Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CDC42SE1Q9NRR8 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 USO1-201ENST00000264904 4135 ntTSL 2 BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 YBX1P1-201ENST00000445822 960 ntBASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 AC245052.3-201ENST00000450182 901 ntBASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 AC021231.2-201ENST00000594613 730 ntBASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 RAP2CP1-202ENST00000605179 643 ntBASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 LINC01451-201ENST00000623792 534 ntBASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 ME2P1-201ENST00000426028 1970 ntBASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 RET-205ENST00000615310 4337 ntTSL 5 BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CDC42SE1Q9NRR8 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CDC42SE1Q9NRR8 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms