47
CSF3-202ENST00000331769 DNMBPQ6XZF7 1577 aa30.38■■■□□ 2.45
CSF3-202ENST00000331769 ABCC8Q09428 1581 aa30.37■■■□□ 2.45
CSF3-202ENST00000331769 TOPBP1Q92547 1522 aa30.36■■■□□ 2.45
CSF3-202ENST00000331769 CUX2O14529 1486 aa30.35■■■□□ 2.45
CSF3-202ENST00000331769 CUX1P39880 1505 aa30.32■■■□□ 2.45
CSF3-202ENST00000331769 SYNJ1O43426 1573 aa30.24■■■□□ 2.43
CSF3-202ENST00000331769 WRNQ14191 1432 aaPredicted RBP eCLIP30.22■■■□□ 2.43
CSF3-202ENST00000331769 BIVM-ERCC5R4GMW8 1640 aa30.19■■■□□ 2.42
CSF3-202ENST00000331769 TOP2BQ02880 1626 aa30.16■■■□□ 2.42
CSF3-202ENST00000331769 POLA1P09884 1462 aaPredicted RBP30.14■■■□□ 2.42
CSF3-202ENST00000331769 FGD5Q6ZNL6 1462 aa30.14■■■□□ 2.42
CSF3-202ENST00000331769 TARBP1Q13395 1621 aaKnown RBP30.04■■■□□ 2.4
CSF3-202ENST00000331769 IFT140Q96RY7 1462 aa30.01■■■□□ 2.39
CSF3-202ENST00000331769 RAD54L2Q9Y4B4 1467 aa30.01■■■□□ 2.39
CSF3-202ENST00000331769 WDR97A6NE52 1622 aa29.96■■■□□ 2.39
CSF3-202ENST00000331769 SOGA1O94964 1423 aa29.94■■■□□ 2.38
CSF3-202ENST00000331769 ZNF608Q9ULD9 1512 aaPredicted RBP29.92■■■□□ 2.38
CSF3-202ENST00000331769 EIF4G3O43432 1585 aaKnown RBP29.88■■■□□ 2.37
CSF3-202ENST00000331769 ABCA10Q8WWZ4 1543 aa29.83■■■□□ 2.37
CSF3-202ENST00000331769 AQRO60306 1485 aaKnown RBP eCLIP29.76■■■□□ 2.35
CSF3-202ENST00000331769 ABCA5Q8WWZ7 1642 aa29.75■■■□□ 2.35
CSF3-202ENST00000331769 TDRD9Q8NDG6 1382 aaKnown RBP29.75■■■□□ 2.35
CSF3-202ENST00000331769 TRIM41Q8WV44 630 aa29.72■■■□□ 2.35
CSF3-202ENST00000331769 PBRM1Q86U86 1689 aa29.69■■■□□ 2.34
CSF3-202ENST00000331769 CHIC1Q5VXU3 224 aa29.67■■■□□ 2.34
CSF3-202ENST00000331769 GAPVD1Q14C86 1478 aa29.64■■■□□ 2.34
CSF3-202ENST00000331769 GRIN2BQ13224 1484 aa29.57■■■□□ 2.32
CSF3-202ENST00000331769 SNAPC4Q5SXM2 1469 aa29.54■■■□□ 2.32
CSF3-202ENST00000331769 KIF27Q86VH2 1401 aa29.52■■■□□ 2.32
CSF3-202ENST00000331769 RUSC2Q8N2Y8 1516 aa29.48■■■□□ 2.31
CSF3-202ENST00000331769 ERICH3Q5RHP9 1530 aa29.48■■■□□ 2.31
CSF3-202ENST00000331769 MAGI1Q96QZ7 1491 aaPredicted RBP29.45■■■□□ 2.31
CSF3-202ENST00000331769 ADAMTS12P58397 1594 aa29.45■■■□□ 2.3
CSF3-202ENST00000331769 CHD1O14646 1710 aa29.44■■■□□ 2.3
CSF3-202ENST00000331769 CUL7Q14999 1698 aa29.34■■■□□ 2.29
CSF3-202ENST00000331769 SYNJ2O15056 1496 aa29.34■■■□□ 2.29
CSF3-202ENST00000331769 IGF1RP08069 1367 aa29.33■■■□□ 2.29
CSF3-202ENST00000331769 FHAD1B1AJZ9 1412 aa29.29■■■□□ 2.28
CSF3-202ENST00000331769 FBLN2P98095 1184 aa29.25■■■□□ 2.27
CSF3-202ENST00000331769 GRIN2AQ12879 1464 aa29.23■■■□□ 2.27
CSF3-202ENST00000331769 EEA1Q15075 1411 aa29.21■■■□□ 2.27
CSF3-202ENST00000331769 CHMP7Q8WUX9 453 aaPredicted RBP29.2■■■□□ 2.26
CSF3-202ENST00000331769 CARMIL1Q5VZK9 1371 aa29.17■■■□□ 2.26
CSF3-202ENST00000331769 FAM9AQ8IZU1 332 aaPredicted RBP29.17■■■□□ 2.26
CSF3-202ENST00000331769 CEP170Q5SW79 1584 aa29.13■■■□□ 2.25
CSF3-202ENST00000331769 PRXQ9BXM0 1461 aa29.1■■■□□ 2.25
CSF3-202ENST00000331769 RAPGEF2Q9Y4G8 1499 aa29.08■■■□□ 2.25
CSF3-202ENST00000331769 OSCARQ8IYS5 282 aa29.07■■■□□ 2.24
CSF3-202ENST00000331769 CSRNP3Q8WYN3 585 aa29.07■■■□□ 2.24
CSF3-202ENST00000331769 CLASP1Q7Z460 1538 aa29.06■■■□□ 2.24
CSF3-202ENST00000331769 NUP160Q12769 1436 aa29.06■■■□□ 2.24
CSF3-202ENST00000331769 KIF21BO75037 1637 aa29■■■□□ 2.23
CSF3-202ENST00000331769 CTTNBP2Q8WZ74 1663 aa28.92■■■□□ 2.22
CSF3-202ENST00000331769 SHROOM2Q13796 1616 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms