RNA–Protein interactions for RNA: ENST00000308159.9

NUP93-201, Transcript of nucleoporin 93, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP93, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-201ENST00000308159 NISCHQ9Y2I1 1504 aa32.1■■■□□ 2.73
NUP93-201ENST00000308159 CCDC180Q9P1Z9 1646 aa27.42■■□□□ 1.98
NUP93-201ENST00000308159 SHROOM4Q9ULL8 1493 aa27.2■■□□□ 1.94
NUP93-201ENST00000308159 ZCCHC6Q5VYS8 1495 aaKnown RBP27.14■■□□□ 1.94
NUP93-201ENST00000308159 SUPT5HO00267 1087 aaKnown RBP26.6■■□□□ 1.85
NUP93-201ENST00000308159 DCAF8L2P0C7V8 631 aa26.52■■□□□ 1.84
NUP93-201ENST00000308159 DCAF1Q9Y4B6 1507 aa26.37■■□□□ 1.81
NUP93-201ENST00000308159 CHIC1Q5VXU3 224 aa25.85■■□□□ 1.73
NUP93-201ENST00000308159 MYO15BQ96JP2 1530 aa25.76■■□□□ 1.71
NUP93-201ENST00000308159 SCRIBQ14160 1630 aa25.62■■□□□ 1.69
NUP93-201ENST00000308159 ABCC9O60706 1549 aa25.61■■□□□ 1.69
NUP93-201ENST00000308159 RSF1Q96T23 1441 aaPredicted RBP25.33■■□□□ 1.65
NUP93-201ENST00000308159 NACADO15069 1562 aa25.33■■□□□ 1.65
NUP93-201ENST00000308159 RB1CC1Q8TDY2 1594 aa25.09■■□□□ 1.61
NUP93-201ENST00000308159 LOC105371045A0A1W2PR82 267 aa25.06■■□□□ 1.6
NUP93-201ENST00000308159 CECR2Q9BXF3 1484 aa25.03■■□□□ 1.6
NUP93-201ENST00000308159 MROH2BQ7Z745 1585 aa24.95■■□□□ 1.58
NUP93-201ENST00000308159 PCGF6Q9BYE7 350 aa24.9■■□□□ 1.58
NUP93-201ENST00000308159 WIZO95785 1651 aa24.84■■□□□ 1.57
NUP93-201ENST00000308159 HRCP23327 699 aa24.84■■□□□ 1.57
NUP93-201ENST00000308159 TRIM41Q8WV44 630 aa24.8■■□□□ 1.56
NUP93-201ENST00000308159 BAZ1AQ9NRL2 1556 aaPredicted RBP24.68■■□□□ 1.54
NUP93-201ENST00000308159 UNC13AQ9UPW8 1703 aa24.67■■□□□ 1.54
NUP93-201ENST00000308159 FAM9AQ8IZU1 332 aaPredicted RBP24.57■■□□□ 1.52
NUP93-201ENST00000308159 SMARCA4P51532 1647 aa24.5■■□□□ 1.51
NUP93-201ENST00000308159 EIF4G1Q04637 1599 aaKnown RBP24.48■■□□□ 1.51
NUP93-201ENST00000308159 TRIM26Q12899 539 aaPredicted RBP24.47■■□□□ 1.51
NUP93-201ENST00000308159 TOP2AP11388 1531 aaKnown RBP24.43■■□□□ 1.5
NUP93-201ENST00000308159 EHMT2Q96KQ7 1210 aa24.34■■□□□ 1.49
NUP93-201ENST00000308159 PPARGC1BQ86YN6 1023 aaKnown RBP24.33■■□□□ 1.49
NUP93-201ENST00000308159 SMARCA2P51531 1590 aa24.31■■□□□ 1.48
NUP93-201ENST00000308159 CCDC88BA6NC98 1476 aa24.3■■□□□ 1.48
NUP93-201ENST00000308159 BICRAQ9NZM4 1560 aa24.29■■□□□ 1.48
NUP93-201ENST00000308159 ABCC8Q09428 1581 aa24.21■■□□□ 1.47
NUP93-201ENST00000308159 PABPN1Q86U42 306 aaKnown RBP eCLIP24.21■■□□□ 1.47
NUP93-201ENST00000308159 PEG3Q9GZU2 1588 aa24.04■■□□□ 1.44
NUP93-201ENST00000308159 SOGA1O94964 1423 aa23.93■■□□□ 1.42
NUP93-201ENST00000308159 ZEB1P37275 1124 aaPredicted RBP23.87■■□□□ 1.41
NUP93-201ENST00000308159 ATAD2BQ9ULI0 1458 aa23.85■■□□□ 1.41
NUP93-201ENST00000308159 RUSC2Q8N2Y8 1516 aa23.84■■□□□ 1.41
NUP93-201ENST00000308159 EEA1Q15075 1411 aa23.8■■□□□ 1.4
NUP93-201ENST00000308159 WRNQ14191 1432 aaPredicted RBP eCLIP23.8■■□□□ 1.4
NUP93-201ENST00000308159 BAZ1BQ9UIG0 1483 aaKnown RBP23.78■■□□□ 1.4
NUP93-201ENST00000308159 CEP162Q5TB80 1403 aa23.77■■□□□ 1.4
NUP93-201ENST00000308159 CSRNP3Q8WYN3 585 aa23.76■■□□□ 1.39
NUP93-201ENST00000308159 TNIKQ9UKE5 1360 aa23.74■■□□□ 1.39
NUP93-201ENST00000308159 SYNJ1O43426 1573 aa23.73■■□□□ 1.39
NUP93-201ENST00000308159 GOLGA3Q08378 1498 aa23.64■■□□□ 1.37
NUP93-201ENST00000308159 UBTFP17480 764 aaKnown RBP23.63■■□□□ 1.37
NUP93-201ENST00000308159 TTBK1Q5TCY1 1321 aaPredicted RBP23.54■■□□□ 1.36
NUP93-201ENST00000308159 KIF21BO75037 1637 aa23.54■■□□□ 1.36
NUP93-201ENST00000308159 CEP164Q9UPV0 1460 aa23.52■■□□□ 1.36
NUP93-201ENST00000308159 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.51■■□□□ 1.35
NUP93-201ENST00000308159 TOP2BQ02880 1626 aa23.46■■□□□ 1.35
NUP93-201ENST00000308159 HMGXB3Q12766 1538 aa23.43■■□□□ 1.34
NUP93-201ENST00000308159 CCER1Q8TC90 406 aaPredicted RBP23.43■■□□□ 1.34
NUP93-201ENST00000308159 NCAPD3P42695 1498 aa23.41■■□□□ 1.34
NUP93-201ENST00000308159 BIVM-ERCC5R4GMW8 1640 aa23.4■■□□□ 1.34
NUP93-201ENST00000308159 RAPGEF2Q9Y4G8 1499 aa23.37■■□□□ 1.33
NUP93-201ENST00000308159 CLIP1P30622 1438 aa23.35■■□□□ 1.33
NUP93-201ENST00000308159 VPS8Q8N3P4 1428 aa23.24■■□□□ 1.31
NUP93-201ENST00000308159 CUX1P39880 1505 aa23.24■■□□□ 1.31
NUP93-201ENST00000308159 CFTRP13569 1480 aa23.2■■□□□ 1.3
NUP93-201ENST00000308159 RANGAP1P46060 587 aaPredicted RBP23.17■■□□□ 1.3
NUP93-201ENST00000308159 ERICH3Q5RHP9 1530 aa23.17■■□□□ 1.3
NUP93-201ENST00000308159 PRXQ9BXM0 1461 aa23.16■■□□□ 1.3
NUP93-201ENST00000308159 PRDM2Q13029 1718 aa23.13■■□□□ 1.29
NUP93-201ENST00000308159 APLP2Q06481 763 aa23.07■■□□□ 1.28
NUP93-201ENST00000308159 KIF27Q86VH2 1401 aa23.06■■□□□ 1.28
NUP93-201ENST00000308159 HNRNPUL2Q1KMD3 747 aaKnown RBP23.04■■□□□ 1.28
NUP93-201ENST00000308159 ARAP1Q96P48 1450 aa23.02■■□□□ 1.28
NUP93-201ENST00000308159 CADPSQ9ULU8 1353 aa22.93■■□□□ 1.26
NUP93-201ENST00000308159 CC2D2AQ9P2K1 1620 aa22.92■■□□□ 1.26
NUP93-201ENST00000308159 DIEXFQ68CQ4 756 aaKnown RBP22.91■■□□□ 1.26
NUP93-201ENST00000308159 CUX2O14529 1486 aa22.87■■□□□ 1.25
NUP93-201ENST00000308159 ARHGAP35Q9NRY4 1499 aa22.84■■□□□ 1.25
NUP93-201ENST00000308159 KANK4Q5T7N3 995 aaPredicted RBP22.83■■□□□ 1.25
NUP93-201ENST00000308159 FGD5Q6ZNL6 1462 aa22.83■■□□□ 1.24
NUP93-201ENST00000308159 IGF1RP08069 1367 aa22.82■■□□□ 1.24
NUP93-201ENST00000308159 SCAF1Q9H7N4 1312 aaKnown RBP22.8■■□□□ 1.24
NUP93-201ENST00000308159 ZNF316A6NFI3 1004 aaPredicted RBP22.78■■□□□ 1.24
NUP93-201ENST00000308159 FANCD2Q9BXW9 1451 aa22.73■■□□□ 1.23
NUP93-201ENST00000308159 CARMIL1Q5VZK9 1371 aa22.72■■□□□ 1.23
NUP93-201ENST00000308159 RRBP1Q9P2E9 1410 aaKnown RBP22.69■■□□□ 1.22
NUP93-201ENST00000308159 DNMBPQ6XZF7 1577 aa22.64■■□□□ 1.21
NUP93-201ENST00000308159 ACIN1Q9UKV3 1341 aaKnown RBP22.63■■□□□ 1.21
NUP93-201ENST00000308159 NESP48681 1621 aa22.62■■□□□ 1.21
NUP93-201ENST00000308159 NEUROD1Q13562 356 aa22.62■■□□□ 1.21
NUP93-201ENST00000308159 DHX57Q6P158 1386 aaKnown RBP22.62■■□□□ 1.21
NUP93-201ENST00000308159 RAD54L2Q9Y4B4 1467 aa22.6■■□□□ 1.21
NUP93-201ENST00000308159 TIAM1Q13009 1591 aa22.59■■□□□ 1.21
NUP93-201ENST00000308159 TOPBP1Q92547 1522 aa22.59■■□□□ 1.21
NUP93-201ENST00000308159 CCNB3Q8WWL7 1395 aa22.59■■□□□ 1.21
NUP93-201ENST00000308159 POLA1P09884 1462 aaPredicted RBP22.57■■□□□ 1.2
NUP93-201ENST00000308159 CLSPNQ9HAW4 1339 aa22.57■■□□□ 1.2
NUP93-201ENST00000308159 ABCA10Q8WWZ4 1543 aa22.56■■□□□ 1.2
NUP93-201ENST00000308159 MAP3K1Q13233 1512 aa22.55■■□□□ 1.2
NUP93-201ENST00000308159 CENPBP07199 599 aaPredicted RBP22.51■■□□□ 1.19
NUP93-201ENST00000308159 LRRC9Q6ZRR7 1453 aa22.48■■□□□ 1.19
NUP93-201ENST00000308159 PCF11O94913 1555 aaKnown RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms