RNA–Protein interactions for RNA: ENST00000371561.7

GRIN1-208, Transcript of glutamate ionotropic receptor NMDA type subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GRIN1, Length 5,149 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN1-208ENST00000371561 DCAF8L2P0C7V8 631 aa34.65■■■■□ 3.14
GRIN1-208ENST00000371561 SUPT5HO00267 1087 aaKnown RBP33.33■■■□□ 2.93
GRIN1-208ENST00000371561 PELP1Q8IZL8 1130 aaKnown RBP32.48■■■□□ 2.79
GRIN1-208ENST00000371561 SHROOM4Q9ULL8 1493 aa32.43■■■□□ 2.78
GRIN1-208ENST00000371561 NISCHQ9Y2I1 1504 aa32.42■■■□□ 2.78
GRIN1-208ENST00000371561 EHMT2Q96KQ7 1210 aa32.28■■■□□ 2.76
GRIN1-208ENST00000371561 APLP2Q06481 763 aa31.82■■■□□ 2.68
GRIN1-208ENST00000371561 PCGF6Q9BYE7 350 aa31.62■■■□□ 2.65
GRIN1-208ENST00000371561 FAM9AQ8IZU1 332 aaPredicted RBP31.48■■■□□ 2.63
GRIN1-208ENST00000371561 CENPBP07199 599 aaPredicted RBP31.34■■■□□ 2.61
GRIN1-208ENST00000371561 TTBK1Q5TCY1 1321 aaPredicted RBP31.3■■■□□ 2.6
GRIN1-208ENST00000371561 ZEB1P37275 1124 aaPredicted RBP31.2■■■□□ 2.59
GRIN1-208ENST00000371561 ERICH6Q7L0X2 663 aa31.11■■■□□ 2.57
GRIN1-208ENST00000371561 CCER1Q8TC90 406 aaPredicted RBP31.01■■■□□ 2.55
GRIN1-208ENST00000371561 TRIM41Q8WV44 630 aa30.82■■■□□ 2.52
GRIN1-208ENST00000371561 RANGAP1P46060 587 aaPredicted RBP30.75■■■□□ 2.51
GRIN1-208ENST00000371561 MYT1Q01538 1121 aa30.63■■■□□ 2.49
GRIN1-208ENST00000371561 NEFLP07196 543 aa30.58■■■□□ 2.49
GRIN1-208ENST00000371561 YTHDC1Q96MU7 727 aaKnown RBP30.5■■■□□ 2.47
GRIN1-208ENST00000371561 UBTFP17480 764 aaKnown RBP30.49■■■□□ 2.47
GRIN1-208ENST00000371561 ATP1B4Q9UN42 357 aaPredicted RBP30.47■■■□□ 2.47
GRIN1-208ENST00000371561 TRIM26Q12899 539 aaPredicted RBP30.16■■■□□ 2.42
GRIN1-208ENST00000371561 PPARGC1BQ86YN6 1023 aaKnown RBP30.12■■■□□ 2.41
GRIN1-208ENST00000371561 HRCP23327 699 aa30.08■■■□□ 2.41
GRIN1-208ENST00000371561 DAXXQ9UER7 740 aaPredicted RBP29.69■■■□□ 2.34
GRIN1-208ENST00000371561 ITGAEP38570 1179 aa29.61■■■□□ 2.33
GRIN1-208ENST00000371561 LOC105371045A0A1W2PR82 267 aa29.61■■■□□ 2.33
GRIN1-208ENST00000371561 CHIC1Q5VXU3 224 aa29.54■■■□□ 2.32
GRIN1-208ENST00000371561 HNRNPUL2Q1KMD3 747 aaKnown RBP29.51■■■□□ 2.31
GRIN1-208ENST00000371561 POLR3GLQ9BT43 218 aa29.51■■■□□ 2.31
GRIN1-208ENST00000371561 DIEXFQ68CQ4 756 aaKnown RBP29.3■■■□□ 2.28
GRIN1-208ENST00000371561 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.28■■■□□ 2.28
GRIN1-208ENST00000371561 CNGB1Q14028 1251 aaPredicted RBP29.26■■■□□ 2.27
GRIN1-208ENST00000371561 MYT1LQ9UL68 1186 aa29.17■■■□□ 2.26
GRIN1-208ENST00000371561 RTL5Q5HYW3 569 aaPredicted RBP29.16■■■□□ 2.26
GRIN1-208ENST00000371561 ZNF316A6NFI3 1004 aaPredicted RBP28.98■■■□□ 2.23
GRIN1-208ENST00000371561 CLSPNQ9HAW4 1339 aa28.96■■■□□ 2.23
GRIN1-208ENST00000371561 GTF3C3Q9Y5Q9 886 aa28.87■■■□□ 2.21
GRIN1-208ENST00000371561 SLC4A1APQ9BWU0 796 aaKnown RBP28.81■■■□□ 2.2
GRIN1-208ENST00000371561 FAM50AQ14320 339 aaKnown RBP28.77■■■□□ 2.2
GRIN1-208ENST00000371561 BCANQ96GW7 911 aa28.76■■■□□ 2.19
GRIN1-208ENST00000371561 NEUROD1Q13562 356 aa28.67■■■□□ 2.18
GRIN1-208ENST00000371561 TRIM52Q96A61 297 aa28.65■■■□□ 2.18
GRIN1-208ENST00000371561 ANP32CO43423 234 aa28.61■■■□□ 2.17
GRIN1-208ENST00000371561 CDK11AQ9UQ88 783 aaPredicted RBP28.6■■■□□ 2.17
GRIN1-208ENST00000371561 ACIN1Q9UKV3 1341 aaKnown RBP28.43■■■□□ 2.14
GRIN1-208ENST00000371561 ZNF326Q5BKZ1 582 aaKnown RBP28.37■■■□□ 2.13
GRIN1-208ENST00000371561 ZBTB47Q9UFB7 747 aaPredicted RBP28.27■■■□□ 2.12
GRIN1-208ENST00000371561 ANP32AP39687 249 aaKnown RBP28.16■■■□□ 2.1
GRIN1-208ENST00000371561 CANXP27824 592 aaKnown RBP28.13■■■□□ 2.09
GRIN1-208ENST00000371561 PABPN1Q86U42 306 aaKnown RBP eCLIP28.03■■■□□ 2.08
GRIN1-208ENST00000371561 CSRNP3Q8WYN3 585 aa27.98■■■□□ 2.07
GRIN1-208ENST00000371561 BCL11AQ9H165 835 aa27.97■■■□□ 2.07
GRIN1-208ENST00000371561 NPM2Q86SE8 214 aaKnown RBP27.94■■■□□ 2.06
GRIN1-208ENST00000371561 FKBP8Q14318 412 aa27.93■■■□□ 2.06
GRIN1-208ENST00000371561 NEFMP07197 916 aa27.92■■■□□ 2.06
GRIN1-208ENST00000371561 P3H3Q8IVL6 736 aa27.86■■■□□ 2.05
GRIN1-208ENST00000371561 SLC24A1O60721 1099 aa27.81■■■□□ 2.04
GRIN1-208ENST00000371561 FBLN2P98095 1184 aa27.79■■■□□ 2.04
GRIN1-208ENST00000371561 ABCC9O60706 1549 aa27.78■■■□□ 2.04
GRIN1-208ENST00000371561 EIF5BO60841 1220 aaKnown RBP27.77■■■□□ 2.04
GRIN1-208ENST00000371561 HNRNPUQ00839 825 aaKnown RBP eCLIP27.77■■■□□ 2.04
GRIN1-208ENST00000371561 ARID3CA6NKF2 412 aa27.73■■■□□ 2.03
GRIN1-208ENST00000371561 TONSLQ96HA7 1378 aa27.71■■■□□ 2.03
GRIN1-208ENST00000371561 DDX10Q13206 875 aaKnown RBP27.69■■■□□ 2.02
GRIN1-208ENST00000371561 ANP32BQ92688 251 aaKnown RBP27.68■■■□□ 2.02
GRIN1-208ENST00000371561 ZNF777Q9ULD5 760 aaPredicted RBP27.66■■■□□ 2.02
GRIN1-208ENST00000371561 FAM9BQ8IZU0 186 aa27.63■■■□□ 2.01
GRIN1-208ENST00000371561 HSP90AA1P07900 732 aaKnown RBP27.62■■■□□ 2.01
GRIN1-208ENST00000371561 UPF2Q9HAU5 1272 aaKnown RBP27.61■■■□□ 2.01
GRIN1-208ENST00000371561 DCAF1Q9Y4B6 1507 aa27.59■■■□□ 2.01
GRIN1-208ENST00000371561 CCDC136Q96JN2 1154 aa27.54■■■□□ 2
GRIN1-208ENST00000371561 SALL2Q9Y467 1007 aaPredicted RBP27.47■■□□□ 1.99
GRIN1-208ENST00000371561 NBR1Q14596 966 aa27.45■■□□□ 1.98
GRIN1-208ENST00000371561 SCAF1Q9H7N4 1312 aaKnown RBP27.44■■□□□ 1.98
GRIN1-208ENST00000371561 TMC1Q8TDI8 760 aa27.44■■□□□ 1.98
GRIN1-208ENST00000371561 GLIPR1L2Q4G1C9 344 aa27.4■■□□□ 1.98
GRIN1-208ENST00000371561 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.38■■□□□ 1.97
GRIN1-208ENST00000371561 MIER1Q8N108 512 aa27.36■■□□□ 1.97
GRIN1-208ENST00000371561 MRS2Q9HD23 443 aa27.36■■□□□ 1.97
GRIN1-208ENST00000371561 CHGAP10645 457 aaKnown RBP27.31■■□□□ 1.96
GRIN1-208ENST00000371561 CHIC2Q9UKJ5 165 aa27.25■■□□□ 1.95
GRIN1-208ENST00000371561 IRX6P78412 446 aaPredicted RBP27.23■■□□□ 1.95
GRIN1-208ENST00000371561 WDR43Q15061 677 aaKnown RBP eCLIP27.22■■□□□ 1.95
GRIN1-208ENST00000371561 ARXQ96QS3 562 aa27.22■■□□□ 1.95
GRIN1-208ENST00000371561 STAG3Q9UJ98 1225 aa27.16■■□□□ 1.94
GRIN1-208ENST00000371561 ESF1Q9H501 851 aaKnown RBP27.15■■□□□ 1.94
GRIN1-208ENST00000371561 HIRIP3Q9BW71 556 aaPredicted RBP27.12■■□□□ 1.93
GRIN1-208ENST00000371561 KDM2AQ9Y2K7 1162 aa27.08■■□□□ 1.93
GRIN1-208ENST00000371561 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.08■■□□□ 1.93
GRIN1-208ENST00000371561 EIF4G2P78344 907 aaKnown RBP eCLIP27.07■■□□□ 1.92
GRIN1-208ENST00000371561 TSPY4P0CV99 314 aa27.04■■□□□ 1.92
GRIN1-208ENST00000371561 TSPY10P0CW01 314 aa27.04■■□□□ 1.92
GRIN1-208ENST00000371561 MTUS2Q5JR59 1369 aa27.01■■□□□ 1.91
GRIN1-208ENST00000371561 DDRGK1Q96HY6 314 aa26.99■■□□□ 1.91
GRIN1-208ENST00000371561 SCRIBQ14160 1630 aa26.96■■□□□ 1.91
GRIN1-208ENST00000371561 BECN1Q14457 450 aa26.96■■□□□ 1.91
GRIN1-208ENST00000371561 CLIP1P30622 1438 aa26.95■■□□□ 1.91
GRIN1-208ENST00000371561 MYH16Q9H6N6 1097 aa26.95■■□□□ 1.9
GRIN1-208ENST00000371561 ANP32EQ9BTT0 268 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms