Protein–RNA interactions for Protein: Q9NPA2

MMP25, Matrix metalloproteinase-25, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP25Q9NPA2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
MMP25Q9NPA2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
MMP25Q9NPA2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MMP25Q9NPA2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MMP25Q9NPA2 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MMP25Q9NPA2 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
MMP25Q9NPA2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MMP25Q9NPA2 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MMP25Q9NPA2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MMP25Q9NPA2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
MMP25Q9NPA2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MMP25Q9NPA2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MMP25Q9NPA2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MMP25Q9NPA2 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
MMP25Q9NPA2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.28■■□□□ 1.16
MMP25Q9NPA2 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.28■■□□□ 1.16
MMP25Q9NPA2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.28■■□□□ 1.16
MMP25Q9NPA2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
MMP25Q9NPA2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
MMP25Q9NPA2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
MMP25Q9NPA2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.28■■□□□ 1.16
MMP25Q9NPA2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
MMP25Q9NPA2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.27■■□□□ 1.16
MMP25Q9NPA2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.15
MMP25Q9NPA2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
MMP25Q9NPA2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
MMP25Q9NPA2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
MMP25Q9NPA2 AC091060.1-201ENST00000623524 1766 ntBASIC22.26■■□□□ 1.15
MMP25Q9NPA2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
MMP25Q9NPA2 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.26■■□□□ 1.15
MMP25Q9NPA2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MMP25Q9NPA2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
MMP25Q9NPA2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.25■■□□□ 1.15
MMP25Q9NPA2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MMP25Q9NPA2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.25■■□□□ 1.15
MMP25Q9NPA2 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
MMP25Q9NPA2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.24■■□□□ 1.15
MMP25Q9NPA2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.24■■□□□ 1.15
MMP25Q9NPA2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.24■■□□□ 1.15
MMP25Q9NPA2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
MMP25Q9NPA2 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
MMP25Q9NPA2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
MMP25Q9NPA2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
MMP25Q9NPA2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.23■■□□□ 1.15
MMP25Q9NPA2 AL451085.2-201ENST00000605085 799 ntBASIC22.23■■□□□ 1.15
MMP25Q9NPA2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.23■■□□□ 1.15
MMP25Q9NPA2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.23■■□□□ 1.15
MMP25Q9NPA2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
MMP25Q9NPA2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.22■■□□□ 1.15
MMP25Q9NPA2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
MMP25Q9NPA2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.22■■□□□ 1.15
MMP25Q9NPA2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.22■■□□□ 1.15
MMP25Q9NPA2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
MMP25Q9NPA2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
MMP25Q9NPA2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.22■■□□□ 1.15
MMP25Q9NPA2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
MMP25Q9NPA2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
MMP25Q9NPA2 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.21■■□□□ 1.15
MMP25Q9NPA2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
MMP25Q9NPA2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
MMP25Q9NPA2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
MMP25Q9NPA2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
MMP25Q9NPA2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
MMP25Q9NPA2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.2■■□□□ 1.14
MMP25Q9NPA2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
MMP25Q9NPA2 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
MMP25Q9NPA2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.2■■□□□ 1.14
MMP25Q9NPA2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
MMP25Q9NPA2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
MMP25Q9NPA2 AC022616.5-201ENST00000518796 181 ntBASIC22.19■■□□□ 1.14
MMP25Q9NPA2 AC103724.3-201ENST00000564481 992 ntBASIC22.19■■□□□ 1.14
MMP25Q9NPA2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
MMP25Q9NPA2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
MMP25Q9NPA2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
MMP25Q9NPA2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
MMP25Q9NPA2 AL035685.1-201ENST00000636663 812 ntBASIC22.18■■□□□ 1.14
MMP25Q9NPA2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
MMP25Q9NPA2 AC145676.1-201ENST00000514988 2004 ntBASIC22.18■■□□□ 1.14
MMP25Q9NPA2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
MMP25Q9NPA2 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
MMP25Q9NPA2 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
MMP25Q9NPA2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.17■■□□□ 1.14
MMP25Q9NPA2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
MMP25Q9NPA2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.17■■□□□ 1.14
MMP25Q9NPA2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
MMP25Q9NPA2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.17■■□□□ 1.14
MMP25Q9NPA2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.17■■□□□ 1.14
MMP25Q9NPA2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
MMP25Q9NPA2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
MMP25Q9NPA2 AC092803.2-201ENST00000564287 1899 ntBASIC22.17■■□□□ 1.14
MMP25Q9NPA2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
MMP25Q9NPA2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
MMP25Q9NPA2 AL031848.2-201ENST00000607670 837 ntBASIC22.16■■□□□ 1.14
MMP25Q9NPA2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.16■■□□□ 1.14
MMP25Q9NPA2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.16■■□□□ 1.14
MMP25Q9NPA2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
MMP25Q9NPA2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
MMP25Q9NPA2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
MMP25Q9NPA2 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
MMP25Q9NPA2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms