RNA–Protein interactions for RNA: ENST00000372443.6

KCNMA1-209, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,059 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-209ENST00000372443 NISCHQ9Y2I1 1504 aa36.5■■■■□ 3.43
KCNMA1-209ENST00000372443 DCAF8L2P0C7V8 631 aa35.89■■■■□ 3.34
KCNMA1-209ENST00000372443 SUPT5HO00267 1087 aaKnown RBP34.8■■■■□ 3.16
KCNMA1-209ENST00000372443 SHROOM4Q9ULL8 1493 aa34.23■■■■□ 3.07
KCNMA1-209ENST00000372443 EHMT2Q96KQ7 1210 aa33.53■■■□□ 2.96
KCNMA1-209ENST00000372443 PCGF6Q9BYE7 350 aa32.93■■■□□ 2.86
KCNMA1-209ENST00000372443 FAM9AQ8IZU1 332 aaPredicted RBP32.78■■■□□ 2.84
KCNMA1-209ENST00000372443 TTBK1Q5TCY1 1321 aaPredicted RBP32.44■■■□□ 2.78
KCNMA1-209ENST00000372443 APLP2Q06481 763 aa32.37■■■□□ 2.77
KCNMA1-209ENST00000372443 PELP1Q8IZL8 1130 aaKnown RBP32.3■■■□□ 2.76
KCNMA1-209ENST00000372443 TRIM41Q8WV44 630 aa32.09■■■□□ 2.73
KCNMA1-209ENST00000372443 ZEB1P37275 1124 aaPredicted RBP31.96■■■□□ 2.71
KCNMA1-209ENST00000372443 CCER1Q8TC90 406 aaPredicted RBP31.92■■■□□ 2.7
KCNMA1-209ENST00000372443 RANGAP1P46060 587 aaPredicted RBP31.84■■■□□ 2.69
KCNMA1-209ENST00000372443 CENPBP07199 599 aaPredicted RBP31.81■■■□□ 2.68
KCNMA1-209ENST00000372443 PPARGC1BQ86YN6 1023 aaKnown RBP31.56■■■□□ 2.64
KCNMA1-209ENST00000372443 UBTFP17480 764 aaKnown RBP31.53■■■□□ 2.64
KCNMA1-209ENST00000372443 HRCP23327 699 aa31.5■■■□□ 2.63
KCNMA1-209ENST00000372443 TRIM26Q12899 539 aaPredicted RBP31.41■■■□□ 2.62
KCNMA1-209ENST00000372443 MYT1Q01538 1121 aa31.38■■■□□ 2.61
KCNMA1-209ENST00000372443 YTHDC1Q96MU7 727 aaKnown RBP31.36■■■□□ 2.61
KCNMA1-209ENST00000372443 LOC105371045A0A1W2PR82 267 aa31.35■■■□□ 2.61
KCNMA1-209ENST00000372443 CHIC1Q5VXU3 224 aa31.33■■■□□ 2.61
KCNMA1-209ENST00000372443 ATP1B4Q9UN42 357 aaPredicted RBP31.27■■■□□ 2.6
KCNMA1-209ENST00000372443 ABCC9O60706 1549 aa31.15■■■□□ 2.58
KCNMA1-209ENST00000372443 ERICH6Q7L0X2 663 aa31.05■■■□□ 2.56
KCNMA1-209ENST00000372443 CCDC180Q9P1Z9 1646 aa30.92■■■□□ 2.54
KCNMA1-209ENST00000372443 NEFLP07196 543 aa30.85■■■□□ 2.53
KCNMA1-209ENST00000372443 HNRNPUL2Q1KMD3 747 aaKnown RBP30.66■■■□□ 2.5
KCNMA1-209ENST00000372443 ITGAEP38570 1179 aa30.64■■■□□ 2.49
KCNMA1-209ENST00000372443 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.59■■■□□ 2.49
KCNMA1-209ENST00000372443 DIEXFQ68CQ4 756 aaKnown RBP30.36■■■□□ 2.45
KCNMA1-209ENST00000372443 ZCCHC6Q5VYS8 1495 aaKnown RBP30.3■■■□□ 2.44
KCNMA1-209ENST00000372443 PABPN1Q86U42 306 aaKnown RBP eCLIP30.25■■■□□ 2.43
KCNMA1-209ENST00000372443 POLR3GLQ9BT43 218 aa30.12■■■□□ 2.41
KCNMA1-209ENST00000372443 CNGB1Q14028 1251 aaPredicted RBP30.05■■■□□ 2.4
KCNMA1-209ENST00000372443 RB1CC1Q8TDY2 1594 aa29.94■■■□□ 2.38
KCNMA1-209ENST00000372443 GTF3C3Q9Y5Q9 886 aa29.93■■■□□ 2.38
KCNMA1-209ENST00000372443 NACADO15069 1562 aa29.81■■■□□ 2.36
KCNMA1-209ENST00000372443 SCRIBQ14160 1630 aa29.77■■■□□ 2.36
KCNMA1-209ENST00000372443 FAM50AQ14320 339 aaKnown RBP29.76■■■□□ 2.35
KCNMA1-209ENST00000372443 NEUROD1Q13562 356 aa29.67■■■□□ 2.34
KCNMA1-209ENST00000372443 DAXXQ9UER7 740 aaPredicted RBP29.67■■■□□ 2.34
KCNMA1-209ENST00000372443 BCANQ96GW7 911 aa29.63■■■□□ 2.33
KCNMA1-209ENST00000372443 ZNF316A6NFI3 1004 aaPredicted RBP29.62■■■□□ 2.33
KCNMA1-209ENST00000372443 MYT1LQ9UL68 1186 aa29.6■■■□□ 2.33
KCNMA1-209ENST00000372443 ACIN1Q9UKV3 1341 aaKnown RBP29.54■■■□□ 2.32
KCNMA1-209ENST00000372443 DCAF1Q9Y4B6 1507 aa29.54■■■□□ 2.32
KCNMA1-209ENST00000372443 TRIM52Q96A61 297 aa29.46■■■□□ 2.31
KCNMA1-209ENST00000372443 CSRNP3Q8WYN3 585 aa29.41■■■□□ 2.3
KCNMA1-209ENST00000372443 ANP32CO43423 234 aa29.34■■■□□ 2.29
KCNMA1-209ENST00000372443 RTL5Q5HYW3 569 aaPredicted RBP29.29■■■□□ 2.28
KCNMA1-209ENST00000372443 SLC4A1APQ9BWU0 796 aaKnown RBP29.21■■■□□ 2.27
KCNMA1-209ENST00000372443 ZNF326Q5BKZ1 582 aaKnown RBP29.19■■■□□ 2.26
KCNMA1-209ENST00000372443 CLSPNQ9HAW4 1339 aa29.17■■■□□ 2.26
KCNMA1-209ENST00000372443 P3H3Q8IVL6 736 aa29.15■■■□□ 2.26
KCNMA1-209ENST00000372443 CDK11AQ9UQ88 783 aaPredicted RBP29.1■■■□□ 2.25
KCNMA1-209ENST00000372443 MYO15BQ96JP2 1530 aa29.03■■■□□ 2.24
KCNMA1-209ENST00000372443 ARID3CA6NKF2 412 aa28.93■■■□□ 2.22
KCNMA1-209ENST00000372443 SCAF1Q9H7N4 1312 aaKnown RBP28.89■■■□□ 2.22
KCNMA1-209ENST00000372443 FKBP8Q14318 412 aa28.83■■■□□ 2.21
KCNMA1-209ENST00000372443 DDX10Q13206 875 aaKnown RBP28.8■■■□□ 2.2
KCNMA1-209ENST00000372443 BAZ1AQ9NRL2 1556 aaPredicted RBP28.78■■■□□ 2.2
KCNMA1-209ENST00000372443 FBLN2P98095 1184 aa28.78■■■□□ 2.2
KCNMA1-209ENST00000372443 RSF1Q96T23 1441 aaPredicted RBP28.72■■■□□ 2.19
KCNMA1-209ENST00000372443 BAZ1BQ9UIG0 1483 aaKnown RBP28.72■■■□□ 2.19
KCNMA1-209ENST00000372443 MIER1Q8N108 512 aa28.71■■■□□ 2.19
KCNMA1-209ENST00000372443 HNRNPUQ00839 825 aaKnown RBP eCLIP28.65■■■□□ 2.18
KCNMA1-209ENST00000372443 TONSLQ96HA7 1378 aa28.65■■■□□ 2.18
KCNMA1-209ENST00000372443 ZNF777Q9ULD5 760 aaPredicted RBP28.62■■■□□ 2.17
KCNMA1-209ENST00000372443 ANP32AP39687 249 aaKnown RBP28.56■■■□□ 2.16
KCNMA1-209ENST00000372443 NPM2Q86SE8 214 aaKnown RBP28.53■■■□□ 2.16
KCNMA1-209ENST00000372443 FAM9BQ8IZU0 186 aa28.53■■■□□ 2.16
KCNMA1-209ENST00000372443 CANXP27824 592 aaKnown RBP28.49■■■□□ 2.15
KCNMA1-209ENST00000372443 HIRIP3Q9BW71 556 aaPredicted RBP28.46■■■□□ 2.15
KCNMA1-209ENST00000372443 BCL11AQ9H165 835 aa28.44■■■□□ 2.14
KCNMA1-209ENST00000372443 CHIC2Q9UKJ5 165 aa28.42■■■□□ 2.14
KCNMA1-209ENST00000372443 CLIP1P30622 1438 aa28.41■■■□□ 2.14
KCNMA1-209ENST00000372443 EEA1Q15075 1411 aa28.39■■■□□ 2.14
KCNMA1-209ENST00000372443 SALL2Q9Y467 1007 aaPredicted RBP28.35■■■□□ 2.13
KCNMA1-209ENST00000372443 SMARCA2P51531 1590 aa28.35■■■□□ 2.13
KCNMA1-209ENST00000372443 CEP162Q5TB80 1403 aa28.33■■■□□ 2.12
KCNMA1-209ENST00000372443 ZBTB47Q9UFB7 747 aaPredicted RBP28.32■■■□□ 2.12
KCNMA1-209ENST00000372443 IRX6P78412 446 aaPredicted RBP28.29■■■□□ 2.12
KCNMA1-209ENST00000372443 MRS2Q9HD23 443 aa28.24■■■□□ 2.11
KCNMA1-209ENST00000372443 CECR2Q9BXF3 1484 aa28.22■■■□□ 2.11
KCNMA1-209ENST00000372443 CCDC136Q96JN2 1154 aa28.21■■■□□ 2.11
KCNMA1-209ENST00000372443 WRNQ14191 1432 aaPredicted RBP eCLIP28.21■■■□□ 2.11
KCNMA1-209ENST00000372443 TMC1Q8TDI8 760 aa28.2■■■□□ 2.1
KCNMA1-209ENST00000372443 NPM1P06748 294 aaKnown RBP eCLIP28.15■■■□□ 2.1
KCNMA1-209ENST00000372443 MTUS2Q5JR59 1369 aa28.14■■■□□ 2.1
KCNMA1-209ENST00000372443 NEFMP07197 916 aa28.13■■■□□ 2.09
KCNMA1-209ENST00000372443 NBR1Q14596 966 aa28.13■■■□□ 2.09
KCNMA1-209ENST00000372443 CHMP7Q8WUX9 453 aaPredicted RBP28.13■■■□□ 2.09
KCNMA1-209ENST00000372443 GOLGA3Q08378 1498 aa28.12■■■□□ 2.09
KCNMA1-209ENST00000372443 SLC24A1O60721 1099 aa28.1■■■□□ 2.09
KCNMA1-209ENST00000372443 ERCC6Q03468 1493 aa28.09■■■□□ 2.09
KCNMA1-209ENST00000372443 KDM2AQ9Y2K7 1162 aa28.06■■■□□ 2.08
KCNMA1-209ENST00000372443 KIF27Q86VH2 1401 aa28.06■■■□□ 2.08
KCNMA1-209ENST00000372443 RRP7BPQ9NSQ0 103 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms