RNA–Protein interactions for RNA: ENST00000360442.7

PAK4-203, Transcript of p21 (RAC1) activated kinase 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PAK4, Length 2,855 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAK4-203ENST00000360442 NISCHQ9Y2I1 1504 aa35.88■■■■□ 3.33
PAK4-203ENST00000360442 CCDC180Q9P1Z9 1646 aa30.59■■■□□ 2.49
PAK4-203ENST00000360442 SHROOM4Q9ULL8 1493 aa30.5■■■□□ 2.47
PAK4-203ENST00000360442 ZCCHC6Q5VYS8 1495 aaKnown RBP30.28■■■□□ 2.44
PAK4-203ENST00000360442 DCAF8L2P0C7V8 631 aa29.95■■■□□ 2.39
PAK4-203ENST00000360442 SUPT5HO00267 1087 aaKnown RBP29.75■■■□□ 2.35
PAK4-203ENST00000360442 DCAF1Q9Y4B6 1507 aa29.37■■■□□ 2.29
PAK4-203ENST00000360442 SCRIBQ14160 1630 aa28.73■■■□□ 2.19
PAK4-203ENST00000360442 CHIC1Q5VXU3 224 aa28.73■■■□□ 2.19
PAK4-203ENST00000360442 ABCC9O60706 1549 aa28.71■■■□□ 2.19
PAK4-203ENST00000360442 MYO15BQ96JP2 1530 aa28.61■■■□□ 2.17
PAK4-203ENST00000360442 NACADO15069 1562 aa28.36■■■□□ 2.13
PAK4-203ENST00000360442 RSF1Q96T23 1441 aaPredicted RBP28.3■■■□□ 2.12
PAK4-203ENST00000360442 CECR2Q9BXF3 1484 aa28.07■■■□□ 2.08
PAK4-203ENST00000360442 RB1CC1Q8TDY2 1594 aa27.99■■■□□ 2.07
PAK4-203ENST00000360442 LOC105371045A0A1W2PR82 267 aa27.93■■■□□ 2.06
PAK4-203ENST00000360442 MROH2BQ7Z745 1585 aa27.92■■■□□ 2.06
PAK4-203ENST00000360442 WIZO95785 1651 aa27.77■■■□□ 2.04
PAK4-203ENST00000360442 TRIM41Q8WV44 630 aa27.68■■■□□ 2.02
PAK4-203ENST00000360442 UNC13AQ9UPW8 1703 aa27.62■■■□□ 2.01
PAK4-203ENST00000360442 PCGF6Q9BYE7 350 aa27.58■■■□□ 2
PAK4-203ENST00000360442 BAZ1AQ9NRL2 1556 aaPredicted RBP27.56■■■□□ 2
PAK4-203ENST00000360442 FAM9AQ8IZU1 332 aaPredicted RBP27.52■■■□□ 2
PAK4-203ENST00000360442 PABPN1Q86U42 306 aaKnown RBP eCLIP27.43■■□□□ 1.98
PAK4-203ENST00000360442 SMARCA4P51532 1647 aa27.39■■□□□ 1.98
PAK4-203ENST00000360442 EHMT2Q96KQ7 1210 aa27.36■■□□□ 1.97
PAK4-203ENST00000360442 HRCP23327 699 aa27.3■■□□□ 1.96
PAK4-203ENST00000360442 BICRAQ9NZM4 1560 aa27.28■■□□□ 1.96
PAK4-203ENST00000360442 TOP2AP11388 1531 aaKnown RBP27.27■■□□□ 1.96
PAK4-203ENST00000360442 EIF4G1Q04637 1599 aaKnown RBP27.22■■□□□ 1.95
PAK4-203ENST00000360442 CCDC88BA6NC98 1476 aa27.19■■□□□ 1.94
PAK4-203ENST00000360442 SMARCA2P51531 1590 aa27.14■■□□□ 1.93
PAK4-203ENST00000360442 ABCC8Q09428 1581 aa27.07■■□□□ 1.92
PAK4-203ENST00000360442 TRIM26Q12899 539 aaPredicted RBP27.05■■□□□ 1.92
PAK4-203ENST00000360442 PPARGC1BQ86YN6 1023 aaKnown RBP26.91■■□□□ 1.9
PAK4-203ENST00000360442 PEG3Q9GZU2 1588 aa26.83■■□□□ 1.89
PAK4-203ENST00000360442 ATAD2BQ9ULI0 1458 aa26.77■■□□□ 1.88
PAK4-203ENST00000360442 SOGA1O94964 1423 aa26.74■■□□□ 1.87
PAK4-203ENST00000360442 BAZ1BQ9UIG0 1483 aaKnown RBP26.68■■□□□ 1.86
PAK4-203ENST00000360442 RUSC2Q8N2Y8 1516 aa26.65■■□□□ 1.86
PAK4-203ENST00000360442 WRNQ14191 1432 aaPredicted RBP eCLIP26.59■■□□□ 1.85
PAK4-203ENST00000360442 CSRNP3Q8WYN3 585 aa26.52■■□□□ 1.84
PAK4-203ENST00000360442 SYNJ1O43426 1573 aa26.5■■□□□ 1.83
PAK4-203ENST00000360442 CEP162Q5TB80 1403 aa26.44■■□□□ 1.82
PAK4-203ENST00000360442 UBTFP17480 764 aaKnown RBP26.43■■□□□ 1.82
PAK4-203ENST00000360442 EEA1Q15075 1411 aa26.43■■□□□ 1.82
PAK4-203ENST00000360442 TNIKQ9UKE5 1360 aa26.38■■□□□ 1.81
PAK4-203ENST00000360442 TTBK1Q5TCY1 1321 aaPredicted RBP26.38■■□□□ 1.81
PAK4-203ENST00000360442 GOLGA3Q08378 1498 aa26.29■■□□□ 1.8
PAK4-203ENST00000360442 NCAPD3P42695 1498 aa26.26■■□□□ 1.79
PAK4-203ENST00000360442 ZEB1P37275 1124 aaPredicted RBP26.24■■□□□ 1.79
PAK4-203ENST00000360442 HMGXB3Q12766 1538 aa26.22■■□□□ 1.79
PAK4-203ENST00000360442 CEP164Q9UPV0 1460 aa26.17■■□□□ 1.78
PAK4-203ENST00000360442 TOP2BQ02880 1626 aa26.15■■□□□ 1.78
PAK4-203ENST00000360442 KIF21BO75037 1637 aa26.12■■□□□ 1.77
PAK4-203ENST00000360442 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.12■■□□□ 1.77
PAK4-203ENST00000360442 RAPGEF2Q9Y4G8 1499 aa26.09■■□□□ 1.77
PAK4-203ENST00000360442 RANGAP1P46060 587 aaPredicted RBP26.08■■□□□ 1.76
PAK4-203ENST00000360442 BIVM-ERCC5R4GMW8 1640 aa26.05■■□□□ 1.76
PAK4-203ENST00000360442 CLIP1P30622 1438 aa26.01■■□□□ 1.75
PAK4-203ENST00000360442 CUX1P39880 1505 aa26.01■■□□□ 1.75
PAK4-203ENST00000360442 CFTRP13569 1480 aa25.99■■□□□ 1.75
PAK4-203ENST00000360442 CCER1Q8TC90 406 aaPredicted RBP25.98■■□□□ 1.75
PAK4-203ENST00000360442 VPS8Q8N3P4 1428 aa25.84■■□□□ 1.73
PAK4-203ENST00000360442 CC2D2AQ9P2K1 1620 aa25.82■■□□□ 1.72
PAK4-203ENST00000360442 PRXQ9BXM0 1461 aa25.82■■□□□ 1.72
PAK4-203ENST00000360442 KIF27Q86VH2 1401 aa25.77■■□□□ 1.72
PAK4-203ENST00000360442 CADPSQ9ULU8 1353 aa25.77■■□□□ 1.72
PAK4-203ENST00000360442 ERICH3Q5RHP9 1530 aa25.75■■□□□ 1.71
PAK4-203ENST00000360442 PRDM2Q13029 1718 aa25.73■■□□□ 1.71
PAK4-203ENST00000360442 APLP2Q06481 763 aa25.71■■□□□ 1.71
PAK4-203ENST00000360442 HNRNPUL2Q1KMD3 747 aaKnown RBP25.69■■□□□ 1.7
PAK4-203ENST00000360442 ARAP1Q96P48 1450 aa25.64■■□□□ 1.69
PAK4-203ENST00000360442 CUX2O14529 1486 aa25.63■■□□□ 1.69
PAK4-203ENST00000360442 FGD5Q6ZNL6 1462 aa25.58■■□□□ 1.69
PAK4-203ENST00000360442 IGF1RP08069 1367 aa25.55■■□□□ 1.68
PAK4-203ENST00000360442 FANCD2Q9BXW9 1451 aa25.53■■□□□ 1.68
PAK4-203ENST00000360442 KANK4Q5T7N3 995 aaPredicted RBP25.51■■□□□ 1.67
PAK4-203ENST00000360442 NESP48681 1621 aa25.51■■□□□ 1.67
PAK4-203ENST00000360442 ARHGAP35Q9NRY4 1499 aa25.47■■□□□ 1.67
PAK4-203ENST00000360442 CARMIL1Q5VZK9 1371 aa25.43■■□□□ 1.66
PAK4-203ENST00000360442 RAD54L2Q9Y4B4 1467 aa25.4■■□□□ 1.66
PAK4-203ENST00000360442 DNAJC5BQ9UF47 199 aa25.38■■□□□ 1.65
PAK4-203ENST00000360442 TOPBP1Q92547 1522 aa25.34■■□□□ 1.65
PAK4-203ENST00000360442 DNMBPQ6XZF7 1577 aa25.34■■□□□ 1.65
PAK4-203ENST00000360442 POLA1P09884 1462 aaPredicted RBP25.32■■□□□ 1.64
PAK4-203ENST00000360442 DIEXFQ68CQ4 756 aaKnown RBP25.28■■□□□ 1.64
PAK4-203ENST00000360442 P3H3Q8IVL6 736 aa25.26■■□□□ 1.63
PAK4-203ENST00000360442 ABCA10Q8WWZ4 1543 aa25.24■■□□□ 1.63
PAK4-203ENST00000360442 URB2Q14146 1524 aaKnown RBP25.2■■□□□ 1.62
PAK4-203ENST00000360442 LAMC3Q9Y6N6 1575 aa25.18■■□□□ 1.62
PAK4-203ENST00000360442 RRBP1Q9P2E9 1410 aaKnown RBP25.17■■□□□ 1.62
PAK4-203ENST00000360442 ITGAEP38570 1179 aa25.16■■□□□ 1.62
PAK4-203ENST00000360442 ZNF316A6NFI3 1004 aaPredicted RBP25.16■■□□□ 1.62
PAK4-203ENST00000360442 ATP1B4Q9UN42 357 aaPredicted RBP25.12■■□□□ 1.61
PAK4-203ENST00000360442 CCNB3Q8WWL7 1395 aa25.12■■□□□ 1.61
PAK4-203ENST00000360442 TIAM1Q13009 1591 aa25.11■■□□□ 1.61
PAK4-203ENST00000360442 TDRD9Q8NDG6 1382 aaKnown RBP25.11■■□□□ 1.61
PAK4-203ENST00000360442 FHOD3Q2V2M9 1422 aa25.09■■□□□ 1.61
PAK4-203ENST00000360442 DHX57Q6P158 1386 aaKnown RBP25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms