Protein–RNA interactions for Protein: Q6ZWI9

RFPL4B, Ret finger protein-like 4B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4BQ6ZWI9 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFPL4BQ6ZWI9 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFPL4BQ6ZWI9 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFPL4BQ6ZWI9 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFPL4BQ6ZWI9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RFPL4BQ6ZWI9 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
RFPL4BQ6ZWI9 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RFPL4BQ6ZWI9 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.14■□□□□ 0.97
RFPL4BQ6ZWI9 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.14■□□□□ 0.97
RFPL4BQ6ZWI9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.14■□□□□ 0.97
RFPL4BQ6ZWI9 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RFPL4BQ6ZWI9 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.14■□□□□ 0.97
RFPL4BQ6ZWI9 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.14■□□□□ 0.97
RFPL4BQ6ZWI9 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.13■□□□□ 0.97
RFPL4BQ6ZWI9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFPL4BQ6ZWI9 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFPL4BQ6ZWI9 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RFPL4BQ6ZWI9 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.13■□□□□ 0.97
RFPL4BQ6ZWI9 AC025884.2-201ENST00000553429 711 ntBASIC21.13■□□□□ 0.97
RFPL4BQ6ZWI9 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.13■□□□□ 0.97
RFPL4BQ6ZWI9 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFPL4BQ6ZWI9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFPL4BQ6ZWI9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RFPL4BQ6ZWI9 RNF126P1-201ENST00000567452 1320 ntBASIC21.12■□□□□ 0.97
RFPL4BQ6ZWI9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFPL4BQ6ZWI9 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.12■□□□□ 0.97
RFPL4BQ6ZWI9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.12■□□□□ 0.97
RFPL4BQ6ZWI9 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFPL4BQ6ZWI9 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RFPL4BQ6ZWI9 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFPL4BQ6ZWI9 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFPL4BQ6ZWI9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.11■□□□□ 0.97
RFPL4BQ6ZWI9 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
RFPL4BQ6ZWI9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RFPL4BQ6ZWI9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFPL4BQ6ZWI9 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RFPL4BQ6ZWI9 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.1■□□□□ 0.97
RFPL4BQ6ZWI9 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
RFPL4BQ6ZWI9 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RFPL4BQ6ZWI9 SMPD5-203ENST00000639008 1464 ntBASIC21.1■□□□□ 0.97
RFPL4BQ6ZWI9 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.1■□□□□ 0.97
RFPL4BQ6ZWI9 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
RFPL4BQ6ZWI9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFPL4BQ6ZWI9 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RFPL4BQ6ZWI9 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RFPL4BQ6ZWI9 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFPL4BQ6ZWI9 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RFPL4BQ6ZWI9 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFPL4BQ6ZWI9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.09■□□□□ 0.97
RFPL4BQ6ZWI9 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.09■□□□□ 0.97
RFPL4BQ6ZWI9 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFPL4BQ6ZWI9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RFPL4BQ6ZWI9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.09■□□□□ 0.97
RFPL4BQ6ZWI9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RFPL4BQ6ZWI9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFPL4BQ6ZWI9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
RFPL4BQ6ZWI9 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.08■□□□□ 0.97
RFPL4BQ6ZWI9 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFPL4BQ6ZWI9 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
RFPL4BQ6ZWI9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.08■□□□□ 0.97
RFPL4BQ6ZWI9 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFPL4BQ6ZWI9 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFPL4BQ6ZWI9 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFPL4BQ6ZWI9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RFPL4BQ6ZWI9 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.08■□□□□ 0.96
RFPL4BQ6ZWI9 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.08■□□□□ 0.96
RFPL4BQ6ZWI9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFPL4BQ6ZWI9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFPL4BQ6ZWI9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFPL4BQ6ZWI9 RARRES2P2-201ENST00000394842 485 ntBASIC21.07■□□□□ 0.96
RFPL4BQ6ZWI9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.07■□□□□ 0.96
RFPL4BQ6ZWI9 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.07■□□□□ 0.96
RFPL4BQ6ZWI9 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RFPL4BQ6ZWI9 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
RFPL4BQ6ZWI9 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RFPL4BQ6ZWI9 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFPL4BQ6ZWI9 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RFPL4BQ6ZWI9 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFPL4BQ6ZWI9 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
RFPL4BQ6ZWI9 AC007029.1-201ENST00000604183 313 ntBASIC21.06■□□□□ 0.96
RFPL4BQ6ZWI9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.06■□□□□ 0.96
RFPL4BQ6ZWI9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.06■□□□□ 0.96
RFPL4BQ6ZWI9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFPL4BQ6ZWI9 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFPL4BQ6ZWI9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFPL4BQ6ZWI9 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFPL4BQ6ZWI9 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.06■□□□□ 0.96
RFPL4BQ6ZWI9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.05■□□□□ 0.96
RFPL4BQ6ZWI9 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RFPL4BQ6ZWI9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RFPL4BQ6ZWI9 MIR3960-201ENST00000583311 91 ntBASIC21.05■□□□□ 0.96
RFPL4BQ6ZWI9 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RFPL4BQ6ZWI9 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.05■□□□□ 0.96
RFPL4BQ6ZWI9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RFPL4BQ6ZWI9 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RFPL4BQ6ZWI9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RFPL4BQ6ZWI9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFPL4BQ6ZWI9 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFPL4BQ6ZWI9 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFPL4BQ6ZWI9 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms