RNA–Protein interactions for RNA: ENST00000289228.6

ACTR1B-201, Transcript of ARP1 actin related protein 1 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTR1B, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR1B-201ENST00000289228 NISCHQ9Y2I1 1504 aa46.81■■■■■ 5.08
ACTR1B-201ENST00000289228 SHROOM4Q9ULL8 1493 aa39.83■■■■□ 3.97
ACTR1B-201ENST00000289228 CCDC180Q9P1Z9 1646 aa39.83■■■■□ 3.97
ACTR1B-201ENST00000289228 ZCCHC6Q5VYS8 1495 aaKnown RBP39.62■■■■□ 3.93
ACTR1B-201ENST00000289228 SUPT5HO00267 1087 aaKnown RBP39.12■■■■□ 3.85
ACTR1B-201ENST00000289228 DCAF8L2P0C7V8 631 aa38.66■■■■□ 3.78
ACTR1B-201ENST00000289228 DCAF1Q9Y4B6 1507 aa38.47■■■■□ 3.75
ACTR1B-201ENST00000289228 CHIC1Q5VXU3 224 aa38.12■■■■□ 3.69
ACTR1B-201ENST00000289228 MYO15BQ96JP2 1530 aa37.97■■■■□ 3.67
ACTR1B-201ENST00000289228 ABCC9O60706 1549 aa37.41■■■■□ 3.58
ACTR1B-201ENST00000289228 SCRIBQ14160 1630 aa37.25■■■■□ 3.55
ACTR1B-201ENST00000289228 HRCP23327 699 aa37.1■■■■□ 3.53
ACTR1B-201ENST00000289228 RSF1Q96T23 1441 aaPredicted RBP37.04■■■■□ 3.52
ACTR1B-201ENST00000289228 PCGF6Q9BYE7 350 aa36.98■■■■□ 3.51
ACTR1B-201ENST00000289228 LOC105371045A0A1W2PR82 267 aa36.94■■■■□ 3.5
ACTR1B-201ENST00000289228 NACADO15069 1562 aa36.79■■■■□ 3.48
ACTR1B-201ENST00000289228 RB1CC1Q8TDY2 1594 aa36.7■■■■□ 3.47
ACTR1B-201ENST00000289228 TRIM41Q8WV44 630 aa36.49■■■■□ 3.43
ACTR1B-201ENST00000289228 CECR2Q9BXF3 1484 aa36.45■■■■□ 3.43
ACTR1B-201ENST00000289228 MROH2BQ7Z745 1585 aa36.36■■■■□ 3.41
ACTR1B-201ENST00000289228 TRIM26Q12899 539 aaPredicted RBP36.34■■■■□ 3.41
ACTR1B-201ENST00000289228 PPARGC1BQ86YN6 1023 aaKnown RBP36.22■■■■□ 3.39
ACTR1B-201ENST00000289228 WIZO95785 1651 aa36.18■■■■□ 3.38
ACTR1B-201ENST00000289228 FAM9AQ8IZU1 332 aaPredicted RBP36.12■■■■□ 3.37
ACTR1B-201ENST00000289228 BAZ1AQ9NRL2 1556 aaPredicted RBP36.02■■■■□ 3.36
ACTR1B-201ENST00000289228 EIF4G1Q04637 1599 aaKnown RBP35.76■■■■□ 3.32
ACTR1B-201ENST00000289228 EHMT2Q96KQ7 1210 aa35.75■■■■□ 3.31
ACTR1B-201ENST00000289228 TOP2AP11388 1531 aaKnown RBP35.66■■■■□ 3.3
ACTR1B-201ENST00000289228 SMARCA4P51532 1647 aa35.64■■■■□ 3.3
ACTR1B-201ENST00000289228 ZEB1P37275 1124 aaPredicted RBP35.63■■■■□ 3.29
ACTR1B-201ENST00000289228 UNC13AQ9UPW8 1703 aa35.61■■■■□ 3.29
ACTR1B-201ENST00000289228 CCDC88BA6NC98 1476 aa35.47■■■■□ 3.27
ACTR1B-201ENST00000289228 SMARCA2P51531 1590 aa35.45■■■■□ 3.27
ACTR1B-201ENST00000289228 ABCC8Q09428 1581 aa35.38■■■■□ 3.25
ACTR1B-201ENST00000289228 BICRAQ9NZM4 1560 aa35.13■■■■□ 3.22
ACTR1B-201ENST00000289228 PABPN1Q86U42 306 aaKnown RBP eCLIP35.08■■■■□ 3.216e-6■■□□□ 12.8
ACTR1B-201ENST00000289228 SOGA1O94964 1423 aa35.05■■■■□ 3.2
ACTR1B-201ENST00000289228 EEA1Q15075 1411 aa34.99■■■■□ 3.19
ACTR1B-201ENST00000289228 WRNQ14191 1432 aaPredicted RBP eCLIP34.99■■■■□ 3.19
ACTR1B-201ENST00000289228 PEG3Q9GZU2 1588 aa34.98■■■■□ 3.19
ACTR1B-201ENST00000289228 CEP162Q5TB80 1403 aa34.96■■■■□ 3.19
ACTR1B-201ENST00000289228 TNIKQ9UKE5 1360 aa34.94■■■■□ 3.18
ACTR1B-201ENST00000289228 CSRNP3Q8WYN3 585 aa34.89■■■■□ 3.18
ACTR1B-201ENST00000289228 RUSC2Q8N2Y8 1516 aa34.86■■■■□ 3.17
ACTR1B-201ENST00000289228 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.8■■■■□ 3.16
ACTR1B-201ENST00000289228 CCER1Q8TC90 406 aaPredicted RBP34.76■■■■□ 3.16
ACTR1B-201ENST00000289228 UBTFP17480 764 aaKnown RBP34.74■■■■□ 3.15
ACTR1B-201ENST00000289228 GOLGA3Q08378 1498 aa34.73■■■■□ 3.15
ACTR1B-201ENST00000289228 ATAD2BQ9ULI0 1458 aa34.68■■■■□ 3.14
ACTR1B-201ENST00000289228 TTBK1Q5TCY1 1321 aaPredicted RBP34.64■■■■□ 3.14
ACTR1B-201ENST00000289228 SYNJ1O43426 1573 aa34.63■■■■□ 3.13
ACTR1B-201ENST00000289228 BAZ1BQ9UIG0 1483 aaKnown RBP34.6■■■■□ 3.13
ACTR1B-201ENST00000289228 CEP164Q9UPV0 1460 aa34.52■■■■□ 3.12
ACTR1B-201ENST00000289228 KIF21BO75037 1637 aa34.51■■■■□ 3.11
ACTR1B-201ENST00000289228 CLIP1P30622 1438 aa34.3■■■■□ 3.08
ACTR1B-201ENST00000289228 TOP2BQ02880 1626 aa34.24■■■■□ 3.07
ACTR1B-201ENST00000289228 RAPGEF2Q9Y4G8 1499 aa34.21■■■■□ 3.07
ACTR1B-201ENST00000289228 VPS8Q8N3P4 1428 aa34.18■■■■□ 3.06
ACTR1B-201ENST00000289228 SCAF1Q9H7N4 1312 aaKnown RBP34.17■■■■□ 3.06
ACTR1B-201ENST00000289228 BIVM-ERCC5R4GMW8 1640 aa34.13■■■■□ 3.05
ACTR1B-201ENST00000289228 DIEXFQ68CQ4 756 aaKnown RBP34.12■■■■□ 3.05
ACTR1B-201ENST00000289228 HMGXB3Q12766 1538 aa34.04■■■■□ 3.04
ACTR1B-201ENST00000289228 APLP2Q06481 763 aa34.03■■■■□ 3.04
ACTR1B-201ENST00000289228 NCAPD3P42695 1498 aa34.01■■■■□ 3.03
ACTR1B-201ENST00000289228 HNRNPUL2Q1KMD3 747 aaKnown RBP33.98■■■■□ 3.03
ACTR1B-201ENST00000289228 RANGAP1P46060 587 aaPredicted RBP33.95■■■■□ 3.02
ACTR1B-201ENST00000289228 ERICH3Q5RHP9 1530 aa33.94■■■■□ 3.02
ACTR1B-201ENST00000289228 PRXQ9BXM0 1461 aa33.9■■■■□ 3.02
ACTR1B-201ENST00000289228 ACIN1Q9UKV3 1341 aaKnown RBP33.89■■■■□ 3.02
ACTR1B-201ENST00000289228 ZNF316A6NFI3 1004 aaPredicted RBP33.88■■■■□ 3.01
ACTR1B-201ENST00000289228 CUX1P39880 1505 aa33.86■■■■□ 3.01
ACTR1B-201ENST00000289228 NEUROD1Q13562 356 aa33.79■■■■□ 3
ACTR1B-201ENST00000289228 CFTRP13569 1480 aa33.76■■■□□ 2.99
ACTR1B-201ENST00000289228 ARAP1Q96P48 1450 aa33.75■■■□□ 2.99
ACTR1B-201ENST00000289228 KIF27Q86VH2 1401 aa33.74■■■□□ 2.99
ACTR1B-201ENST00000289228 CENPBP07199 599 aaPredicted RBP33.73■■■□□ 2.99
ACTR1B-201ENST00000289228 PELP1Q8IZL8 1130 aaKnown RBP33.63■■■□□ 2.97
ACTR1B-201ENST00000289228 PRDM2Q13029 1718 aa33.56■■■□□ 2.96
ACTR1B-201ENST00000289228 KANK4Q5T7N3 995 aaPredicted RBP33.52■■■□□ 2.96
ACTR1B-201ENST00000289228 GTF3C3Q9Y5Q9 886 aa33.47■■■□□ 2.95
ACTR1B-201ENST00000289228 ARHGAP35Q9NRY4 1499 aa33.44■■■□□ 2.94
ACTR1B-201ENST00000289228 CLSPNQ9HAW4 1339 aa33.43■■■□□ 2.94
ACTR1B-201ENST00000289228 RRBP1Q9P2E9 1410 aaKnown RBP33.4■■■□□ 2.94
ACTR1B-201ENST00000289228 DHX57Q6P158 1386 aaKnown RBP33.39■■■□□ 2.94
ACTR1B-201ENST00000289228 CUX2O14529 1486 aa33.38■■■□□ 2.93
ACTR1B-201ENST00000289228 CADPSQ9ULU8 1353 aa33.35■■■□□ 2.93
ACTR1B-201ENST00000289228 MIER1Q8N108 512 aa33.35■■■□□ 2.93
ACTR1B-201ENST00000289228 IGF1RP08069 1367 aa33.34■■■□□ 2.93
ACTR1B-201ENST00000289228 YTHDC1Q96MU7 727 aaKnown RBP33.25■■■□□ 2.91
ACTR1B-201ENST00000289228 CCNB3Q8WWL7 1395 aa33.25■■■□□ 2.91
ACTR1B-201ENST00000289228 FGD5Q6ZNL6 1462 aa33.24■■■□□ 2.91
ACTR1B-201ENST00000289228 CARMIL1Q5VZK9 1371 aa33.2■■■□□ 2.91
ACTR1B-201ENST00000289228 MAP3K1Q13233 1512 aa33.13■■■□□ 2.89
ACTR1B-201ENST00000289228 TIAM1Q13009 1591 aa33.13■■■□□ 2.89
ACTR1B-201ENST00000289228 CC2D2AQ9P2K1 1620 aa33.09■■■□□ 2.89
ACTR1B-201ENST00000289228 ITGAEP38570 1179 aa33.04■■■□□ 2.88
ACTR1B-201ENST00000289228 FANCD2Q9BXW9 1451 aa33.04■■■□□ 2.88
ACTR1B-201ENST00000289228 LRRC9Q6ZRR7 1453 aa32.98■■■□□ 2.87
ACTR1B-201ENST00000289228 FHAD1B1AJZ9 1412 aa32.96■■■□□ 2.87
ACTR1B-201ENST00000289228 RAB3GAP2Q9H2M9 1393 aa32.93■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms