RNA–Protein interactions for RNA: ENST00000538094.1

LINC00612-201, long intergenic non-protein coding RNA 612, humanhuman

TSL 2 BASIC

Gene LINC00612, Length 2,213 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00612-201ENST00000538094 NISCHQ9Y2I1 1504 aa36.02■■■■□ 3.36
LINC00612-201ENST00000538094 CCDC180Q9P1Z9 1646 aa31.25■■■□□ 2.59
LINC00612-201ENST00000538094 ZCCHC6Q5VYS8 1495 aaKnown RBP30.27■■■□□ 2.44
LINC00612-201ENST00000538094 DCAF8L2P0C7V8 631 aa29.93■■■□□ 2.38
LINC00612-201ENST00000538094 ABCC9O60706 1549 aa29.74■■■□□ 2.35
LINC00612-201ENST00000538094 SHROOM4Q9ULL8 1493 aa29.74■■■□□ 2.35
LINC00612-201ENST00000538094 DCAF1Q9Y4B6 1507 aa29.65■■■□□ 2.34
LINC00612-201ENST00000538094 MYO15BQ96JP2 1530 aa29.23■■■□□ 2.27
LINC00612-201ENST00000538094 NACADO15069 1562 aa29.11■■■□□ 2.25
LINC00612-201ENST00000538094 SUPT5HO00267 1087 aaKnown RBP29.09■■■□□ 2.25
LINC00612-201ENST00000538094 SCRIBQ14160 1630 aa28.96■■■□□ 2.23
LINC00612-201ENST00000538094 RB1CC1Q8TDY2 1594 aa28.88■■■□□ 2.21
LINC00612-201ENST00000538094 UNC13AQ9UPW8 1703 aa28.4■■■□□ 2.14
LINC00612-201ENST00000538094 CHIC1Q5VXU3 224 aa28.26■■■□□ 2.11
LINC00612-201ENST00000538094 PABPN1Q86U42 306 aaKnown RBP eCLIP28.13■■■□□ 2.09
LINC00612-201ENST00000538094 BICRAQ9NZM4 1560 aa28.11■■■□□ 2.09
LINC00612-201ENST00000538094 CECR2Q9BXF3 1484 aa28.11■■■□□ 2.09
LINC00612-201ENST00000538094 RSF1Q96T23 1441 aaPredicted RBP28.03■■■□□ 2.08
LINC00612-201ENST00000538094 MROH2BQ7Z745 1585 aa27.91■■■□□ 2.06
LINC00612-201ENST00000538094 BAZ1AQ9NRL2 1556 aaPredicted RBP27.76■■■□□ 2.04
LINC00612-201ENST00000538094 WIZO95785 1651 aa27.69■■■□□ 2.02
LINC00612-201ENST00000538094 SMARCA4P51532 1647 aa27.68■■■□□ 2.02
LINC00612-201ENST00000538094 LOC105371045A0A1W2PR82 267 aa27.39■■□□□ 1.97
LINC00612-201ENST00000538094 TOP2AP11388 1531 aaKnown RBP27.3■■□□□ 1.96
LINC00612-201ENST00000538094 PEG3Q9GZU2 1588 aa27.26■■□□□ 1.95
LINC00612-201ENST00000538094 EIF4G1Q04637 1599 aaKnown RBP27.24■■□□□ 1.95
LINC00612-201ENST00000538094 ATAD2BQ9ULI0 1458 aa27.22■■□□□ 1.95
LINC00612-201ENST00000538094 PCGF6Q9BYE7 350 aa27.16■■□□□ 1.94
LINC00612-201ENST00000538094 TRIM41Q8WV44 630 aa27.14■■□□□ 1.94
LINC00612-201ENST00000538094 SMARCA2P51531 1590 aa27.12■■□□□ 1.93
LINC00612-201ENST00000538094 CCDC88BA6NC98 1476 aa27.1■■□□□ 1.93
LINC00612-201ENST00000538094 BAZ1BQ9UIG0 1483 aaKnown RBP27.07■■□□□ 1.92
LINC00612-201ENST00000538094 HRCP23327 699 aa27.06■■□□□ 1.92
LINC00612-201ENST00000538094 NCAPD3P42695 1498 aa26.92■■□□□ 1.9
LINC00612-201ENST00000538094 FAM9AQ8IZU1 332 aaPredicted RBP26.87■■□□□ 1.89
LINC00612-201ENST00000538094 HMGXB3Q12766 1538 aa26.86■■□□□ 1.89
LINC00612-201ENST00000538094 CC2D2AQ9P2K1 1620 aa26.84■■□□□ 1.89
LINC00612-201ENST00000538094 TRIM26Q12899 539 aaPredicted RBP26.72■■□□□ 1.87
LINC00612-201ENST00000538094 ABCC8Q09428 1581 aa26.64■■□□□ 1.85
LINC00612-201ENST00000538094 EHMT2Q96KQ7 1210 aa26.6■■□□□ 1.85
LINC00612-201ENST00000538094 PPARGC1BQ86YN6 1023 aaKnown RBP26.5■■□□□ 1.83
LINC00612-201ENST00000538094 DNAJC5BQ9UF47 199 aa26.38■■□□□ 1.81
LINC00612-201ENST00000538094 CFTRP13569 1480 aa26.38■■□□□ 1.81
LINC00612-201ENST00000538094 WRNQ14191 1432 aaPredicted RBP eCLIP26.35■■□□□ 1.81
LINC00612-201ENST00000538094 SYNJ1O43426 1573 aa26.29■■□□□ 1.8
LINC00612-201ENST00000538094 CADPSQ9ULU8 1353 aa26.28■■□□□ 1.8
LINC00612-201ENST00000538094 SOGA1O94964 1423 aa26.18■■□□□ 1.78
LINC00612-201ENST00000538094 NESP48681 1621 aa26.16■■□□□ 1.78
LINC00612-201ENST00000538094 PRDM2Q13029 1718 aa26.16■■□□□ 1.78
LINC00612-201ENST00000538094 TOP2BQ02880 1626 aa26.09■■□□□ 1.77
LINC00612-201ENST00000538094 CUX1P39880 1505 aa26.08■■□□□ 1.77
LINC00612-201ENST00000538094 RUSC2Q8N2Y8 1516 aa26.07■■□□□ 1.76
LINC00612-201ENST00000538094 ZEB1P37275 1124 aaPredicted RBP26.05■■□□□ 1.76
LINC00612-201ENST00000538094 EEA1Q15075 1411 aa26.04■■□□□ 1.76
LINC00612-201ENST00000538094 BIVM-ERCC5R4GMW8 1640 aa26.04■■□□□ 1.76
LINC00612-201ENST00000538094 CSRNP3Q8WYN3 585 aa26.02■■□□□ 1.76
LINC00612-201ENST00000538094 FANCD2Q9BXW9 1451 aa26.02■■□□□ 1.76
LINC00612-201ENST00000538094 CEP162Q5TB80 1403 aa25.97■■□□□ 1.75
LINC00612-201ENST00000538094 TNIKQ9UKE5 1360 aa25.97■■□□□ 1.75
LINC00612-201ENST00000538094 LAMC3Q9Y6N6 1575 aa25.97■■□□□ 1.75
LINC00612-201ENST00000538094 UBTFP17480 764 aaKnown RBP25.87■■□□□ 1.73
LINC00612-201ENST00000538094 GOLGA3Q08378 1498 aa25.84■■□□□ 1.73
LINC00612-201ENST00000538094 CEP164Q9UPV0 1460 aa25.82■■□□□ 1.72
LINC00612-201ENST00000538094 PDS5BQ9NTI5 1447 aa25.78■■□□□ 1.72
LINC00612-201ENST00000538094 FGD5Q6ZNL6 1462 aa25.77■■□□□ 1.72
LINC00612-201ENST00000538094 KIF21AQ7Z4S6 1674 aa25.76■■□□□ 1.71
LINC00612-201ENST00000538094 TOPBP1Q92547 1522 aa25.74■■□□□ 1.71
LINC00612-201ENST00000538094 DNMBPQ6XZF7 1577 aa25.74■■□□□ 1.71
LINC00612-201ENST00000538094 URB2Q14146 1524 aaKnown RBP25.72■■□□□ 1.71
LINC00612-201ENST00000538094 TTBK1Q5TCY1 1321 aaPredicted RBP25.7■■□□□ 1.7
LINC00612-201ENST00000538094 KIF21BO75037 1637 aa25.7■■□□□ 1.7
LINC00612-201ENST00000538094 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.66■■□□□ 1.7
LINC00612-201ENST00000538094 KIF27Q86VH2 1401 aa25.64■■□□□ 1.7
LINC00612-201ENST00000538094 POLA1P09884 1462 aaPredicted RBP25.64■■□□□ 1.69
LINC00612-201ENST00000538094 CUX2O14529 1486 aa25.62■■□□□ 1.69
LINC00612-201ENST00000538094 RAD54L2Q9Y4B4 1467 aa25.62■■□□□ 1.69
LINC00612-201ENST00000538094 RAPGEF2Q9Y4G8 1499 aa25.58■■□□□ 1.69
LINC00612-201ENST00000538094 CCER1Q8TC90 406 aaPredicted RBP25.57■■□□□ 1.68
LINC00612-201ENST00000538094 CLIP1P30622 1438 aa25.53■■□□□ 1.68
LINC00612-201ENST00000538094 PRXQ9BXM0 1461 aa25.5■■□□□ 1.67
LINC00612-201ENST00000538094 MRC2Q9UBG0 1479 aa25.48■■□□□ 1.67
LINC00612-201ENST00000538094 ABCA10Q8WWZ4 1543 aa25.48■■□□□ 1.67
LINC00612-201ENST00000538094 IGF1RP08069 1367 aa25.46■■□□□ 1.67
LINC00612-201ENST00000538094 ERCC6Q03468 1493 aa25.43■■□□□ 1.66
LINC00612-201ENST00000538094 VPS8Q8N3P4 1428 aa25.41■■□□□ 1.66
LINC00612-201ENST00000538094 ERICH3Q5RHP9 1530 aa25.4■■□□□ 1.66
LINC00612-201ENST00000538094 WDR97A6NE52 1622 aa25.39■■□□□ 1.66
LINC00612-201ENST00000538094 TDRD9Q8NDG6 1382 aaKnown RBP25.37■■□□□ 1.65
LINC00612-201ENST00000538094 RANGAP1P46060 587 aaPredicted RBP25.35■■□□□ 1.65
LINC00612-201ENST00000538094 TARBP1Q13395 1621 aaKnown RBP25.34■■□□□ 1.65
LINC00612-201ENST00000538094 WDR62O43379 1518 aa25.33■■□□□ 1.65
LINC00612-201ENST00000538094 CARMIL1Q5VZK9 1371 aa25.32■■□□□ 1.64
LINC00612-201ENST00000538094 ABCA5Q8WWZ7 1642 aa25.28■■□□□ 1.64
LINC00612-201ENST00000538094 THOC2Q8NI27 1593 aaKnown RBP25.28■■□□□ 1.64
LINC00612-201ENST00000538094 GAPVD1Q14C86 1478 aa25.25■■□□□ 1.63
LINC00612-201ENST00000538094 APLP2Q06481 763 aa25.24■■□□□ 1.63
LINC00612-201ENST00000538094 AQRO60306 1485 aaKnown RBP eCLIP25.19■■□□□ 1.62
LINC00612-201ENST00000538094 HNRNPUL2Q1KMD3 747 aaKnown RBP25.17■■□□□ 1.62
LINC00612-201ENST00000538094 ZNF608Q9ULD9 1512 aaPredicted RBP25.17■■□□□ 1.62
LINC00612-201ENST00000538094 ARAP1Q96P48 1450 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms