RNA–Protein interactions for RNA: ENST00000346618.7

E2F3-201, Transcript of E2F transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene E2F3, Length 4,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3-201ENST00000346618 PELP1Q8IZL8 1130 aaKnown RBP25.35■■□□□ 1.65
E2F3-201ENST00000346618 MYT1Q01538 1121 aa25.26■■□□□ 1.63
E2F3-201ENST00000346618 CENPBP07199 599 aaPredicted RBP23.77■■□□□ 1.4
E2F3-201ENST00000346618 ZEB1P37275 1124 aaPredicted RBP23.5■■□□□ 1.35
E2F3-201ENST00000346618 PCGF6Q9BYE7 350 aa23.49■■□□□ 1.35
E2F3-201ENST00000346618 ERICH6Q7L0X2 663 aa23.35■■□□□ 1.33
E2F3-201ENST00000346618 SUPT5HO00267 1087 aaKnown RBP23.34■■□□□ 1.33
E2F3-201ENST00000346618 HRCP23327 699 aa23.31■■□□□ 1.32
E2F3-201ENST00000346618 TTBK1Q5TCY1 1321 aaPredicted RBP23.27■■□□□ 1.32
E2F3-201ENST00000346618 CCER1Q8TC90 406 aaPredicted RBP23.23■■□□□ 1.31
E2F3-201ENST00000346618 DCAF8L2P0C7V8 631 aa22.75■■□□□ 1.23
E2F3-201ENST00000346618 NEFLP07196 543 aa22.6■■□□□ 1.21
E2F3-201ENST00000346618 YTHDC1Q96MU7 727 aaKnown RBP22.56■■□□□ 1.2
E2F3-201ENST00000346618 PPARGC1BQ86YN6 1023 aaKnown RBP22.46■■□□□ 1.19
E2F3-201ENST00000346618 TRIM26Q12899 539 aaPredicted RBP22.44■■□□□ 1.18
E2F3-201ENST00000346618 SHROOM4Q9ULL8 1493 aa22.36■■□□□ 1.17
E2F3-201ENST00000346618 GTF3C3Q9Y5Q9 886 aa22.29■■□□□ 1.16
E2F3-201ENST00000346618 NISCHQ9Y2I1 1504 aa22.26■■□□□ 1.15
E2F3-201ENST00000346618 EHMT2Q96KQ7 1210 aa22.23■■□□□ 1.15
E2F3-201ENST00000346618 APLP2Q06481 763 aa22.14■■□□□ 1.13
E2F3-201ENST00000346618 ACIN1Q9UKV3 1341 aaKnown RBP22.12■■□□□ 1.13
E2F3-201ENST00000346618 RTL5Q5HYW3 569 aaPredicted RBP22.05■■□□□ 1.12
E2F3-201ENST00000346618 DIEXFQ68CQ4 756 aaKnown RBP22.02■■□□□ 1.11
E2F3-201ENST00000346618 FAM9AQ8IZU1 332 aaPredicted RBP21.9■■□□□ 1.1
E2F3-201ENST00000346618 SCAF1Q9H7N4 1312 aaKnown RBP21.82■■□□□ 1.08
E2F3-201ENST00000346618 DAXXQ9UER7 740 aaPredicted RBP21.79■■□□□ 1.08
E2F3-201ENST00000346618 MYT1LQ9UL68 1186 aa21.78■■□□□ 1.08
E2F3-201ENST00000346618 CLSPNQ9HAW4 1339 aa21.67■■□□□ 1.06
E2F3-201ENST00000346618 GLIPR1L2Q4G1C9 344 aa21.64■■□□□ 1.05
E2F3-201ENST00000346618 TRIM41Q8WV44 630 aa21.61■■□□□ 1.05
E2F3-201ENST00000346618 BCL11AQ9H165 835 aa21.56■■□□□ 1.04
E2F3-201ENST00000346618 EIF5BO60841 1220 aaKnown RBP21.52■■□□□ 1.04
E2F3-201ENST00000346618 ANP32EQ9BTT0 268 aa21.49■■□□□ 1.03
E2F3-201ENST00000346618 CDK11AQ9UQ88 783 aaPredicted RBP21.49■■□□□ 1.03
E2F3-201ENST00000346618 CHIC1Q5VXU3 224 aa21.48■■□□□ 1.03
E2F3-201ENST00000346618 NEUROD1Q13562 356 aa21.47■■□□□ 1.03
E2F3-201ENST00000346618 BCANQ96GW7 911 aa21.39■■□□□ 1.01
E2F3-201ENST00000346618 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.38■■□□□ 1.01
E2F3-201ENST00000346618 LOC105371045A0A1W2PR82 267 aa21.36■■□□□ 1.01
E2F3-201ENST00000346618 ZNF316A6NFI3 1004 aaPredicted RBP21.34■■□□□ 1.01
E2F3-201ENST00000346618 ANP32AP39687 249 aaKnown RBP21.14■□□□□ 0.97
E2F3-201ENST00000346618 UBTFP17480 764 aaKnown RBP21.11■□□□□ 0.97
E2F3-201ENST00000346618 HNRNPUL2Q1KMD3 747 aaKnown RBP20.96■□□□□ 0.95
E2F3-201ENST00000346618 FKBP8Q14318 412 aa20.95■□□□□ 0.94
E2F3-201ENST00000346618 DCAF1Q9Y4B6 1507 aa20.9■□□□□ 0.94
E2F3-201ENST00000346618 NBR1Q14596 966 aa20.85■□□□□ 0.93
E2F3-201ENST00000346618 ANP32CO43423 234 aa20.83■□□□□ 0.92
E2F3-201ENST00000346618 RANGAP1P46060 587 aaPredicted RBP20.83■□□□□ 0.92
E2F3-201ENST00000346618 ZBTB47Q9UFB7 747 aaPredicted RBP20.78■□□□□ 0.92
E2F3-201ENST00000346618 CSRNP3Q8WYN3 585 aa20.68■□□□□ 0.9
E2F3-201ENST00000346618 NPM2Q86SE8 214 aaKnown RBP20.62■□□□□ 0.89
E2F3-201ENST00000346618 ERICH6BQ5W0A0 696 aa20.6■□□□□ 0.89
E2F3-201ENST00000346618 MIER1Q8N108 512 aa20.58■□□□□ 0.89
E2F3-201ENST00000346618 DEKP35659 375 aaKnown RBP20.58■□□□□ 0.88
E2F3-201ENST00000346618 ANP32BQ92688 251 aaKnown RBP20.57■□□□□ 0.88
E2F3-201ENST00000346618 PRKCSHP14314 528 aaPredicted RBP20.55■□□□□ 0.88
E2F3-201ENST00000346618 ITGAEP38570 1179 aa20.54■□□□□ 0.88
E2F3-201ENST00000346618 ATP1B4Q9UN42 357 aaPredicted RBP20.52■□□□□ 0.88
E2F3-201ENST00000346618 POLR3GLQ9BT43 218 aa20.5■□□□□ 0.87
E2F3-201ENST00000346618 RTN4Q9NQC3 1192 aaKnown RBP20.5■□□□□ 0.87
E2F3-201ENST00000346618 SUPT16HQ9Y5B9 1047 aaKnown RBP20.49■□□□□ 0.87
E2F3-201ENST00000346618 TNNT2P45379 298 aaPredicted RBP20.48■□□□□ 0.87
E2F3-201ENST00000346618 NEFMP07197 916 aa20.46■□□□□ 0.87
E2F3-201ENST00000346618 PPM1GO15355 546 aaPredicted RBP20.39■□□□□ 0.85
E2F3-201ENST00000346618 CNGB1Q14028 1251 aaPredicted RBP20.37■□□□□ 0.85
E2F3-201ENST00000346618 NOP58Q9Y2X3 529 aaKnown RBP20.36■□□□□ 0.85
E2F3-201ENST00000346618 RBM19Q9Y4C8 960 aaKnown RBP20.34■□□□□ 0.85
E2F3-201ENST00000346618 CCDC136Q96JN2 1154 aa20.32■□□□□ 0.84
E2F3-201ENST00000346618 HNRNPUQ00839 825 aaKnown RBP eCLIP20.31■□□□□ 0.84
E2F3-201ENST00000346618 TSHZ2Q9NRE2 1034 aa20.31■□□□□ 0.84
E2F3-201ENST00000346618 CCDC180Q9P1Z9 1646 aa20.3■□□□□ 0.84
E2F3-201ENST00000346618 DDRGK1Q96HY6 314 aa20.29■□□□□ 0.84
E2F3-201ENST00000346618 NAP1L5Q96NT1 182 aaPredicted RBP20.29■□□□□ 0.84
E2F3-201ENST00000346618 NCLP19338 710 aaKnown RBP20.27■□□□□ 0.84
E2F3-201ENST00000346618 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.24■□□□□ 0.83
E2F3-201ENST00000346618 TRIM52Q96A61 297 aa20.22■□□□□ 0.83
E2F3-201ENST00000346618 TRIM44Q96DX7 344 aaPredicted RBP20.21■□□□□ 0.83
E2F3-201ENST00000346618 UPF2Q9HAU5 1272 aaKnown RBP20.17■□□□□ 0.82
E2F3-201ENST00000346618 CDK11BP21127 795 aaKnown RBP20.15■□□□□ 0.82
E2F3-201ENST00000346618 DDX10Q13206 875 aaKnown RBP20.14■□□□□ 0.81
E2F3-201ENST00000346618 HSP90AA1P07900 732 aaKnown RBP20.1■□□□□ 0.81
E2F3-201ENST00000346618 ARXQ96QS3 562 aa20.1■□□□□ 0.81
E2F3-201ENST00000346618 IRX6P78412 446 aaPredicted RBP20.07■□□□□ 0.8
E2F3-201ENST00000346618 PPP4R2Q9NY27 417 aa20.07■□□□□ 0.8
E2F3-201ENST00000346618 RSPH6AQ9H0K4 717 aa20.06■□□□□ 0.8
E2F3-201ENST00000346618 LAS1LQ9Y4W2 734 aaKnown RBP20.01■□□□□ 0.79
E2F3-201ENST00000346618 SLC24A1O60721 1099 aa20■□□□□ 0.79
E2F3-201ENST00000346618 VSIG10Q8N0Z9 540 aa20■□□□□ 0.79
E2F3-201ENST00000346618 BECN1Q14457 450 aa19.99■□□□□ 0.79
E2F3-201ENST00000346618 PKNOX2Q96KN3 472 aa19.98■□□□□ 0.79
E2F3-201ENST00000346618 CANXP27824 592 aaKnown RBP19.96■□□□□ 0.79
E2F3-201ENST00000346618 L1TD1Q5T7N2 865 aaKnown RBP19.96■□□□□ 0.79
E2F3-201ENST00000346618 FAM50AQ14320 339 aaKnown RBP19.94■□□□□ 0.78
E2F3-201ENST00000346618 FAM9BQ8IZU0 186 aa19.94■□□□□ 0.78
E2F3-201ENST00000346618 PNNQ9H307 717 aaKnown RBP19.92■□□□□ 0.78
E2F3-201ENST00000346618 HSP90AA2PQ14568 343 aaPredicted RBP19.91■□□□□ 0.78
E2F3-201ENST00000346618 MYO15BQ96JP2 1530 aa19.88■□□□□ 0.77
E2F3-201ENST00000346618 ANO8Q9HCE9 1232 aaPredicted RBP19.87■□□□□ 0.77
E2F3-201ENST00000346618 PODXL2Q9NZ53 605 aa19.87■□□□□ 0.77
E2F3-201ENST00000346618 USP35Q9P2H5 1018 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms