RNA–Protein interactions for RNA: ENST00000559123.5

PSME1-205, Transcript of proteasome activator subunit 1, humanhuman

TSL 5 BASIC

Gene PSME1, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-205ENST00000559123 NISCHQ9Y2I1 1504 aa41.47■■■■■ 4.23
PSME1-205ENST00000559123 CCDC180Q9P1Z9 1646 aa36.75■■■■□ 3.47
PSME1-205ENST00000559123 ABCC9O60706 1549 aa35.5■■■■□ 3.27
PSME1-205ENST00000559123 ZCCHC6Q5VYS8 1495 aaKnown RBP34.66■■■■□ 3.14
PSME1-205ENST00000559123 DCAF8L2P0C7V8 631 aa34.42■■■■□ 3.1
PSME1-205ENST00000559123 NACADO15069 1562 aa34.4■■■■□ 3.1
PSME1-205ENST00000559123 RB1CC1Q8TDY2 1594 aa34.35■■■■□ 3.09
PSME1-205ENST00000559123 DCAF1Q9Y4B6 1507 aa34.34■■■■□ 3.09
PSME1-205ENST00000559123 MYO15BQ96JP2 1530 aa34.32■■■■□ 3.08
PSME1-205ENST00000559123 UNC13AQ9UPW8 1703 aa33.65■■■□□ 2.98
PSME1-205ENST00000559123 SCRIBQ14160 1630 aa33.56■■■□□ 2.96
PSME1-205ENST00000559123 BICRAQ9NZM4 1560 aa33.29■■■□□ 2.92
PSME1-205ENST00000559123 PABPN1Q86U42 306 aaKnown RBP eCLIP33.19■■■□□ 2.94e-6■□□□□ 11
PSME1-205ENST00000559123 SHROOM4Q9ULL8 1493 aa33.02■■■□□ 2.88
PSME1-205ENST00000559123 EIF4G1Q04637 1599 aaKnown RBP32.38■■■□□ 2.77
PSME1-205ENST00000559123 CECR2Q9BXF3 1484 aa32.25■■■□□ 2.75
PSME1-205ENST00000559123 CC2D2AQ9P2K1 1620 aa32.15■■■□□ 2.74
PSME1-205ENST00000559123 BAZ1AQ9NRL2 1556 aaPredicted RBP32.14■■■□□ 2.74
PSME1-205ENST00000559123 SMARCA4P51532 1647 aa32.13■■■□□ 2.73
PSME1-205ENST00000559123 DNAJC5BQ9UF47 199 aa32.12■■■□□ 2.73
PSME1-205ENST00000559123 MROH2BQ7Z745 1585 aa31.98■■■□□ 2.71
PSME1-205ENST00000559123 SMARCA2P51531 1590 aa31.81■■■□□ 2.68
PSME1-205ENST00000559123 ATAD2BQ9ULI0 1458 aa31.8■■■□□ 2.68
PSME1-205ENST00000559123 PEG3Q9GZU2 1588 aa31.8■■■□□ 2.68
PSME1-205ENST00000559123 RSF1Q96T23 1441 aaPredicted RBP31.74■■■□□ 2.67
PSME1-205ENST00000559123 NCAPD3P42695 1498 aa31.7■■■□□ 2.66
PSME1-205ENST00000559123 WIZO95785 1651 aa31.69■■■□□ 2.66
PSME1-205ENST00000559123 HMGXB3Q12766 1538 aa31.65■■■□□ 2.66
PSME1-205ENST00000559123 BAZ1BQ9UIG0 1483 aaKnown RBP31.59■■■□□ 2.65
PSME1-205ENST00000559123 TOP2AP11388 1531 aaKnown RBP31.37■■■□□ 2.61
PSME1-205ENST00000559123 SUPT5HO00267 1087 aaKnown RBP31.24■■■□□ 2.59
PSME1-205ENST00000559123 CCDC88BA6NC98 1476 aa30.95■■■□□ 2.55
PSME1-205ENST00000559123 LAMC3Q9Y6N6 1575 aa30.85■■■□□ 2.53
PSME1-205ENST00000559123 NESP48681 1621 aa30.84■■■□□ 2.53
PSME1-205ENST00000559123 CADPSQ9ULU8 1353 aa30.79■■■□□ 2.52
PSME1-205ENST00000559123 CFTRP13569 1480 aa30.72■■■□□ 2.51
PSME1-205ENST00000559123 PRDM2Q13029 1718 aa30.65■■■□□ 2.5
PSME1-205ENST00000559123 PDS5BQ9NTI5 1447 aa30.58■■■□□ 2.49
PSME1-205ENST00000559123 ERCC6Q03468 1493 aa30.57■■■□□ 2.48
PSME1-205ENST00000559123 KIF21AQ7Z4S6 1674 aa30.56■■■□□ 2.48
PSME1-205ENST00000559123 FANCD2Q9BXW9 1451 aa30.48■■■□□ 2.47
PSME1-205ENST00000559123 CEP164Q9UPV0 1460 aa30.42■■■□□ 2.46
PSME1-205ENST00000559123 THOC2Q8NI27 1593 aaKnown RBP30.33■■■□□ 2.45
PSME1-205ENST00000559123 MRC2Q9UBG0 1479 aa30.28■■■□□ 2.44
PSME1-205ENST00000559123 WDR62O43379 1518 aa30.18■■■□□ 2.42
PSME1-205ENST00000559123 URB2Q14146 1524 aaKnown RBP30.16■■■□□ 2.42
PSME1-205ENST00000559123 CUX2O14529 1486 aa30.09■■■□□ 2.41
PSME1-205ENST00000559123 DNMBPQ6XZF7 1577 aa30.07■■■□□ 2.4
PSME1-205ENST00000559123 TOPBP1Q92547 1522 aa30.05■■■□□ 2.4
PSME1-205ENST00000559123 ABCC8Q09428 1581 aa30.04■■■□□ 2.4
PSME1-205ENST00000559123 CUX1P39880 1505 aa29.98■■■□□ 2.39
PSME1-205ENST00000559123 WRNQ14191 1432 aaPredicted RBP eCLIP29.93■■■□□ 2.38
PSME1-205ENST00000559123 SYNJ1O43426 1573 aa29.87■■■□□ 2.37
PSME1-205ENST00000559123 BIVM-ERCC5R4GMW8 1640 aa29.87■■■□□ 2.37
PSME1-205ENST00000559123 TOP2BQ02880 1626 aa29.85■■■□□ 2.37
PSME1-205ENST00000559123 POLA1P09884 1462 aaPredicted RBP29.82■■■□□ 2.36
PSME1-205ENST00000559123 FGD5Q6ZNL6 1462 aa29.81■■■□□ 2.36
PSME1-205ENST00000559123 IFT140Q96RY7 1462 aa29.74■■■□□ 2.35
PSME1-205ENST00000559123 TARBP1Q13395 1621 aaKnown RBP29.7■■■□□ 2.34
PSME1-205ENST00000559123 RAD54L2Q9Y4B4 1467 aa29.68■■■□□ 2.34
PSME1-205ENST00000559123 SOGA1O94964 1423 aa29.67■■■□□ 2.34
PSME1-205ENST00000559123 WDR97A6NE52 1622 aa29.61■■■□□ 2.33
PSME1-205ENST00000559123 ZNF608Q9ULD9 1512 aaPredicted RBP29.57■■■□□ 2.32
PSME1-205ENST00000559123 ABCA10Q8WWZ4 1543 aa29.54■■■□□ 2.32
PSME1-205ENST00000559123 EIF4G3O43432 1585 aaKnown RBP29.53■■■□□ 2.32
PSME1-205ENST00000559123 TRIM41Q8WV44 630 aa29.47■■■□□ 2.31
PSME1-205ENST00000559123 TDRD9Q8NDG6 1382 aaKnown RBP29.45■■■□□ 2.31
PSME1-205ENST00000559123 AQRO60306 1485 aaKnown RBP eCLIP29.44■■■□□ 2.39e-8■■■■■ 27.5
PSME1-205ENST00000559123 ABCA5Q8WWZ7 1642 aa29.42■■■□□ 2.3
PSME1-205ENST00000559123 CHIC1Q5VXU3 224 aa29.39■■■□□ 2.3
PSME1-205ENST00000559123 PBRM1Q86U86 1689 aa29.36■■■□□ 2.29
PSME1-205ENST00000559123 GAPVD1Q14C86 1478 aa29.36■■■□□ 2.29
PSME1-205ENST00000559123 GRIN2BQ13224 1484 aa29.29■■■□□ 2.28
PSME1-205ENST00000559123 KIF27Q86VH2 1401 aa29.27■■■□□ 2.28
PSME1-205ENST00000559123 SNAPC4Q5SXM2 1469 aa29.23■■■□□ 2.27
PSME1-205ENST00000559123 ERICH3Q5RHP9 1530 aa29.2■■■□□ 2.27
PSME1-205ENST00000559123 MAGI1Q96QZ7 1491 aaPredicted RBP29.19■■■□□ 2.26
PSME1-205ENST00000559123 RUSC2Q8N2Y8 1516 aa29.13■■■□□ 2.25
PSME1-205ENST00000559123 ADAMTS12P58397 1594 aa29.12■■■□□ 2.25
PSME1-205ENST00000559123 CHD1O14646 1710 aa29.1■■■□□ 2.25
PSME1-205ENST00000559123 SYNJ2O15056 1496 aa29.06■■■□□ 2.24
PSME1-205ENST00000559123 CUL7Q14999 1698 aa29.05■■■□□ 2.24
PSME1-205ENST00000559123 IGF1RP08069 1367 aa29.05■■■□□ 2.24
PSME1-205ENST00000559123 FHAD1B1AJZ9 1412 aa29.03■■■□□ 2.24
PSME1-205ENST00000559123 EEA1Q15075 1411 aa29■■■□□ 2.23
PSME1-205ENST00000559123 FBLN2P98095 1184 aa28.99■■■□□ 2.23
PSME1-205ENST00000559123 CHMP7Q8WUX9 453 aaPredicted RBP28.97■■■□□ 2.23
PSME1-205ENST00000559123 GRIN2AQ12879 1464 aa28.93■■■□□ 2.22
PSME1-205ENST00000559123 CARMIL1Q5VZK9 1371 aa28.91■■■□□ 2.22
PSME1-205ENST00000559123 FAM9AQ8IZU1 332 aaPredicted RBP28.87■■■□□ 2.21
PSME1-205ENST00000559123 OSCARQ8IYS5 282 aa28.85■■■□□ 2.21
PSME1-205ENST00000559123 CSRNP3Q8WYN3 585 aa28.84■■■□□ 2.21
PSME1-205ENST00000559123 PRXQ9BXM0 1461 aa28.81■■■□□ 2.2
PSME1-205ENST00000559123 RAPGEF2Q9Y4G8 1499 aa28.81■■■□□ 2.2
PSME1-205ENST00000559123 CEP170Q5SW79 1584 aa28.79■■■□□ 2.2
PSME1-205ENST00000559123 NUP160Q12769 1436 aa28.77■■■□□ 2.2
PSME1-205ENST00000559123 CLASP1Q7Z460 1538 aa28.74■■■□□ 2.19
PSME1-205ENST00000559123 KIF21BO75037 1637 aa28.71■■■□□ 2.19
PSME1-205ENST00000559123 CTTNBP2Q8WZ74 1663 aa28.61■■■□□ 2.17
PSME1-205ENST00000559123 KIAA0586Q9BVV6 1533 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms