Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AP006261.1-201ENST00000584783 668 ntBASIC15.86■□□□□ 0.13
SND1-IT1Q9HBX3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SND1-IT1Q9HBX3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SND1-IT1Q9HBX3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC15.86■□□□□ 0.13
SND1-IT1Q9HBX3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SND1-IT1Q9HBX3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC15.85■□□□□ 0.13
SND1-IT1Q9HBX3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SND1-IT1Q9HBX3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SND1-IT1Q9HBX3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SND1-IT1Q9HBX3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC15.85■□□□□ 0.13
SND1-IT1Q9HBX3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SND1-IT1Q9HBX3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC15.85■□□□□ 0.13
SND1-IT1Q9HBX3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SND1-IT1Q9HBX3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SND1-IT1Q9HBX3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SND1-IT1Q9HBX3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SND1-IT1Q9HBX3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SND1-IT1Q9HBX3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC15.84■□□□□ 0.13
SND1-IT1Q9HBX3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SND1-IT1Q9HBX3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SND1-IT1Q9HBX3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SND1-IT1Q9HBX3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC15.84■□□□□ 0.13
SND1-IT1Q9HBX3 LINC01124-201ENST00000409786 2117 ntBASIC15.84■□□□□ 0.13
SND1-IT1Q9HBX3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SND1-IT1Q9HBX3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SND1-IT1Q9HBX3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC15.84■□□□□ 0.13
SND1-IT1Q9HBX3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SND1-IT1Q9HBX3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SND1-IT1Q9HBX3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SND1-IT1Q9HBX3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SND1-IT1Q9HBX3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SND1-IT1Q9HBX3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SND1-IT1Q9HBX3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SND1-IT1Q9HBX3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
SND1-IT1Q9HBX3 AC087741.3-201ENST00000624270 1347 ntBASIC15.83■□□□□ 0.12
SND1-IT1Q9HBX3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SND1-IT1Q9HBX3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SND1-IT1Q9HBX3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SND1-IT1Q9HBX3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SND1-IT1Q9HBX3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
SND1-IT1Q9HBX3 AC068473.5-201ENST00000616428 2072 ntBASIC15.82■□□□□ 0.12
SND1-IT1Q9HBX3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SND1-IT1Q9HBX3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SND1-IT1Q9HBX3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SND1-IT1Q9HBX3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SND1-IT1Q9HBX3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SND1-IT1Q9HBX3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC15.82■□□□□ 0.12
SND1-IT1Q9HBX3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SND1-IT1Q9HBX3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SND1-IT1Q9HBX3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SND1-IT1Q9HBX3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SND1-IT1Q9HBX3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SND1-IT1Q9HBX3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SND1-IT1Q9HBX3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SND1-IT1Q9HBX3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SND1-IT1Q9HBX3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SND1-IT1Q9HBX3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SND1-IT1Q9HBX3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SND1-IT1Q9HBX3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SND1-IT1Q9HBX3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC15.81■□□□□ 0.12
SND1-IT1Q9HBX3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SND1-IT1Q9HBX3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SND1-IT1Q9HBX3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
SND1-IT1Q9HBX3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SND1-IT1Q9HBX3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SND1-IT1Q9HBX3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC15.8■□□□□ 0.12
SND1-IT1Q9HBX3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
SND1-IT1Q9HBX3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SND1-IT1Q9HBX3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SND1-IT1Q9HBX3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SND1-IT1Q9HBX3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SND1-IT1Q9HBX3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SND1-IT1Q9HBX3 AC044849.2-201ENST00000606596 710 ntBASIC15.8■□□□□ 0.12
SND1-IT1Q9HBX3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SND1-IT1Q9HBX3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SND1-IT1Q9HBX3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SND1-IT1Q9HBX3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC15.8■□□□□ 0.12
SND1-IT1Q9HBX3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SND1-IT1Q9HBX3 EED-207ENST00000528180 1745 ntTSL 5 BASIC15.8■□□□□ 0.12
SND1-IT1Q9HBX3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SND1-IT1Q9HBX3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SND1-IT1Q9HBX3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC15.79■□□□□ 0.12
SND1-IT1Q9HBX3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SND1-IT1Q9HBX3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SND1-IT1Q9HBX3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SND1-IT1Q9HBX3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SND1-IT1Q9HBX3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SND1-IT1Q9HBX3 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SND1-IT1Q9HBX3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SND1-IT1Q9HBX3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SND1-IT1Q9HBX3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC15.78■□□□□ 0.12
SND1-IT1Q9HBX3 AC097639.1-201ENST00000565519 1891 ntBASIC15.78■□□□□ 0.12
SND1-IT1Q9HBX3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SND1-IT1Q9HBX3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SND1-IT1Q9HBX3 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SND1-IT1Q9HBX3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC15.78■□□□□ 0.12
SND1-IT1Q9HBX3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC15.78■□□□□ 0.12
SND1-IT1Q9HBX3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC15.78■□□□□ 0.12
SND1-IT1Q9HBX3 AP003733.4-201ENST00000623785 1697 ntBASIC15.78■□□□□ 0.12
SND1-IT1Q9HBX3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms