RNA–Protein interactions for RNA: ENST00000341640.6

PAX4-202, Transcript of paired box 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PAX4, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4-202ENST00000341640 NISCHQ9Y2I1 1504 aa37.7■■■■□ 3.63
PAX4-202ENST00000341640 CCDC180Q9P1Z9 1646 aa32.64■■■□□ 2.82
PAX4-202ENST00000341640 ZCCHC6Q5VYS8 1495 aaKnown RBP31.79■■■□□ 2.68
PAX4-202ENST00000341640 SHROOM4Q9ULL8 1493 aa31.18■■■□□ 2.58
PAX4-202ENST00000341640 DCAF1Q9Y4B6 1507 aa31.11■■■□□ 2.57
PAX4-202ENST00000341640 DCAF8L2P0C7V8 631 aa30.95■■■□□ 2.55
PAX4-202ENST00000341640 MYO15BQ96JP2 1530 aa30.53■■■□□ 2.48
PAX4-202ENST00000341640 ABCC9O60706 1549 aa30.52■■■□□ 2.48
PAX4-202ENST00000341640 NACADO15069 1562 aa30.24■■■□□ 2.43
PAX4-202ENST00000341640 SCRIBQ14160 1630 aa30.19■■■□□ 2.42
PAX4-202ENST00000341640 SUPT5HO00267 1087 aaKnown RBP30.15■■■□□ 2.42
PAX4-202ENST00000341640 RB1CC1Q8TDY2 1594 aa29.89■■■□□ 2.38
PAX4-202ENST00000341640 UNC13AQ9UPW8 1703 aa29.52■■■□□ 2.32
PAX4-202ENST00000341640 RSF1Q96T23 1441 aaPredicted RBP29.44■■■□□ 2.3
PAX4-202ENST00000341640 CECR2Q9BXF3 1484 aa29.34■■■□□ 2.29
PAX4-202ENST00000341640 MROH2BQ7Z745 1585 aa29.22■■■□□ 2.27
PAX4-202ENST00000341640 BICRAQ9NZM4 1560 aa29.12■■■□□ 2.25
PAX4-202ENST00000341640 CHIC1Q5VXU3 224 aa29.1■■■□□ 2.25
PAX4-202ENST00000341640 BAZ1AQ9NRL2 1556 aaPredicted RBP29.04■■■□□ 2.24
PAX4-202ENST00000341640 WIZO95785 1651 aa29.04■■■□□ 2.24
PAX4-202ENST00000341640 SMARCA4P51532 1647 aa28.92■■■□□ 2.22
PAX4-202ENST00000341640 PABPN1Q86U42 306 aaKnown RBP eCLIP28.86■■■□□ 2.21
PAX4-202ENST00000341640 TOP2AP11388 1531 aaKnown RBP28.65■■■□□ 2.18
PAX4-202ENST00000341640 PEG3Q9GZU2 1588 aa28.51■■■□□ 2.15
PAX4-202ENST00000341640 EIF4G1Q04637 1599 aaKnown RBP28.48■■■□□ 2.15
PAX4-202ENST00000341640 SMARCA2P51531 1590 aa28.45■■■□□ 2.15
PAX4-202ENST00000341640 CCDC88BA6NC98 1476 aa28.38■■■□□ 2.13
PAX4-202ENST00000341640 ATAD2BQ9ULI0 1458 aa28.29■■■□□ 2.12
PAX4-202ENST00000341640 TRIM41Q8WV44 630 aa28.23■■■□□ 2.11
PAX4-202ENST00000341640 BAZ1BQ9UIG0 1483 aaKnown RBP28.14■■■□□ 2.09
PAX4-202ENST00000341640 LOC105371045A0A1W2PR82 267 aa28.06■■■□□ 2.08
PAX4-202ENST00000341640 ABCC8Q09428 1581 aa28.03■■■□□ 2.08
PAX4-202ENST00000341640 HMGXB3Q12766 1538 aa27.95■■■□□ 2.07
PAX4-202ENST00000341640 NCAPD3P42695 1498 aa27.92■■■□□ 2.06
PAX4-202ENST00000341640 FAM9AQ8IZU1 332 aaPredicted RBP27.83■■■□□ 2.05
PAX4-202ENST00000341640 WRNQ14191 1432 aaPredicted RBP eCLIP27.66■■■□□ 2.02
PAX4-202ENST00000341640 SYNJ1O43426 1573 aa27.65■■■□□ 2.02
PAX4-202ENST00000341640 CC2D2AQ9P2K1 1620 aa27.64■■■□□ 2.01
PAX4-202ENST00000341640 SOGA1O94964 1423 aa27.55■■■□□ 2
PAX4-202ENST00000341640 EHMT2Q96KQ7 1210 aa27.49■■□□□ 1.99
PAX4-202ENST00000341640 RUSC2Q8N2Y8 1516 aa27.47■■□□□ 1.99
PAX4-202ENST00000341640 CFTRP13569 1480 aa27.46■■□□□ 1.99
PAX4-202ENST00000341640 PRDM2Q13029 1718 aa27.43■■□□□ 1.98
PAX4-202ENST00000341640 TOP2BQ02880 1626 aa27.43■■□□□ 1.98
PAX4-202ENST00000341640 BIVM-ERCC5R4GMW8 1640 aa27.41■■□□□ 1.98
PAX4-202ENST00000341640 EEA1Q15075 1411 aa27.41■■□□□ 1.98
PAX4-202ENST00000341640 CUX1P39880 1505 aa27.28■■□□□ 1.96
PAX4-202ENST00000341640 CSRNP3Q8WYN3 585 aa27.26■■□□□ 1.95
PAX4-202ENST00000341640 CADPSQ9ULU8 1353 aa27.23■■□□□ 1.95
PAX4-202ENST00000341640 PCGF6Q9BYE7 350 aa27.21■■□□□ 1.95
PAX4-202ENST00000341640 KIF21BO75037 1637 aa27.16■■□□□ 1.94
PAX4-202ENST00000341640 GOLGA3Q08378 1498 aa27.14■■□□□ 1.93
PAX4-202ENST00000341640 TNIKQ9UKE5 1360 aa27.12■■□□□ 1.93
PAX4-202ENST00000341640 CEP164Q9UPV0 1460 aa27.08■■□□□ 1.93
PAX4-202ENST00000341640 CEP162Q5TB80 1403 aa27.08■■□□□ 1.93
PAX4-202ENST00000341640 TRIM26Q12899 539 aaPredicted RBP27■■□□□ 1.91
PAX4-202ENST00000341640 NESP48681 1621 aa27■■□□□ 1.91
PAX4-202ENST00000341640 FANCD2Q9BXW9 1451 aa26.98■■□□□ 1.91
PAX4-202ENST00000341640 RAPGEF2Q9Y4G8 1499 aa26.96■■□□□ 1.91
PAX4-202ENST00000341640 UBTFP17480 764 aaKnown RBP26.95■■□□□ 1.91
PAX4-202ENST00000341640 LAMC3Q9Y6N6 1575 aa26.91■■□□□ 1.9
PAX4-202ENST00000341640 DNAJC5BQ9UF47 199 aa26.9■■□□□ 1.9
PAX4-202ENST00000341640 FGD5Q6ZNL6 1462 aa26.88■■□□□ 1.89
PAX4-202ENST00000341640 PRXQ9BXM0 1461 aa26.88■■□□□ 1.89
PAX4-202ENST00000341640 KIF27Q86VH2 1401 aa26.87■■□□□ 1.89
PAX4-202ENST00000341640 ERICH3Q5RHP9 1530 aa26.86■■□□□ 1.89
PAX4-202ENST00000341640 DNMBPQ6XZF7 1577 aa26.83■■□□□ 1.89
PAX4-202ENST00000341640 HRCP23327 699 aa26.78■■□□□ 1.88
PAX4-202ENST00000341640 TOPBP1Q92547 1522 aa26.76■■□□□ 1.87
PAX4-202ENST00000341640 CUX2O14529 1486 aa26.76■■□□□ 1.87
PAX4-202ENST00000341640 PPARGC1BQ86YN6 1023 aaKnown RBP26.73■■□□□ 1.87
PAX4-202ENST00000341640 CLIP1P30622 1438 aa26.73■■□□□ 1.87
PAX4-202ENST00000341640 KIF21AQ7Z4S6 1674 aa26.7■■□□□ 1.86
PAX4-202ENST00000341640 POLA1P09884 1462 aaPredicted RBP26.68■■□□□ 1.86
PAX4-202ENST00000341640 URB2Q14146 1524 aaKnown RBP26.68■■□□□ 1.86
PAX4-202ENST00000341640 RAD54L2Q9Y4B4 1467 aa26.63■■□□□ 1.85
PAX4-202ENST00000341640 IGF1RP08069 1367 aa26.63■■□□□ 1.85
PAX4-202ENST00000341640 PDS5BQ9NTI5 1447 aa26.62■■□□□ 1.85
PAX4-202ENST00000341640 ABCA10Q8WWZ4 1543 aa26.61■■□□□ 1.85
PAX4-202ENST00000341640 WDR97A6NE52 1622 aa26.59■■□□□ 1.85
PAX4-202ENST00000341640 VPS8Q8N3P4 1428 aa26.57■■□□□ 1.84
PAX4-202ENST00000341640 ARAP1Q96P48 1450 aa26.49■■□□□ 1.83
PAX4-202ENST00000341640 RANGAP1P46060 587 aaPredicted RBP26.48■■□□□ 1.83
PAX4-202ENST00000341640 CARMIL1Q5VZK9 1371 aa26.48■■□□□ 1.83
PAX4-202ENST00000341640 TTBK1Q5TCY1 1321 aaPredicted RBP26.43■■□□□ 1.82
PAX4-202ENST00000341640 ABCA5Q8WWZ7 1642 aa26.43■■□□□ 1.82
PAX4-202ENST00000341640 CUL7Q14999 1698 aa26.4■■□□□ 1.82
PAX4-202ENST00000341640 ARHGAP35Q9NRY4 1499 aa26.38■■□□□ 1.81
PAX4-202ENST00000341640 TARBP1Q13395 1621 aaKnown RBP26.37■■□□□ 1.81
PAX4-202ENST00000341640 MRC2Q9UBG0 1479 aa26.32■■□□□ 1.8
PAX4-202ENST00000341640 TDRD9Q8NDG6 1382 aaKnown RBP26.28■■□□□ 1.8
PAX4-202ENST00000341640 GAPVD1Q14C86 1478 aa26.27■■□□□ 1.8
PAX4-202ENST00000341640 CTTNBP2Q8WZ74 1663 aa26.24■■□□□ 1.79
PAX4-202ENST00000341640 WDR62O43379 1518 aa26.2■■□□□ 1.79
PAX4-202ENST00000341640 PBRM1Q86U86 1689 aa26.19■■□□□ 1.78
PAX4-202ENST00000341640 APLP2Q06481 763 aa26.16■■□□□ 1.78
PAX4-202ENST00000341640 THOC2Q8NI27 1593 aaKnown RBP26.09■■□□□ 1.77
PAX4-202ENST00000341640 EFCAB5A4FU69 1503 aa26.07■■□□□ 1.76
PAX4-202ENST00000341640 AQRO60306 1485 aaKnown RBP eCLIP26.06■■□□□ 1.76
PAX4-202ENST00000341640 ZEB1P37275 1124 aaPredicted RBP26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms