RNA–Protein interactions for RNA: ENST00000610452.1

COL15A1-205, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL15A1, Length 5,422 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-205ENST00000610452 PELP1Q8IZL8 1130 aaKnown RBP32.85■■■□□ 2.85
COL15A1-205ENST00000610452 DCAF8L2P0C7V8 631 aa32.74■■■□□ 2.83
COL15A1-205ENST00000610452 MYT1Q01538 1121 aa32.61■■■□□ 2.81
COL15A1-205ENST00000610452 SUPT5HO00267 1087 aaKnown RBP32.22■■■□□ 2.75
COL15A1-205ENST00000610452 NISCHQ9Y2I1 1504 aa31.88■■■□□ 2.69
COL15A1-205ENST00000610452 CENPBP07199 599 aaPredicted RBP31.76■■■□□ 2.67
COL15A1-205ENST00000610452 PCGF6Q9BYE7 350 aa31.71■■■□□ 2.67
COL15A1-205ENST00000610452 ERICH6Q7L0X2 663 aa31.56■■■□□ 2.64
COL15A1-205ENST00000610452 SHROOM4Q9ULL8 1493 aa31.32■■■□□ 2.6
COL15A1-205ENST00000610452 ZEB1P37275 1124 aaPredicted RBP31.31■■■□□ 2.6
COL15A1-205ENST00000610452 CCER1Q8TC90 406 aaPredicted RBP31.23■■■□□ 2.59
COL15A1-205ENST00000610452 EHMT2Q96KQ7 1210 aa31.22■■■□□ 2.59
COL15A1-205ENST00000610452 HRCP23327 699 aa30.77■■■□□ 2.52
COL15A1-205ENST00000610452 YTHDC1Q96MU7 727 aaKnown RBP30.72■■■□□ 2.51
COL15A1-205ENST00000610452 APLP2Q06481 763 aa30.6■■■□□ 2.49
COL15A1-205ENST00000610452 NEFLP07196 543 aa30.57■■■□□ 2.48
COL15A1-205ENST00000610452 TTBK1Q5TCY1 1321 aaPredicted RBP30.46■■■□□ 2.47
COL15A1-205ENST00000610452 FAM9AQ8IZU1 332 aaPredicted RBP30.4■■■□□ 2.46
COL15A1-205ENST00000610452 PPARGC1BQ86YN6 1023 aaKnown RBP30.07■■■□□ 2.4
COL15A1-205ENST00000610452 TRIM26Q12899 539 aaPredicted RBP30.07■■■□□ 2.4
COL15A1-205ENST00000610452 TRIM41Q8WV44 630 aa29.68■■■□□ 2.34
COL15A1-205ENST00000610452 GTF3C3Q9Y5Q9 886 aa29.66■■■□□ 2.34
COL15A1-205ENST00000610452 DAXXQ9UER7 740 aaPredicted RBP29.64■■■□□ 2.34
COL15A1-205ENST00000610452 RTL5Q5HYW3 569 aaPredicted RBP29.62■■■□□ 2.33
COL15A1-205ENST00000610452 DIEXFQ68CQ4 756 aaKnown RBP29.51■■■□□ 2.32
COL15A1-205ENST00000610452 RANGAP1P46060 587 aaPredicted RBP29.36■■■□□ 2.29
COL15A1-205ENST00000610452 UBTFP17480 764 aaKnown RBP29.23■■■□□ 2.27
COL15A1-205ENST00000610452 ACIN1Q9UKV3 1341 aaKnown RBP29.22■■■□□ 2.27
COL15A1-205ENST00000610452 LOC105371045A0A1W2PR82 267 aa29.1■■■□□ 2.25
COL15A1-205ENST00000610452 BCANQ96GW7 911 aa29.04■■■□□ 2.24
COL15A1-205ENST00000610452 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.03■■■□□ 2.24
COL15A1-205ENST00000610452 ZNF316A6NFI3 1004 aaPredicted RBP29.01■■■□□ 2.23
COL15A1-205ENST00000610452 CHIC1Q5VXU3 224 aa28.95■■■□□ 2.22
COL15A1-205ENST00000610452 ATP1B4Q9UN42 357 aaPredicted RBP28.92■■■□□ 2.22
COL15A1-205ENST00000610452 CDK11AQ9UQ88 783 aaPredicted RBP28.86■■■□□ 2.21
COL15A1-205ENST00000610452 HNRNPUL2Q1KMD3 747 aaKnown RBP28.8■■■□□ 2.2
COL15A1-205ENST00000610452 EIF5BO60841 1220 aaKnown RBP28.79■■■□□ 2.2
COL15A1-205ENST00000610452 SCAF1Q9H7N4 1312 aaKnown RBP28.66■■■□□ 2.18
COL15A1-205ENST00000610452 POLR3GLQ9BT43 218 aa28.6■■■□□ 2.17
COL15A1-205ENST00000610452 CLSPNQ9HAW4 1339 aa28.59■■■□□ 2.17
COL15A1-205ENST00000610452 ITGAEP38570 1179 aa28.58■■■□□ 2.17
COL15A1-205ENST00000610452 GLIPR1L2Q4G1C9 344 aa28.56■■■□□ 2.16
COL15A1-205ENST00000610452 MYT1LQ9UL68 1186 aa28.53■■■□□ 2.16
COL15A1-205ENST00000610452 CNGB1Q14028 1251 aaPredicted RBP28.5■■■□□ 2.15
COL15A1-205ENST00000610452 NEUROD1Q13562 356 aa28.45■■■□□ 2.14
COL15A1-205ENST00000610452 ANP32AP39687 249 aaKnown RBP28.4■■■□□ 2.14
COL15A1-205ENST00000610452 ANP32CO43423 234 aa28.25■■■□□ 2.11
COL15A1-205ENST00000610452 FKBP8Q14318 412 aa28.19■■■□□ 2.1
COL15A1-205ENST00000610452 ANP32EQ9BTT0 268 aa28.16■■■□□ 2.1
COL15A1-205ENST00000610452 NPM2Q86SE8 214 aaKnown RBP28.07■■■□□ 2.08
COL15A1-205ENST00000610452 NBR1Q14596 966 aa28.06■■■□□ 2.08
COL15A1-205ENST00000610452 BCL11AQ9H165 835 aa28.03■■■□□ 2.08
COL15A1-205ENST00000610452 ZBTB47Q9UFB7 747 aaPredicted RBP27.85■■■□□ 2.05
COL15A1-205ENST00000610452 ANP32BQ92688 251 aaKnown RBP27.78■■■□□ 2.04
COL15A1-205ENST00000610452 FAM50AQ14320 339 aaKnown RBP27.65■■■□□ 2.02
COL15A1-205ENST00000610452 DCAF1Q9Y4B6 1507 aa27.59■■■□□ 2.01
COL15A1-205ENST00000610452 MIER1Q8N108 512 aa27.58■■■□□ 2
COL15A1-205ENST00000610452 HNRNPUQ00839 825 aaKnown RBP eCLIP27.55■■■□□ 2
COL15A1-205ENST00000610452 SLC4A1APQ9BWU0 796 aaKnown RBP27.54■■■□□ 2
COL15A1-205ENST00000610452 CANXP27824 592 aaKnown RBP27.5■■□□□ 1.99
COL15A1-205ENST00000610452 TRIM52Q96A61 297 aa27.49■■□□□ 1.99
COL15A1-205ENST00000610452 CCDC136Q96JN2 1154 aa27.46■■□□□ 1.99
COL15A1-205ENST00000610452 ARXQ96QS3 562 aa27.46■■□□□ 1.99
COL15A1-205ENST00000610452 RTN4Q9NQC3 1192 aaKnown RBP27.45■■□□□ 1.99
COL15A1-205ENST00000610452 DDX10Q13206 875 aaKnown RBP27.36■■□□□ 1.97
COL15A1-205ENST00000610452 UPF2Q9HAU5 1272 aaKnown RBP27.36■■□□□ 1.97
COL15A1-205ENST00000610452 HSP90AA1P07900 732 aaKnown RBP27.34■■□□□ 1.97
COL15A1-205ENST00000610452 ERICH6BQ5W0A0 696 aa27.31■■□□□ 1.96
COL15A1-205ENST00000610452 NEFMP07197 916 aa27.31■■□□□ 1.96
COL15A1-205ENST00000610452 ZNF326Q5BKZ1 582 aaKnown RBP27.31■■□□□ 1.96
COL15A1-205ENST00000610452 IRX6P78412 446 aaPredicted RBP27.31■■□□□ 1.96
COL15A1-205ENST00000610452 TNNT2P45379 298 aaPredicted RBP27.26■■□□□ 1.95
COL15A1-205ENST00000610452 FAM9BQ8IZU0 186 aa27.25■■□□□ 1.95
COL15A1-205ENST00000610452 DEKP35659 375 aaKnown RBP27.21■■□□□ 1.95
COL15A1-205ENST00000610452 TRIM44Q96DX7 344 aaPredicted RBP27.17■■□□□ 1.94
COL15A1-205ENST00000610452 SUPT16HQ9Y5B9 1047 aaKnown RBP27.17■■□□□ 1.94
COL15A1-205ENST00000610452 DDRGK1Q96HY6 314 aa27.16■■□□□ 1.94
COL15A1-205ENST00000610452 NAP1L5Q96NT1 182 aaPredicted RBP27.16■■□□□ 1.94
COL15A1-205ENST00000610452 CSRNP3Q8WYN3 585 aa27.14■■□□□ 1.94
COL15A1-205ENST00000610452 PPM1GO15355 546 aaPredicted RBP27.13■■□□□ 1.93
COL15A1-205ENST00000610452 NOP58Q9Y2X3 529 aaKnown RBP27.11■■□□□ 1.93
COL15A1-205ENST00000610452 LAS1LQ9Y4W2 734 aaKnown RBP26.97■■□□□ 1.91
COL15A1-205ENST00000610452 RBM19Q9Y4C8 960 aaKnown RBP26.95■■□□□ 1.9
COL15A1-205ENST00000610452 TONSLQ96HA7 1378 aa26.94■■□□□ 1.9
COL15A1-205ENST00000610452 BECN1Q14457 450 aa26.93■■□□□ 1.9
COL15A1-205ENST00000610452 SALL2Q9Y467 1007 aaPredicted RBP26.93■■□□□ 1.9
COL15A1-205ENST00000610452 MRS2Q9HD23 443 aa26.92■■□□□ 1.9
COL15A1-205ENST00000610452 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.91■■□□□ 1.9
COL15A1-205ENST00000610452 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.89■■□□□ 1.9
COL15A1-205ENST00000610452 CDK11BP21127 795 aaKnown RBP26.86■■□□□ 1.89
COL15A1-205ENST00000610452 TMC1Q8TDI8 760 aa26.84■■□□□ 1.89
COL15A1-205ENST00000610452 PPP4R2Q9NY27 417 aa26.81■■□□□ 1.88
COL15A1-205ENST00000610452 PABPN1Q86U42 306 aaKnown RBP eCLIP26.8■■□□□ 1.88
COL15A1-205ENST00000610452 TSHZ2Q9NRE2 1034 aa26.76■■□□□ 1.87
COL15A1-205ENST00000610452 CCDC180Q9P1Z9 1646 aa26.72■■□□□ 1.87
COL15A1-205ENST00000610452 GOLGA6L22H0YM25 854 aa26.71■■□□□ 1.87
COL15A1-205ENST00000610452 DNTTIP2Q5QJE6 756 aaKnown RBP26.7■■□□□ 1.87
COL15A1-205ENST00000610452 ABCC9O60706 1549 aa26.68■■□□□ 1.86
COL15A1-205ENST00000610452 MYO15BQ96JP2 1530 aa26.68■■□□□ 1.86
COL15A1-205ENST00000610452 PTMAP06454 111 aaKnown RBP26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms