RNA–Protein interactions for RNA: ENST00000546208.5

ACTN2-207, Transcript of actinin alpha 2, humanhuman

TSL 1 (best) BASIC

Gene ACTN2, Length 5,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN2-207ENST00000546208 DCAF8L2P0C7V8 631 aa28.87■■■□□ 2.21
ACTN2-207ENST00000546208 NISCHQ9Y2I1 1504 aa28.01■■■□□ 2.07
ACTN2-207ENST00000546208 SUPT5HO00267 1087 aaKnown RBP27.25■■□□□ 1.95
ACTN2-207ENST00000546208 SHROOM4Q9ULL8 1493 aa26.9■■□□□ 1.9
ACTN2-207ENST00000546208 EHMT2Q96KQ7 1210 aa26.22■■□□□ 1.79
ACTN2-207ENST00000546208 APLP2Q06481 763 aa25.75■■□□□ 1.71
ACTN2-207ENST00000546208 FAM9AQ8IZU1 332 aaPredicted RBP25.67■■□□□ 1.7
ACTN2-207ENST00000546208 TRIM41Q8WV44 630 aa25.29■■□□□ 1.64
ACTN2-207ENST00000546208 TTBK1Q5TCY1 1321 aaPredicted RBP25.28■■□□□ 1.64
ACTN2-207ENST00000546208 RANGAP1P46060 587 aaPredicted RBP25.19■■□□□ 1.62
ACTN2-207ENST00000546208 PCGF6Q9BYE7 350 aa25.11■■□□□ 1.61
ACTN2-207ENST00000546208 PELP1Q8IZL8 1130 aaKnown RBP24.97■■□□□ 1.59
ACTN2-207ENST00000546208 ATP1B4Q9UN42 357 aaPredicted RBP24.97■■□□□ 1.59
ACTN2-207ENST00000546208 UBTFP17480 764 aaKnown RBP24.96■■□□□ 1.59
ACTN2-207ENST00000546208 CCER1Q8TC90 406 aaPredicted RBP24.71■■□□□ 1.55
ACTN2-207ENST00000546208 ZEB1P37275 1124 aaPredicted RBP24.64■■□□□ 1.53
ACTN2-207ENST00000546208 PPARGC1BQ86YN6 1023 aaKnown RBP24.4■■□□□ 1.5
ACTN2-207ENST00000546208 CENPBP07199 599 aaPredicted RBP24.34■■□□□ 1.49
ACTN2-207ENST00000546208 ABCC9O60706 1549 aa24.25■■□□□ 1.47
ACTN2-207ENST00000546208 CHIC1Q5VXU3 224 aa24.21■■□□□ 1.47
ACTN2-207ENST00000546208 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.18■■□□□ 1.46
ACTN2-207ENST00000546208 HNRNPUL2Q1KMD3 747 aaKnown RBP24.18■■□□□ 1.46
ACTN2-207ENST00000546208 TRIM26Q12899 539 aaPredicted RBP24.16■■□□□ 1.46
ACTN2-207ENST00000546208 LOC105371045A0A1W2PR82 267 aa24.14■■□□□ 1.45
ACTN2-207ENST00000546208 PABPN1Q86U42 306 aaKnown RBP eCLIP24.12■■□□□ 1.45
ACTN2-207ENST00000546208 ITGAEP38570 1179 aa24.08■■□□□ 1.45
ACTN2-207ENST00000546208 MYT1LQ9UL68 1186 aa24.02■■□□□ 1.44
ACTN2-207ENST00000546208 YTHDC1Q96MU7 727 aaKnown RBP23.93■■□□□ 1.42
ACTN2-207ENST00000546208 NEFLP07196 543 aa23.89■■□□□ 1.42
ACTN2-207ENST00000546208 ERICH6Q7L0X2 663 aa23.85■■□□□ 1.41
ACTN2-207ENST00000546208 POLR3GLQ9BT43 218 aa23.71■■□□□ 1.39
ACTN2-207ENST00000546208 HRCP23327 699 aa23.67■■□□□ 1.38
ACTN2-207ENST00000546208 FAM50AQ14320 339 aaKnown RBP23.53■■□□□ 1.36
ACTN2-207ENST00000546208 CNGB1Q14028 1251 aaPredicted RBP23.45■■□□□ 1.34
ACTN2-207ENST00000546208 FBLN2P98095 1184 aa23.42■■□□□ 1.34
ACTN2-207ENST00000546208 TRIM52Q96A61 297 aa23.37■■□□□ 1.33
ACTN2-207ENST00000546208 SLC4A1APQ9BWU0 796 aaKnown RBP23.31■■□□□ 1.32
ACTN2-207ENST00000546208 CSRNP3Q8WYN3 585 aa23.23■■□□□ 1.31
ACTN2-207ENST00000546208 SCRIBQ14160 1630 aa23.22■■□□□ 1.31
ACTN2-207ENST00000546208 NEUROD1Q13562 356 aa23.21■■□□□ 1.31
ACTN2-207ENST00000546208 DIEXFQ68CQ4 756 aaKnown RBP23.16■■□□□ 1.3
ACTN2-207ENST00000546208 P3H3Q8IVL6 736 aa23.16■■□□□ 1.3
ACTN2-207ENST00000546208 ZCCHC6Q5VYS8 1495 aaKnown RBP23.14■■□□□ 1.3
ACTN2-207ENST00000546208 DAXXQ9UER7 740 aaPredicted RBP23.09■■□□□ 1.29
ACTN2-207ENST00000546208 ARID3CA6NKF2 412 aa23.07■■□□□ 1.28
ACTN2-207ENST00000546208 ZNF326Q5BKZ1 582 aaKnown RBP23.04■■□□□ 1.28
ACTN2-207ENST00000546208 CDK11AQ9UQ88 783 aaPredicted RBP22.91■■□□□ 1.26
ACTN2-207ENST00000546208 CCDC180Q9P1Z9 1646 aa22.91■■□□□ 1.26
ACTN2-207ENST00000546208 ZNF777Q9ULD5 760 aaPredicted RBP22.89■■□□□ 1.26
ACTN2-207ENST00000546208 ANP32CO43423 234 aa22.83■■□□□ 1.25
ACTN2-207ENST00000546208 CLSPNQ9HAW4 1339 aa22.79■■□□□ 1.24
ACTN2-207ENST00000546208 ZNF316A6NFI3 1004 aaPredicted RBP22.73■■□□□ 1.23
ACTN2-207ENST00000546208 BCANQ96GW7 911 aa22.71■■□□□ 1.23
ACTN2-207ENST00000546208 MYT1Q01538 1121 aa22.66■■□□□ 1.22
ACTN2-207ENST00000546208 RB1CC1Q8TDY2 1594 aa22.66■■□□□ 1.22
ACTN2-207ENST00000546208 NPM1P06748 294 aaKnown RBP eCLIP22.63■■□□□ 1.21
ACTN2-207ENST00000546208 ESF1Q9H501 851 aaKnown RBP22.58■■□□□ 1.2
ACTN2-207ENST00000546208 NEFMP07197 916 aa22.51■■□□□ 1.19
ACTN2-207ENST00000546208 CHMP7Q8WUX9 453 aaPredicted RBP22.5■■□□□ 1.19
ACTN2-207ENST00000546208 TONSLQ96HA7 1378 aa22.49■■□□□ 1.19
ACTN2-207ENST00000546208 CHGAP10645 457 aaKnown RBP22.48■■□□□ 1.19
ACTN2-207ENST00000546208 SLC24A1O60721 1099 aa22.46■■□□□ 1.19
ACTN2-207ENST00000546208 ZBTB47Q9UFB7 747 aaPredicted RBP22.46■■□□□ 1.19
ACTN2-207ENST00000546208 CHIC2Q9UKJ5 165 aa22.45■■□□□ 1.19
ACTN2-207ENST00000546208 GTF3C3Q9Y5Q9 886 aa22.45■■□□□ 1.18
ACTN2-207ENST00000546208 RSF1Q96T23 1441 aaPredicted RBP22.44■■□□□ 1.18
ACTN2-207ENST00000546208 STAG3Q9UJ98 1225 aa22.44■■□□□ 1.18
ACTN2-207ENST00000546208 NACADO15069 1562 aa22.43■■□□□ 1.18
ACTN2-207ENST00000546208 RTL5Q5HYW3 569 aaPredicted RBP22.43■■□□□ 1.18
ACTN2-207ENST00000546208 CANXP27824 592 aaKnown RBP22.42■■□□□ 1.18
ACTN2-207ENST00000546208 DCAF1Q9Y4B6 1507 aa22.41■■□□□ 1.18
ACTN2-207ENST00000546208 MTUS2Q5JR59 1369 aa22.4■■□□□ 1.18
ACTN2-207ENST00000546208 TSPY4P0CV99 314 aa22.38■■□□□ 1.17
ACTN2-207ENST00000546208 TSPY10P0CW01 314 aa22.38■■□□□ 1.17
ACTN2-207ENST00000546208 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.37■■□□□ 1.17
ACTN2-207ENST00000546208 CLIP1P30622 1438 aa22.35■■□□□ 1.17
ACTN2-207ENST00000546208 PLPPR3Q6T4P5 718 aa22.32■■□□□ 1.16
ACTN2-207ENST00000546208 BAZ1BQ9UIG0 1483 aaKnown RBP22.31■■□□□ 1.16
ACTN2-207ENST00000546208 BCL11AQ9H165 835 aa22.28■■□□□ 1.16
ACTN2-207ENST00000546208 EEA1Q15075 1411 aa22.26■■□□□ 1.15
ACTN2-207ENST00000546208 WRNQ14191 1432 aaPredicted RBP eCLIP22.25■■□□□ 1.15
ACTN2-207ENST00000546208 DDX10Q13206 875 aaKnown RBP22.23■■□□□ 1.15
ACTN2-207ENST00000546208 GOLGA3Q08378 1498 aa22.18■■□□□ 1.14
ACTN2-207ENST00000546208 PLEKHD1A6NEE1 506 aa22.17■■□□□ 1.14
ACTN2-207ENST00000546208 ACIN1Q9UKV3 1341 aaKnown RBP22.17■■□□□ 1.14
ACTN2-207ENST00000546208 KCNH8Q96L42 1107 aa22.16■■□□□ 1.14
ACTN2-207ENST00000546208 KDM2AQ9Y2K7 1162 aa22.16■■□□□ 1.14
ACTN2-207ENST00000546208 KIF27Q86VH2 1401 aa22.13■■□□□ 1.13
ACTN2-207ENST00000546208 RRP7BPQ9NSQ0 103 aa22.12■■□□□ 1.13
ACTN2-207ENST00000546208 CEP162Q5TB80 1403 aa22.12■■□□□ 1.13
ACTN2-207ENST00000546208 HNRNPUQ00839 825 aaKnown RBP eCLIP22.11■■□□□ 1.13
ACTN2-207ENST00000546208 FAM9BQ8IZU0 186 aa22.11■■□□□ 1.13
ACTN2-207ENST00000546208 BAZ1AQ9NRL2 1556 aaPredicted RBP22.07■■□□□ 1.12
ACTN2-207ENST00000546208 TMC1Q8TDI8 760 aa22.05■■□□□ 1.12
ACTN2-207ENST00000546208 SALL2Q9Y467 1007 aaPredicted RBP22.02■■□□□ 1.12
ACTN2-207ENST00000546208 CECR2Q9BXF3 1484 aa22.01■■□□□ 1.11
ACTN2-207ENST00000546208 MYO15BQ96JP2 1530 aa22■■□□□ 1.11
ACTN2-207ENST00000546208 CEP164Q9UPV0 1460 aa21.99■■□□□ 1.11
ACTN2-207ENST00000546208 CFDP1Q9UEE9 299 aaPredicted RBP21.99■■□□□ 1.11
ACTN2-207ENST00000546208 TNIKQ9UKE5 1360 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms