Protein–RNA interactions for Protein: A5X5Y0

HTR3E, 5-hydroxytryptamine receptor 3E, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3EA5X5Y0 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
HTR3EA5X5Y0 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.53■■■□□ 2.48
HTR3EA5X5Y0 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
HTR3EA5X5Y0 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
HTR3EA5X5Y0 AL356512.1-201ENST00000607453 1739 ntBASIC29.93■■■□□ 2.38
HTR3EA5X5Y0 HES6-203ENST00000409160 1600 ntTSL 2 BASIC29.93■■■□□ 2.38
HTR3EA5X5Y0 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC29.82■■■□□ 2.36
HTR3EA5X5Y0 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC29.77■■■□□ 2.36
HTR3EA5X5Y0 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC29.52■■■□□ 2.32
HTR3EA5X5Y0 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
HTR3EA5X5Y0 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
HTR3EA5X5Y0 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.33■■■□□ 2.29
HTR3EA5X5Y0 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC29.25■■■□□ 2.27
HTR3EA5X5Y0 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
HTR3EA5X5Y0 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
HTR3EA5X5Y0 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
HTR3EA5X5Y0 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC29.06■■■□□ 2.24
HTR3EA5X5Y0 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC28.83■■■□□ 2.21
HTR3EA5X5Y0 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC28.75■■■□□ 2.19
HTR3EA5X5Y0 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
HTR3EA5X5Y0 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC28.56■■■□□ 2.16
HTR3EA5X5Y0 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC28.53■■■□□ 2.16
HTR3EA5X5Y0 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC28.52■■■□□ 2.16
HTR3EA5X5Y0 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
HTR3EA5X5Y0 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC28.48■■■□□ 2.15
HTR3EA5X5Y0 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
HTR3EA5X5Y0 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
HTR3EA5X5Y0 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
HTR3EA5X5Y0 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
HTR3EA5X5Y0 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
HTR3EA5X5Y0 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC28.02■■■□□ 2.08
HTR3EA5X5Y0 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28■■■□□ 2.07
HTR3EA5X5Y0 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
HTR3EA5X5Y0 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC27.93■■■□□ 2.06
HTR3EA5X5Y0 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
HTR3EA5X5Y0 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC27.86■■■□□ 2.05
HTR3EA5X5Y0 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.85■■■□□ 2.05
HTR3EA5X5Y0 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC27.84■■■□□ 2.05
HTR3EA5X5Y0 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
HTR3EA5X5Y0 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
HTR3EA5X5Y0 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
HTR3EA5X5Y0 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC27.66■■■□□ 2.02
HTR3EA5X5Y0 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC27.65■■■□□ 2.02
HTR3EA5X5Y0 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
HTR3EA5X5Y0 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
HTR3EA5X5Y0 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC27.6■■■□□ 2.01
HTR3EA5X5Y0 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
HTR3EA5X5Y0 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
HTR3EA5X5Y0 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC27.36■■□□□ 1.97
HTR3EA5X5Y0 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
HTR3EA5X5Y0 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
HTR3EA5X5Y0 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
HTR3EA5X5Y0 ILK-212ENST00000532063 1617 ntTSL 2 BASIC27.23■■□□□ 1.95
HTR3EA5X5Y0 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
HTR3EA5X5Y0 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC27.23■■□□□ 1.95
HTR3EA5X5Y0 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
HTR3EA5X5Y0 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
HTR3EA5X5Y0 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
HTR3EA5X5Y0 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
HTR3EA5X5Y0 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC27.16■■□□□ 1.94
HTR3EA5X5Y0 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
HTR3EA5X5Y0 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
HTR3EA5X5Y0 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
HTR3EA5X5Y0 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
HTR3EA5X5Y0 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
HTR3EA5X5Y0 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
HTR3EA5X5Y0 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC27.01■■□□□ 1.91
HTR3EA5X5Y0 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC27■■□□□ 1.91
HTR3EA5X5Y0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
HTR3EA5X5Y0 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
HTR3EA5X5Y0 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
HTR3EA5X5Y0 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
HTR3EA5X5Y0 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
HTR3EA5X5Y0 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.82■■□□□ 1.88
HTR3EA5X5Y0 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
HTR3EA5X5Y0 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
HTR3EA5X5Y0 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
HTR3EA5X5Y0 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
HTR3EA5X5Y0 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.72■■□□□ 1.87
HTR3EA5X5Y0 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
HTR3EA5X5Y0 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
HTR3EA5X5Y0 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
HTR3EA5X5Y0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.69■■□□□ 1.86
HTR3EA5X5Y0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.69■■□□□ 1.86
HTR3EA5X5Y0 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
HTR3EA5X5Y0 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.64■■□□□ 1.86
HTR3EA5X5Y0 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
HTR3EA5X5Y0 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
HTR3EA5X5Y0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
HTR3EA5X5Y0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
HTR3EA5X5Y0 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
HTR3EA5X5Y0 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.57■■□□□ 1.84
HTR3EA5X5Y0 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
HTR3EA5X5Y0 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
HTR3EA5X5Y0 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC26.55■■□□□ 1.84
HTR3EA5X5Y0 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
HTR3EA5X5Y0 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
HTR3EA5X5Y0 AL161658.1-201ENST00000623641 1967 ntBASIC26.51■■□□□ 1.83
HTR3EA5X5Y0 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
HTR3EA5X5Y0 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms