RNA–Protein interactions for RNA: ENST00000622527.1

PCDHGB2-202, Transcript of protocadherin gamma subfamily B, 2, humanhuman

APPRIS P1 BASIC

Gene PCDHGB2, Length 2,588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB2-202ENST00000622527 NISCHQ9Y2I1 1504 aa32.43■■■□□ 2.78
PCDHGB2-202ENST00000622527 SHROOM4Q9ULL8 1493 aa28.04■■■□□ 2.08
PCDHGB2-202ENST00000622527 SUPT5HO00267 1087 aaKnown RBP27.58■■■□□ 2.01
PCDHGB2-202ENST00000622527 ZCCHC6Q5VYS8 1495 aaKnown RBP27.49■■□□□ 1.99
PCDHGB2-202ENST00000622527 CCDC180Q9P1Z9 1646 aa27.37■■□□□ 1.97
PCDHGB2-202ENST00000622527 DCAF8L2P0C7V8 631 aa26.99■■□□□ 1.91
PCDHGB2-202ENST00000622527 MYO15BQ96JP2 1530 aa26.93■■□□□ 1.9
PCDHGB2-202ENST00000622527 CHIC1Q5VXU3 224 aa26.87■■□□□ 1.89
PCDHGB2-202ENST00000622527 DCAF1Q9Y4B6 1507 aa26.5■■□□□ 1.83
PCDHGB2-202ENST00000622527 HRCP23327 699 aa26.47■■□□□ 1.83
PCDHGB2-202ENST00000622527 PCGF6Q9BYE7 350 aa26.37■■□□□ 1.81
PCDHGB2-202ENST00000622527 LOC105371045A0A1W2PR82 267 aa26.18■■□□□ 1.78
PCDHGB2-202ENST00000622527 PPARGC1BQ86YN6 1023 aaKnown RBP26.03■■□□□ 1.76
PCDHGB2-202ENST00000622527 ABCC9O60706 1549 aa26■■□□□ 1.75
PCDHGB2-202ENST00000622527 SCRIBQ14160 1630 aa25.87■■□□□ 1.73
PCDHGB2-202ENST00000622527 RSF1Q96T23 1441 aaPredicted RBP25.81■■□□□ 1.72
PCDHGB2-202ENST00000622527 TRIM26Q12899 539 aaPredicted RBP25.69■■□□□ 1.7
PCDHGB2-202ENST00000622527 RB1CC1Q8TDY2 1594 aa25.64■■□□□ 1.7
PCDHGB2-202ENST00000622527 TRIM41Q8WV44 630 aa25.59■■□□□ 1.69
PCDHGB2-202ENST00000622527 FAM9AQ8IZU1 332 aaPredicted RBP25.51■■□□□ 1.67
PCDHGB2-202ENST00000622527 EHMT2Q96KQ7 1210 aa25.38■■□□□ 1.65
PCDHGB2-202ENST00000622527 CECR2Q9BXF3 1484 aa25.38■■□□□ 1.65
PCDHGB2-202ENST00000622527 MROH2BQ7Z745 1585 aa25.3■■□□□ 1.64
PCDHGB2-202ENST00000622527 NACADO15069 1562 aa25.25■■□□□ 1.63
PCDHGB2-202ENST00000622527 WIZO95785 1651 aa25.2■■□□□ 1.62
PCDHGB2-202ENST00000622527 ZEB1P37275 1124 aaPredicted RBP25.15■■□□□ 1.62
PCDHGB2-202ENST00000622527 BAZ1AQ9NRL2 1556 aaPredicted RBP24.98■■□□□ 1.59
PCDHGB2-202ENST00000622527 EIF4G1Q04637 1599 aaKnown RBP24.92■■□□□ 1.58
PCDHGB2-202ENST00000622527 ABCC8Q09428 1581 aa24.76■■□□□ 1.55
PCDHGB2-202ENST00000622527 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.74■■□□□ 1.55
PCDHGB2-202ENST00000622527 TOP2AP11388 1531 aaKnown RBP24.71■■□□□ 1.55
PCDHGB2-202ENST00000622527 CCDC88BA6NC98 1476 aa24.7■■□□□ 1.54
PCDHGB2-202ENST00000622527 SMARCA4P51532 1647 aa24.66■■□□□ 1.54
PCDHGB2-202ENST00000622527 CCER1Q8TC90 406 aaPredicted RBP24.63■■□□□ 1.53
PCDHGB2-202ENST00000622527 SMARCA2P51531 1590 aa24.63■■□□□ 1.53
PCDHGB2-202ENST00000622527 TTBK1Q5TCY1 1321 aaPredicted RBP24.62■■□□□ 1.53
PCDHGB2-202ENST00000622527 SCAF1Q9H7N4 1312 aaKnown RBP24.62■■□□□ 1.53
PCDHGB2-202ENST00000622527 UNC13AQ9UPW8 1703 aa24.58■■□□□ 1.52
PCDHGB2-202ENST00000622527 SOGA1O94964 1423 aa24.57■■□□□ 1.52
PCDHGB2-202ENST00000622527 CEP162Q5TB80 1403 aa24.53■■□□□ 1.52
PCDHGB2-202ENST00000622527 WRNQ14191 1432 aaPredicted RBP eCLIP24.49■■□□□ 1.51
PCDHGB2-202ENST00000622527 RUSC2Q8N2Y8 1516 aa24.46■■□□□ 1.51
PCDHGB2-202ENST00000622527 TNIKQ9UKE5 1360 aa24.41■■□□□ 1.5
PCDHGB2-202ENST00000622527 CSRNP3Q8WYN3 585 aa24.37■■□□□ 1.49
PCDHGB2-202ENST00000622527 UBTFP17480 764 aaKnown RBP24.36■■□□□ 1.49
PCDHGB2-202ENST00000622527 PABPN1Q86U42 306 aaKnown RBP eCLIP24.34■■□□□ 1.49
PCDHGB2-202ENST00000622527 EEA1Q15075 1411 aa24.3■■□□□ 1.48
PCDHGB2-202ENST00000622527 BICRAQ9NZM4 1560 aa24.27■■□□□ 1.48
PCDHGB2-202ENST00000622527 DIEXFQ68CQ4 756 aaKnown RBP24.27■■□□□ 1.48
PCDHGB2-202ENST00000622527 NEUROD1Q13562 356 aa24.25■■□□□ 1.47
PCDHGB2-202ENST00000622527 GOLGA3Q08378 1498 aa24.24■■□□□ 1.47
PCDHGB2-202ENST00000622527 ACIN1Q9UKV3 1341 aaKnown RBP24.23■■□□□ 1.47
PCDHGB2-202ENST00000622527 PELP1Q8IZL8 1130 aaKnown RBP24.18■■□□□ 1.46
PCDHGB2-202ENST00000622527 SYNJ1O43426 1573 aa24.15■■□□□ 1.46
PCDHGB2-202ENST00000622527 PEG3Q9GZU2 1588 aa24.11■■□□□ 1.45
PCDHGB2-202ENST00000622527 CEP164Q9UPV0 1460 aa24.06■■□□□ 1.44
PCDHGB2-202ENST00000622527 KIF21BO75037 1637 aa24.02■■□□□ 1.44
PCDHGB2-202ENST00000622527 HNRNPUL2Q1KMD3 747 aaKnown RBP24.02■■□□□ 1.44
PCDHGB2-202ENST00000622527 GTF3C3Q9Y5Q9 886 aa24.01■■□□□ 1.43
PCDHGB2-202ENST00000622527 CLIP1P30622 1438 aa24■■□□□ 1.43
PCDHGB2-202ENST00000622527 CENPBP07199 599 aaPredicted RBP23.99■■□□□ 1.43
PCDHGB2-202ENST00000622527 ZNF316A6NFI3 1004 aaPredicted RBP23.99■■□□□ 1.43
PCDHGB2-202ENST00000622527 ATAD2BQ9ULI0 1458 aa23.97■■□□□ 1.43
PCDHGB2-202ENST00000622527 RAPGEF2Q9Y4G8 1499 aa23.94■■□□□ 1.42
PCDHGB2-202ENST00000622527 RANGAP1P46060 587 aaPredicted RBP23.94■■□□□ 1.42
PCDHGB2-202ENST00000622527 BAZ1BQ9UIG0 1483 aaKnown RBP23.92■■□□□ 1.42
PCDHGB2-202ENST00000622527 VPS8Q8N3P4 1428 aa23.91■■□□□ 1.42
PCDHGB2-202ENST00000622527 YTHDC1Q96MU7 727 aaKnown RBP23.82■■□□□ 1.4
PCDHGB2-202ENST00000622527 APLP2Q06481 763 aa23.8■■□□□ 1.4
PCDHGB2-202ENST00000622527 MIER1Q8N108 512 aa23.76■■□□□ 1.39
PCDHGB2-202ENST00000622527 TOP2BQ02880 1626 aa23.75■■□□□ 1.39
PCDHGB2-202ENST00000622527 BIVM-ERCC5R4GMW8 1640 aa23.65■■□□□ 1.38
PCDHGB2-202ENST00000622527 ARAP1Q96P48 1450 aa23.6■■□□□ 1.37
PCDHGB2-202ENST00000622527 PRXQ9BXM0 1461 aa23.6■■□□□ 1.37
PCDHGB2-202ENST00000622527 ERICH3Q5RHP9 1530 aa23.58■■□□□ 1.36
PCDHGB2-202ENST00000622527 KANK4Q5T7N3 995 aaPredicted RBP23.57■■□□□ 1.36
PCDHGB2-202ENST00000622527 DHX57Q6P158 1386 aaKnown RBP23.53■■□□□ 1.36
PCDHGB2-202ENST00000622527 CUX1P39880 1505 aa23.52■■□□□ 1.36
PCDHGB2-202ENST00000622527 KIF27Q86VH2 1401 aa23.42■■□□□ 1.34
PCDHGB2-202ENST00000622527 CLSPNQ9HAW4 1339 aa23.41■■□□□ 1.34
PCDHGB2-202ENST00000622527 HMGXB3Q12766 1538 aa23.41■■□□□ 1.34
PCDHGB2-202ENST00000622527 NCAPD3P42695 1498 aa23.4■■□□□ 1.34
PCDHGB2-202ENST00000622527 RRBP1Q9P2E9 1410 aaKnown RBP23.38■■□□□ 1.33
PCDHGB2-202ENST00000622527 ARHGAP35Q9NRY4 1499 aa23.36■■□□□ 1.33
PCDHGB2-202ENST00000622527 CFTRP13569 1480 aa23.32■■□□□ 1.32
PCDHGB2-202ENST00000622527 ITGAEP38570 1179 aa23.32■■□□□ 1.32
PCDHGB2-202ENST00000622527 CCNB3Q8WWL7 1395 aa23.3■■□□□ 1.32
PCDHGB2-202ENST00000622527 CUX2O14529 1486 aa23.25■■□□□ 1.31
PCDHGB2-202ENST00000622527 IGF1RP08069 1367 aa23.18■■□□□ 1.3
PCDHGB2-202ENST00000622527 RAB3GAP2Q9H2M9 1393 aa23.15■■□□□ 1.3
PCDHGB2-202ENST00000622527 TIAM1Q13009 1591 aa23.12■■□□□ 1.29
PCDHGB2-202ENST00000622527 PRDM2Q13029 1718 aa23.12■■□□□ 1.29
PCDHGB2-202ENST00000622527 MAPKBP1O60336 1514 aa23.11■■□□□ 1.29
PCDHGB2-202ENST00000622527 CC2D2AQ9P2K1 1620 aa23.11■■□□□ 1.29
PCDHGB2-202ENST00000622527 CARMIL1Q5VZK9 1371 aa23.08■■□□□ 1.28
PCDHGB2-202ENST00000622527 SUPT16HQ9Y5B9 1047 aaKnown RBP23.06■■□□□ 1.28
PCDHGB2-202ENST00000622527 FGD5Q6ZNL6 1462 aa23.06■■□□□ 1.28
PCDHGB2-202ENST00000622527 PHLDB1Q86UU1 1377 aa23.05■■□□□ 1.28
PCDHGB2-202ENST00000622527 LRRC9Q6ZRR7 1453 aa23.04■■□□□ 1.28
PCDHGB2-202ENST00000622527 KCNH8Q96L42 1107 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms